RNA–Protein interactions for RNA: ENST00000376259.6

TNFRSF1B-201, Transcript of TNF receptor superfamily member 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1B, Length 3,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-201ENST00000376259 LCE6AA0A183 80 aa8.6□□□□□ -1.03
TNFRSF1B-201ENST00000376259 HRES1P13985 223 aa8.58□□□□□ -1.04
TNFRSF1B-201ENST00000376259 ACYP2P14621 99 aa8.58□□□□□ -1.04
TNFRSF1B-201ENST00000376259 A0A1B0GU69 56 aa8.58□□□□□ -1.04
TNFRSF1B-201ENST00000376259 SPINK7P58062 85 aa8.56□□□□□ -1.04
TNFRSF1B-201ENST00000376259 Q5W150 140 aa8.56□□□□□ -1.04
TNFRSF1B-201ENST00000376259 C7orf65Q6ZTY9 151 aa8.56□□□□□ -1.04
TNFRSF1B-201ENST00000376259 SMR3BP02814 79 aaPredicted RBP8.55□□□□□ -1.04
TNFRSF1B-201ENST00000376259 Q96NJ1 140 aa8.55□□□□□ -1.04
TNFRSF1B-201ENST00000376259 PLA2G1BP04054 148 aaKnown RBP8.53□□□□□ -1.04
TNFRSF1B-201ENST00000376259 Q6ZRN7 208 aaPredicted RBP8.53□□□□□ -1.04
TNFRSF1B-201ENST00000376259 FLG2Q5D862 2391 aaPredicted RBP8.52□□□□□ -1.05
TNFRSF1B-201ENST00000376259 DNAH10Q8IVF4 4471 aa8.51□□□□□ -1.05
TNFRSF1B-201ENST00000376259 KRTAP10-2P60368 255 aa8.51□□□□□ -1.05
TNFRSF1B-201ENST00000376259 LCA10Q71F78 164 aa8.51□□□□□ -1.05
TNFRSF1B-201ENST00000376259 Q8N1X5 172 aa8.5□□□□□ -1.05
TNFRSF1B-201ENST00000376259 MEGF8Q7Z7M0 2845 aa8.5□□□□□ -1.05
TNFRSF1B-201ENST00000376259 TYMSOSQ8TAI1 123 aa8.5□□□□□ -1.05
TNFRSF1B-201ENST00000376259 ATP11AUNQ6ZP68 121 aa8.48□□□□□ -1.05
TNFRSF1B-201ENST00000376259 C9orf92A6NGG3 77 aa8.47□□□□□ -1.05
TNFRSF1B-201ENST00000376259 FAM229AH3BQW9 127 aa8.47□□□□□ -1.05
TNFRSF1B-201ENST00000376259 KRTAP13-1Q8IUC0 172 aa8.47□□□□□ -1.05
TNFRSF1B-201ENST00000376259 PLAC8Q9NZF1 115 aa8.47□□□□□ -1.05
TNFRSF1B-201ENST00000376259 SSBP3-AS1Q7Z2R9 100 aa8.45□□□□□ -1.06
TNFRSF1B-201ENST00000376259 CMYA5Q8N3K9 4069 aa8.44□□□□□ -1.06
TNFRSF1B-201ENST00000376259 Q75L30 129 aa8.44□□□□□ -1.06
TNFRSF1B-201ENST00000376259 PRAC1Q96KF2 57 aa8.43□□□□□ -1.06
TNFRSF1B-201ENST00000376259 CDC42SE1Q9NRR8 79 aa8.43□□□□□ -1.06
TNFRSF1B-201ENST00000376259 KTN1-AS1Q86SY8 53 aa8.42□□□□□ -1.06
TNFRSF1B-201ENST00000376259 C8orf87E5RJ46 101 aa8.4□□□□□ -1.06
TNFRSF1B-201ENST00000376259 LINC01558Q9Y6Z2 57 aa8.4□□□□□ -1.06
TNFRSF1B-201ENST00000376259 LINC00483Q53H64 154 aa8.39□□□□□ -1.07
TNFRSF1B-201ENST00000376259 Q6ZR54 194 aa8.39□□□□□ -1.07
TNFRSF1B-201ENST00000376259 DNAH7Q8WXX0 4024 aa8.38□□□□□ -1.07
TNFRSF1B-201ENST00000376259 HUWE1Q7Z6Z7 4374 aaKnown RBP8.38□□□□□ -1.07
TNFRSF1B-201ENST00000376259 KRTAP10-1P60331 282 aa8.37□□□□□ -1.07
TNFRSF1B-201ENST00000376259 RBM12B-AS1Q9P1G2 102 aa8.35□□□□□ -1.07
TNFRSF1B-201ENST00000376259 DNHD1Q96M86 4753 aa8.35□□□□□ -1.07
TNFRSF1B-201ENST00000376259 MIR22HGQ0VDD5 57 aa8.33□□□□□ -1.08
TNFRSF1B-201ENST00000376259 UQCR11O14957 56 aa8.31□□□□□ -1.08
TNFRSF1B-201ENST00000376259 DNAH9Q9NYC9 4486 aa8.28□□□□□ -1.08
TNFRSF1B-201ENST00000376259 KRTAP13-2Q52LG2 175 aa8.27□□□□□ -1.08
TNFRSF1B-201ENST00000376259 LINC00304Q8N9R0 145 aa8.27□□□□□ -1.09
TNFRSF1B-201ENST00000376259 ADM2Q7Z4H4 148 aa8.26□□□□□ -1.09
TNFRSF1B-201ENST00000376259 PRKDCP78527 4128 aaKnown RBP8.25□□□□□ -1.09
TNFRSF1B-201ENST00000376259 PLECQ15149 4684 aaKnown RBP8.22□□□□□ -1.09
TNFRSF1B-201ENST00000376259 DMAC1Q96GE9 116 aa8.19□□□□□ -1.1
TNFRSF1B-201ENST00000376259 ASB16-AS1Q495Z4 193 aa8.17□□□□□ -1.1
TNFRSF1B-201ENST00000376259 A6NN06 94 aa8.17□□□□□ -1.1
TNFRSF1B-201ENST00000376259 CRIPTQ9P021 101 aa8.16□□□□□ -1.1
TNFRSF1B-201ENST00000376259 KMT2AQ03164 3969 aa8.16□□□□□ -1.1
TNFRSF1B-201ENST00000376259 STARD9Q9P2P6 4700 aa8.16□□□□□ -1.1
TNFRSF1B-201ENST00000376259 DNAH3Q8TD57 4116 aa8.1□□□□□ -1.11
TNFRSF1B-201ENST00000376259 K7ERS5 55 aa8.1□□□□□ -1.11
TNFRSF1B-201ENST00000376259 A0A0D9SG42 100 aa8.08□□□□□ -1.12
TNFRSF1B-201ENST00000376259 CSAG1Q6PB30 78 aa8.07□□□□□ -1.12
TNFRSF1B-201ENST00000376259 DNAH1Q9P2D7 4330 aa8.05□□□□□ -1.12
TNFRSF1B-201ENST00000376259 FRAS1Q86XX4 4008 aa8.01□□□□□ -1.13
TNFRSF1B-201ENST00000376259 SPATA8Q6RVD6 105 aa8.01□□□□□ -1.13
TNFRSF1B-201ENST00000376259 KRTAP1-4P0C5Y4 121 aa8□□□□□ -1.13
TNFRSF1B-201ENST00000376259 A0A1B0GU33 70 aa7.99□□□□□ -1.13
TNFRSF1B-201ENST00000376259 KRTAP13-3Q3SY46 172 aa7.98□□□□□ -1.13
TNFRSF1B-201ENST00000376259 LINC01554Q52M75 96 aa7.96□□□□□ -1.14
TNFRSF1B-201ENST00000376259 DNAH11Q96DT5 4516 aa7.95□□□□□ -1.14
TNFRSF1B-201ENST00000376259 KRTAP16-1A8MUX0 517 aa7.92□□□□□ -1.14
TNFRSF1B-201ENST00000376259 DNAH6Q9C0G6 4158 aa7.91□□□□□ -1.14
TNFRSF1B-201ENST00000376259 VPS13DQ5THJ4 4388 aa7.9□□□□□ -1.15
TNFRSF1B-201ENST00000376259 DNAH2Q9P225 4427 aa7.89□□□□□ -1.15
TNFRSF1B-201ENST00000376259 Q6ZSA8 131 aa7.87□□□□□ -1.15
TNFRSF1B-201ENST00000376259 DNAH8Q96JB1 4490 aa7.86□□□□□ -1.15
TNFRSF1B-201ENST00000376259 HYDINQ4G0P3 5121 aa7.85□□□□□ -1.15
TNFRSF1B-201ENST00000376259 SPINT4Q6UDR6 99 aa7.79□□□□□ -1.16
TNFRSF1B-201ENST00000376259 DNAH17Q9UFH2 4485 aa7.78□□□□□ -1.16
TNFRSF1B-201ENST00000376259 LRP1BQ9NZR2 4599 aa7.77□□□□□ -1.17
TNFRSF1B-201ENST00000376259 H1FX-AS1Q4G0G2 97 aa7.77□□□□□ -1.17
TNFRSF1B-201ENST00000376259 HECTD4Q9Y4D8 3996 aa7.76□□□□□ -1.17
TNFRSF1B-201ENST00000376259 H0YAA0 97 aa7.73□□□□□ -1.17
TNFRSF1B-201ENST00000376259 COX6B2Q6YFQ2 88 aa7.71□□□□□ -1.17
TNFRSF1B-201ENST00000376259 PKHD1P08F94 4074 aa7.7□□□□□ -1.18
TNFRSF1B-201ENST00000376259 FAT1Q14517 4588 aa7.68□□□□□ -1.18
TNFRSF1B-201ENST00000376259 H3BS24 57 aa7.67□□□□□ -1.18
TNFRSF1B-201ENST00000376259 Q5VSD8 79 aa7.67□□□□□ -1.18
TNFRSF1B-201ENST00000376259 A8MUU9 505 aa7.65□□□□□ -1.19
TNFRSF1B-201ENST00000376259 FAT2Q9NYQ8 4349 aa7.63□□□□□ -1.19
TNFRSF1B-201ENST00000376259 C20orf166-AS1Q96NR2 134 aa7.62□□□□□ -1.19
TNFRSF1B-201ENST00000376259 S4R3F8 94 aa7.62□□□□□ -1.19
TNFRSF1B-201ENST00000376259 KRTAP3-1Q9BYR8 98 aa7.6□□□□□ -1.19
TNFRSF1B-201ENST00000376259 DYNC2H1Q8NCM8 4307 aaKnown RBP7.6□□□□□ -1.19
TNFRSF1B-201ENST00000376259 DNAH5Q8TE73 4624 aa7.6□□□□□ -1.19
TNFRSF1B-201ENST00000376259 RPL37P61927 97 aaKnown RBP7.59□□□□□ -1.19
TNFRSF1B-201ENST00000376259 KRTAP25-1Q3LHN0 102 aa7.56□□□□□ -1.2
TNFRSF1B-201ENST00000376259 KMT2CQ8NEZ4 4911 aaKnown RBP7.54□□□□□ -1.2
TNFRSF1B-201ENST00000376259 RPS29P62273 56 aaKnown RBP7.53□□□□□ -1.2
TNFRSF1B-201ENST00000376259 MYCBP2O75592 4640 aa7.53□□□□□ -1.2
TNFRSF1B-201ENST00000376259 C10orf95Q9H7T3 257 aa7.53□□□□□ -1.2
TNFRSF1B-201ENST00000376259 VPS13BQ7Z7G8 4022 aa7.52□□□□□ -1.21
TNFRSF1B-201ENST00000376259 ROMO1P60602 79 aa7.51□□□□□ -1.21
TNFRSF1B-201ENST00000376259 ALMS1Q8TCU4 4167 aa7.47□□□□□ -1.21
TNFRSF1B-201ENST00000376259 P0C880 135 aa7.46□□□□□ -1.22
TNFRSF1B-201ENST00000376259 KRTAP10-8P60410 259 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms