RNA–Protein interactions for RNA: ENST00000375360.7

PTPDC1-202, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,517 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-202ENST00000375360 A0A087X002 238 aa10.69□□□□□ -0.7
PTPDC1-202ENST00000375360 Q5VSD8 79 aa10.69□□□□□ -0.7
PTPDC1-202ENST00000375360 SPANXA2-OT1Q8N9U9 137 aa10.65□□□□□ -0.7
PTPDC1-202ENST00000375360 SRRM2Q9UQ35 2752 aaKnown RBP10.64□□□□□ -0.71
PTPDC1-202ENST00000375360 HRES1P13985 223 aa10.64□□□□□ -0.71
PTPDC1-202ENST00000375360 UQCR11O14957 56 aa10.61□□□□□ -0.71
PTPDC1-202ENST00000375360 LINC00483Q53H64 154 aa10.6□□□□□ -0.71
PTPDC1-202ENST00000375360 Q6ZSA8 131 aa10.59□□□□□ -0.71
PTPDC1-202ENST00000375360 RBM12B-AS1Q9P1G2 102 aa10.58□□□□□ -0.72
PTPDC1-202ENST00000375360 CYP4F30PQ9H0H9 118 aa10.55□□□□□ -0.72
PTPDC1-202ENST00000375360 ZCCHC13Q8WW36 166 aaKnown RBP10.54□□□□□ -0.72
PTPDC1-202ENST00000375360 Q5W150 140 aa10.52□□□□□ -0.72
PTPDC1-202ENST00000375360 NOTCH2NLQ7Z3S9 236 aa10.5□□□□□ -0.73
PTPDC1-202ENST00000375360 MIR22HGQ0VDD5 57 aa10.5□□□□□ -0.73
PTPDC1-202ENST00000375360 LINC01554Q52M75 96 aa10.48□□□□□ -0.73
PTPDC1-202ENST00000375360 SPINK7P58062 85 aa10.48□□□□□ -0.73
PTPDC1-202ENST00000375360 KRTAP21-3Q3LHN1 58 aa10.47□□□□□ -0.73
PTPDC1-202ENST00000375360 A0A0D9SG42 100 aa10.45□□□□□ -0.74
PTPDC1-202ENST00000375360 BSNQ9UPA5 3926 aa10.44□□□□□ -0.74
PTPDC1-202ENST00000375360 KRTAP13-1Q8IUC0 172 aa10.41□□□□□ -0.74
PTPDC1-202ENST00000375360 KRTAP29-1A8MX34 341 aaPredicted RBP10.4□□□□□ -0.74
PTPDC1-202ENST00000375360 TRRAPQ9Y4A5 3859 aa10.38□□□□□ -0.75
PTPDC1-202ENST00000375360 KRTAP13-2Q52LG2 175 aa10.38□□□□□ -0.75
PTPDC1-202ENST00000375360 SPINT4Q6UDR6 99 aa10.33□□□□□ -0.76
PTPDC1-202ENST00000375360 FP248Q71RG6 208 aaPredicted RBP10.32□□□□□ -0.76
PTPDC1-202ENST00000375360 Q1T7F1 81 aa10.3□□□□□ -0.76
PTPDC1-202ENST00000375360 OXTP01178 125 aa10.25□□□□□ -0.77
PTPDC1-202ENST00000375360 M0R2T5 61 aa10.23□□□□□ -0.77
PTPDC1-202ENST00000375360 A0A1B0GU33 70 aa10.23□□□□□ -0.77
PTPDC1-202ENST00000375360 Q5XG85 94 aa10.21□□□□□ -0.78
PTPDC1-202ENST00000375360 CDC42SE1Q9NRR8 79 aa10.2□□□□□ -0.78
PTPDC1-202ENST00000375360 CSAG1Q6PB30 78 aa10.19□□□□□ -0.78
PTPDC1-202ENST00000375360 FBN3Q75N90 2809 aa10.18□□□□□ -0.78
PTPDC1-202ENST00000375360 LINC01558Q9Y6Z2 57 aa10.18□□□□□ -0.78
PTPDC1-202ENST00000375360 SEC61BP60468 96 aaKnown RBP10.18□□□□□ -0.78
PTPDC1-202ENST00000375360 S4R3F8 94 aa10.15□□□□□ -0.78
PTPDC1-202ENST00000375360 ASB16-AS1Q495Z4 193 aa10.15□□□□□ -0.79
PTPDC1-202ENST00000375360 ANK3Q12955 4377 aaKnown RBP10.12□□□□□ -0.79
PTPDC1-202ENST00000375360 DMAC1Q96GE9 116 aa10.12□□□□□ -0.79
PTPDC1-202ENST00000375360 Q75L30 129 aa10.11□□□□□ -0.79
PTPDC1-202ENST00000375360 CRIPTQ9P021 101 aa10.1□□□□□ -0.79
PTPDC1-202ENST00000375360 Q5VV11 94 aa10.1□□□□□ -0.79
PTPDC1-202ENST00000375360 COL7A1Q02388 2944 aa10.04□□□□□ -0.8
PTPDC1-202ENST00000375360 KRTAP1-4P0C5Y4 121 aa10.03□□□□□ -0.8
PTPDC1-202ENST00000375360 RPS29P62273 56 aaKnown RBP10.02□□□□□ -0.81
PTPDC1-202ENST00000375360 VPS13CQ709C8 3753 aa9.99□□□□□ -0.81
PTPDC1-202ENST00000375360 CAMK2N1Q7Z7J9 78 aa9.99□□□□□ -0.81
PTPDC1-202ENST00000375360 KTN1-AS1Q86SY8 53 aa9.98□□□□□ -0.81
PTPDC1-202ENST00000375360 R4GN34 69 aa9.96□□□□□ -0.81
PTPDC1-202ENST00000375360 MEGF8Q7Z7M0 2845 aa9.92□□□□□ -0.82
PTPDC1-202ENST00000375360 ZNF469Q96JG9 3925 aaPredicted RBP9.86□□□□□ -0.83
PTPDC1-202ENST00000375360 SPATA8Q6RVD6 105 aa9.86□□□□□ -0.83
PTPDC1-202ENST00000375360 LCA10Q71F78 164 aa9.83□□□□□ -0.84
PTPDC1-202ENST00000375360 PRAC1Q96KF2 57 aa9.83□□□□□ -0.84
PTPDC1-202ENST00000375360 RPL37P61927 97 aaKnown RBP9.82□□□□□ -0.84
PTPDC1-202ENST00000375360 M0QZ58 72 aa9.81□□□□□ -0.84
PTPDC1-202ENST00000375360 ADM2Q7Z4H4 148 aa9.81□□□□□ -0.84
PTPDC1-202ENST00000375360 H1FX-AS1Q4G0G2 97 aa9.78□□□□□ -0.84
PTPDC1-202ENST00000375360 A8MUU9 505 aa9.76□□□□□ -0.85
PTPDC1-202ENST00000375360 C20orf166-AS1Q96NR2 134 aa9.73□□□□□ -0.85
PTPDC1-202ENST00000375360 XP32Q5T750 250 aa9.65□□□□□ -0.86
PTPDC1-202ENST00000375360 A0A1B0GVY2 172 aa9.64□□□□□ -0.87
PTPDC1-202ENST00000375360 A8MU10 97 aa9.64□□□□□ -0.87
PTPDC1-202ENST00000375360 KRTAP16-1A8MUX0 517 aa9.55□□□□□ -0.88
PTPDC1-202ENST00000375360 CSMD3Q7Z407 3707 aa9.5□□□□□ -0.89
PTPDC1-202ENST00000375360 ROMO1P60602 79 aa9.48□□□□□ -0.89
PTPDC1-202ENST00000375360 KRTAP10-8P60410 259 aa9.46□□□□□ -0.9
PTPDC1-202ENST00000375360 KRTAP13-3Q3SY46 172 aa9.42□□□□□ -0.9
PTPDC1-202ENST00000375360 TPRXLQ17RH7 258 aa9.4□□□□□ -0.9
PTPDC1-202ENST00000375360 PLAC4Q8WY50 150 aa9.38□□□□□ -0.91
PTPDC1-202ENST00000375360 AKAP9Q99996 3911 aa9.36□□□□□ -0.91
PTPDC1-202ENST00000375360 LUZP6Q538Z0 58 aa9.33□□□□□ -0.92
PTPDC1-202ENST00000375360 HUWE1Q7Z6Z7 4374 aaKnown RBP9.31□□□□□ -0.92
PTPDC1-202ENST00000375360 A6NN06 94 aa9.26□□□□□ -0.93
PTPDC1-202ENST00000375360 DNHD1Q96M86 4753 aa9.26□□□□□ -0.93
PTPDC1-202ENST00000375360 P0C880 135 aa9.13□□□□□ -0.95
PTPDC1-202ENST00000375360 H0YAA0 97 aa9.1□□□□□ -0.95
PTPDC1-202ENST00000375360 KRTAP25-1Q3LHN0 102 aa9.04□□□□□ -0.96
PTPDC1-202ENST00000375360 DNAH9Q9NYC9 4486 aa9.04□□□□□ -0.96
PTPDC1-202ENST00000375360 KRTAP10-10P60014 251 aa8.98□□□□□ -0.97
PTPDC1-202ENST00000375360 MT1HL1P0DM35 61 aa8.93□□□□□ -0.98
PTPDC1-202ENST00000375360 KRTAP3-1Q9BYR8 98 aa8.93□□□□□ -0.98
PTPDC1-202ENST00000375360 KRTAP4-5Q9BYR2 181 aa8.93□□□□□ -0.98
PTPDC1-202ENST00000375360 C10orf95Q9H7T3 257 aa8.92□□□□□ -0.98
PTPDC1-202ENST00000375360 TNP1P09430 55 aa8.92□□□□□ -0.98
PTPDC1-202ENST00000375360 PLECQ15149 4684 aaKnown RBP8.91□□□□□ -0.98
PTPDC1-202ENST00000375360 KRTAP10-4P60372 401 aaPredicted RBP8.88□□□□□ -0.99
PTPDC1-202ENST00000375360 DNAH5Q8TE73 4624 aa8.85□□□□□ -0.99
PTPDC1-202ENST00000375360 DNAH11Q96DT5 4516 aa8.82□□□□□ -1
PTPDC1-202ENST00000375360 DNAH1Q9P2D7 4330 aa8.72□□□□□ -1.01
PTPDC1-202ENST00000375360 DNAH10Q8IVF4 4471 aa8.7□□□□□ -1.02
PTPDC1-202ENST00000375360 H3BS24 57 aa8.68□□□□□ -1.02
PTPDC1-202ENST00000375360 PRKDCP78527 4128 aaKnown RBP8.67□□□□□ -1.02
PTPDC1-202ENST00000375360 STARD9Q9P2P6 4700 aa8.65□□□□□ -1.02
PTPDC1-202ENST00000375360 FAT1Q14517 4588 aa8.65□□□□□ -1.03
PTPDC1-202ENST00000375360 KRTAP12-2P59991 146 aa8.62□□□□□ -1.03
PTPDC1-202ENST00000375360 A0A0A0MQY5 61 aa8.58□□□□□ -1.04
PTPDC1-202ENST00000375360 NDUFAF8A1L188 74 aa8.57□□□□□ -1.04
PTPDC1-202ENST00000375360 KRTAP10-6P60371 365 aaPredicted RBP8.53□□□□□ -1.04
PTPDC1-202ENST00000375360 VPS13DQ5THJ4 4388 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 288 ms