RNA–Protein interactions for RNA: ENST00000375023.3

NOTCH4-201, Transcript of notch 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOTCH4, Length 6,745 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH4-201ENST00000375023 KRTAP25-1Q3LHN0 102 aa8.17□□□□□ -1.1
NOTCH4-201ENST00000375023 UBR5O95071 2799 aaPredicted RBP8.17□□□□□ -1.1
NOTCH4-201ENST00000375023 C10orf95Q9H7T3 257 aa8.15□□□□□ -1.1
NOTCH4-201ENST00000375023 ATMQ13315 3056 aa8.15□□□□□ -1.11
NOTCH4-201ENST00000375023 NDUFAF8A1L188 74 aa8.12□□□□□ -1.11
NOTCH4-201ENST00000375023 USP34Q70CQ2 3546 aa8.11□□□□□ -1.11
NOTCH4-201ENST00000375023 COL12A1Q99715 3063 aa8.11□□□□□ -1.11
NOTCH4-201ENST00000375023 APCP25054 2843 aa8.1□□□□□ -1.11
NOTCH4-201ENST00000375023 MYO15AQ9UKN7 3530 aa8.1□□□□□ -1.11
NOTCH4-201ENST00000375023 IGSF10Q6WRI0 2623 aa8.1□□□□□ -1.11
NOTCH4-201ENST00000375023 KRTAP16-1A8MUX0 517 aa8.1□□□□□ -1.11
NOTCH4-201ENST00000375023 NSD1Q96L73 2696 aaPredicted RBP8.09□□□□□ -1.11
NOTCH4-201ENST00000375023 EYSQ5T1H1 3165 aa8.09□□□□□ -1.12
NOTCH4-201ENST00000375023 ADGRG4Q8IZF6 3080 aa8.08□□□□□ -1.12
NOTCH4-201ENST00000375023 HIVEP1P15822 2718 aa8.07□□□□□ -1.12
NOTCH4-201ENST00000375023 A6NN06 94 aa8.05□□□□□ -1.12
NOTCH4-201ENST00000375023 UTP20O75691 2785 aaKnown RBP8.05□□□□□ -1.12
NOTCH4-201ENST00000375023 ASB16-AS1Q495Z4 193 aa8.05□□□□□ -1.12
NOTCH4-201ENST00000375023 NBEAQ8NFP9 2946 aa8.04□□□□□ -1.12
NOTCH4-201ENST00000375023 TNP1P09430 55 aa8.03□□□□□ -1.12
NOTCH4-201ENST00000375023 KRTAP13-1Q8IUC0 172 aa8.02□□□□□ -1.13
NOTCH4-201ENST00000375023 RPS29P62273 56 aaKnown RBP8.01□□□□□ -1.13
NOTCH4-201ENST00000375023 ITPR1Q14643 2758 aa8.01□□□□□ -1.13
NOTCH4-201ENST00000375023 KMT2BQ9UMN6 2715 aaPredicted RBP8□□□□□ -1.13
NOTCH4-201ENST00000375023 ZZEF1O43149 2961 aa7.95□□□□□ -1.14
NOTCH4-201ENST00000375023 WDFY3Q8IZQ1 3526 aa7.94□□□□□ -1.14
NOTCH4-201ENST00000375023 KRTAP21-3Q3LHN1 58 aa7.94□□□□□ -1.14
NOTCH4-201ENST00000375023 ASPMQ8IZT6 3477 aa7.91□□□□□ -1.14
NOTCH4-201ENST00000375023 P0C880 135 aa7.9□□□□□ -1.15
NOTCH4-201ENST00000375023 CELSR2Q9HCU4 2923 aa7.85□□□□□ -1.15
NOTCH4-201ENST00000375023 XP32Q5T750 250 aa7.85□□□□□ -1.15
NOTCH4-201ENST00000375023 LOC400499M0QZD8 3231 aa7.8□□□□□ -1.16
NOTCH4-201ENST00000375023 DCHS1Q96JQ0 3298 aa7.8□□□□□ -1.16
NOTCH4-201ENST00000375023 PRO2289Q9P1D8 64 aa7.78□□□□□ -1.16
NOTCH4-201ENST00000375023 KRTAP1-4P0C5Y4 121 aa7.74□□□□□ -1.17
NOTCH4-201ENST00000375023 DMXL1Q9Y485 3027 aa7.74□□□□□ -1.17
NOTCH4-201ENST00000375023 DCHS2Q6V1P9 2916 aa7.71□□□□□ -1.18
NOTCH4-201ENST00000375023 H0YAA0 97 aa7.7□□□□□ -1.18
NOTCH4-201ENST00000375023 TNRC18O15417 2968 aaPredicted RBP7.7□□□□□ -1.18
NOTCH4-201ENST00000375023 TENM4Q6N022 2769 aa7.69□□□□□ -1.18
NOTCH4-201ENST00000375023 FLNCQ14315 2725 aa7.68□□□□□ -1.18
NOTCH4-201ENST00000375023 ZFHX4Q86UP3 3567 aa7.66□□□□□ -1.18
NOTCH4-201ENST00000375023 NBPF19A0A087WUL8 3843 aa7.65□□□□□ -1.18
NOTCH4-201ENST00000375023 RELNP78509 3460 aa7.64□□□□□ -1.19
NOTCH4-201ENST00000375023 CSMD1Q96PZ7 3565 aa7.61□□□□□ -1.19
NOTCH4-201ENST00000375023 LAMA5O15230 3695 aa7.59□□□□□ -1.19
NOTCH4-201ENST00000375023 CRCT1Q9UGL9 99 aa7.56□□□□□ -1.2
NOTCH4-201ENST00000375023 CELSR1Q9NYQ6 3014 aa7.54□□□□□ -1.2
NOTCH4-201ENST00000375023 FBN2P35556 2912 aa7.53□□□□□ -1.2
NOTCH4-201ENST00000375023 TPRXLQ17RH7 258 aa7.52□□□□□ -1.21
NOTCH4-201ENST00000375023 TENM1Q9UKZ4 2725 aa7.52□□□□□ -1.21
NOTCH4-201ENST00000375023 PP632Q6XCG6 107 aa7.51□□□□□ -1.21
NOTCH4-201ENST00000375023 ZANQ9Y493 2812 aa7.5□□□□□ -1.21
NOTCH4-201ENST00000375023 TENM2Q9NT68 2774 aa7.47□□□□□ -1.21
NOTCH4-201ENST00000375023 KRTAP13-3Q3SY46 172 aa7.47□□□□□ -1.21
NOTCH4-201ENST00000375023 NF1P21359 2839 aa7.43□□□□□ -1.22
NOTCH4-201ENST00000375023 HRNRQ86YZ3 2850 aaPredicted RBP7.42□□□□□ -1.22
NOTCH4-201ENST00000375023 NIPBLQ6KC79 2804 aaeCLIP7.38□□□□□ -1.23
NOTCH4-201ENST00000375023 KRTAP12-2P59991 146 aa7.35□□□□□ -1.23
NOTCH4-201ENST00000375023 TGP01266 2768 aa7.33□□□□□ -1.24
NOTCH4-201ENST00000375023 PKD1L1Q8TDX9 2849 aa7.33□□□□□ -1.24
NOTCH4-201ENST00000375023 VWFP04275 2813 aa7.31□□□□□ -1.24
NOTCH4-201ENST00000375023 SMG1Q96Q15 3661 aaKnown RBP7.29□□□□□ -1.24
NOTCH4-201ENST00000375023 DMDP11532 3685 aa7.28□□□□□ -1.24
NOTCH4-201ENST00000375023 CUBNO60494 3623 aa7.28□□□□□ -1.24
NOTCH4-201ENST00000375023 TENM3Q9P273 2699 aa7.26□□□□□ -1.25
NOTCH4-201ENST00000375023 SVEP1Q4LDE5 3571 aa7.25□□□□□ -1.25
NOTCH4-201ENST00000375023 ZFHX3Q15911 3703 aa7.21□□□□□ -1.26
NOTCH4-201ENST00000375023 SPENQ96T58 3664 aaKnown RBP7.2□□□□□ -1.26
NOTCH4-201ENST00000375023 MXRA5Q9NR99 2828 aa7.16□□□□□ -1.26
NOTCH4-201ENST00000375023 PDZD2O15018 2839 aa7.11□□□□□ -1.27
NOTCH4-201ENST00000375023 CSMD2Q7Z408 3487 aa7.09□□□□□ -1.27
NOTCH4-201ENST00000375023 KRTAP12-1P59990 96 aa7.06□□□□□ -1.28
NOTCH4-201ENST00000375023 LORP23490 312 aaPredicted RBP7.06□□□□□ -1.28
NOTCH4-201ENST00000375023 KRTAP13-4Q3LI77 160 aa7.04□□□□□ -1.28
NOTCH4-201ENST00000375023 KRTAP15-1Q3LI76 137 aa7.04□□□□□ -1.28
NOTCH4-201ENST00000375023 KRTAP3-1Q9BYR8 98 aa6.98□□□□□ -1.29
NOTCH4-201ENST00000375023 KRTAP4-5Q9BYR2 181 aa6.94□□□□□ -1.3
NOTCH4-201ENST00000375023 FBN1P35555 2871 aaKnown RBP6.87□□□□□ -1.31
NOTCH4-201ENST00000375023 MUC3AQ02505 3323 aa6.86□□□□□ -1.31
NOTCH4-201ENST00000375023 ANK3Q12955 4377 aaKnown RBP6.84□□□□□ -1.31
NOTCH4-201ENST00000375023 TRRAPQ9Y4A5 3859 aa6.82□□□□□ -1.32
NOTCH4-201ENST00000375023 SRRM2Q9UQ35 2752 aaKnown RBP6.82□□□□□ -1.32
NOTCH4-201ENST00000375023 FBN3Q75N90 2809 aa6.73□□□□□ -1.33
NOTCH4-201ENST00000375023 KRTAP10-6P60371 365 aaPredicted RBP6.73□□□□□ -1.33
NOTCH4-201ENST00000375023 MEGF8Q7Z7M0 2845 aa6.72□□□□□ -1.33
NOTCH4-201ENST00000375023 VPS13CQ709C8 3753 aa6.71□□□□□ -1.33
NOTCH4-201ENST00000375023 CSMD3Q7Z407 3707 aa6.71□□□□□ -1.34
NOTCH4-201ENST00000375023 COL7A1Q02388 2944 aa6.69□□□□□ -1.34
NOTCH4-201ENST00000375023 BSNQ9UPA5 3926 aa6.63□□□□□ -1.35
NOTCH4-201ENST00000375023 KRTAP10-12P60413 245 aa6.61□□□□□ -1.35
NOTCH4-201ENST00000375023 HUWE1Q7Z6Z7 4374 aaKnown RBP6.59□□□□□ -1.35
NOTCH4-201ENST00000375023 MT1HL1P0DM35 61 aa6.58□□□□□ -1.36
NOTCH4-201ENST00000375023 OTOGQ6ZRI0 2925 aa6.58□□□□□ -1.36
NOTCH4-201ENST00000375023 KRTAP8-1Q8IUC2 63 aa6.54□□□□□ -1.36
NOTCH4-201ENST00000375023 KRTAP3-3Q9BYR6 98 aa6.49□□□□□ -1.37
NOTCH4-201ENST00000375023 KRTAP3-2Q9BYR7 98 aa6.45□□□□□ -1.38
NOTCH4-201ENST00000375023 LCE3AQ5TA76 89 aa6.43□□□□□ -1.38
NOTCH4-201ENST00000375023 KRTAP10-5P60370 271 aa6.42□□□□□ -1.38
NOTCH4-201ENST00000375023 KRTAP12-3P60328 96 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms