RNA–Protein interactions for RNA: ENST00000373825.6

SRPK1-204, Transcript of SRSF protein kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRPK1, Length 4,592 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPK1-204ENST00000373825 SPRR1BP22528 89 aa9.22□□□□□ -0.93
SRPK1-204ENST00000373825 C9orf92A6NGG3 77 aa9.22□□□□□ -0.93
SRPK1-204ENST00000373825 KRTAP16-1A8MUX0 517 aa9.22□□□□□ -0.93
SRPK1-204ENST00000373825 NUPR2A6NF83 97 aa9.19□□□□□ -0.94
SRPK1-204ENST00000373825 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.17□□□□□ -0.94
SRPK1-204ENST00000373825 KRTAP7-1Q8IUC3 87 aa9.14□□□□□ -0.95
SRPK1-204ENST00000373825 NIPBLQ6KC79 2804 aaeCLIP9.12□□□□□ -0.95
SRPK1-204ENST00000373825 MXRA5Q9NR99 2828 aa9.1□□□□□ -0.95
SRPK1-204ENST00000373825 A0A0A0MQY5 61 aa9.1□□□□□ -0.95
SRPK1-204ENST00000373825 LUZP6Q538Z0 58 aa9.09□□□□□ -0.95
SRPK1-204ENST00000373825 IGSF10Q6WRI0 2623 aa9.08□□□□□ -0.96
SRPK1-204ENST00000373825 KRTAP1-3Q8IUG1 177 aa9.08□□□□□ -0.96
SRPK1-204ENST00000373825 KRTAP11-1Q8IUC1 163 aa9.08□□□□□ -0.96
SRPK1-204ENST00000373825 WWC2-AS2Q96NR7 200 aa9.08□□□□□ -0.96
SRPK1-204ENST00000373825 A8MUU9 505 aa9.07□□□□□ -0.96
SRPK1-204ENST00000373825 A0A087WTM6 91 aa9.04□□□□□ -0.96
SRPK1-204ENST00000373825 ITPR2Q14571 2701 aa9.03□□□□□ -0.96
SRPK1-204ENST00000373825 KRTAP1-5Q9BYS1 174 aa9.02□□□□□ -0.97
SRPK1-204ENST00000373825 PDZD2O15018 2839 aa9.02□□□□□ -0.97
SRPK1-204ENST00000373825 H1FX-AS1Q4G0G2 97 aa9.02□□□□□ -0.97
SRPK1-204ENST00000373825 PLAC8Q9NZF1 115 aa9□□□□□ -0.97
SRPK1-204ENST00000373825 RPL37P61927 97 aaKnown RBP9□□□□□ -0.97
SRPK1-204ENST00000373825 KRTAP24-1Q3LI83 254 aa8.99□□□□□ -0.97
SRPK1-204ENST00000373825 PANO1I0J062 215 aa8.99□□□□□ -0.97
SRPK1-204ENST00000373825 KRTAP1-1Q07627 177 aa8.99□□□□□ -0.97
SRPK1-204ENST00000373825 LINC00304Q8N9R0 145 aa8.96□□□□□ -0.98
SRPK1-204ENST00000373825 LINC00483Q53H64 154 aa8.89□□□□□ -0.99
SRPK1-204ENST00000373825 C20orf166-AS1Q96NR2 134 aa8.86□□□□□ -0.99
SRPK1-204ENST00000373825 TGP01266 2768 aa8.84□□□□□ -1
SRPK1-204ENST00000373825 KMT2BQ9UMN6 2715 aaPredicted RBP8.81□□□□□ -1
SRPK1-204ENST00000373825 Q6ZSA8 131 aa8.8□□□□□ -1
SRPK1-204ENST00000373825 C10orf95Q9H7T3 257 aa8.79□□□□□ -1
SRPK1-204ENST00000373825 SMR3BP02814 79 aaPredicted RBP8.78□□□□□ -1
SRPK1-204ENST00000373825 SRRM2Q9UQ35 2752 aaKnown RBP8.77□□□□□ -1.01
SRPK1-204ENST00000373825 TENM3Q9P273 2699 aa8.75□□□□□ -1.01
SRPK1-204ENST00000373825 H0YAA0 97 aa8.73□□□□□ -1.01
SRPK1-204ENST00000373825 BSNQ9UPA5 3926 aa8.71□□□□□ -1.01
SRPK1-204ENST00000373825 COX6B2Q6YFQ2 88 aa8.7□□□□□ -1.02
SRPK1-204ENST00000373825 ZFHX3Q15911 3703 aa8.68□□□□□ -1.02
SRPK1-204ENST00000373825 CSMD2Q7Z408 3487 aa8.68□□□□□ -1.02
SRPK1-204ENST00000373825 KRTAP13-1Q8IUC0 172 aa8.64□□□□□ -1.03
SRPK1-204ENST00000373825 PKD1L1Q8TDX9 2849 aa8.64□□□□□ -1.03
SRPK1-204ENST00000373825 VWFP04275 2813 aa8.6□□□□□ -1.03
SRPK1-204ENST00000373825 S4R3F8 94 aa8.59□□□□□ -1.03
SRPK1-204ENST00000373825 TENM4Q6N022 2769 aa8.57□□□□□ -1.04
SRPK1-204ENST00000373825 CAMK2N1Q7Z7J9 78 aa8.57□□□□□ -1.04
SRPK1-204ENST00000373825 P0C880 135 aa8.51□□□□□ -1.05
SRPK1-204ENST00000373825 VPS13CQ709C8 3753 aa8.5□□□□□ -1.05
SRPK1-204ENST00000373825 FBN1P35555 2871 aaKnown RBP8.48□□□□□ -1.05
SRPK1-204ENST00000373825 R4GN34 69 aa8.47□□□□□ -1.05
SRPK1-204ENST00000373825 TENM1Q9UKZ4 2725 aa8.46□□□□□ -1.05
SRPK1-204ENST00000373825 KRTAP13-2Q52LG2 175 aa8.45□□□□□ -1.06
SRPK1-204ENST00000373825 M0QZ58 72 aa8.41□□□□□ -1.06
SRPK1-204ENST00000373825 KRTAP13-3Q3SY46 172 aa8.41□□□□□ -1.06
SRPK1-204ENST00000373825 KRTAP10-2P60368 255 aa8.4□□□□□ -1.07
SRPK1-204ENST00000373825 OTOGQ6ZRI0 2925 aa8.4□□□□□ -1.07
SRPK1-204ENST00000373825 TENM2Q9NT68 2774 aa8.38□□□□□ -1.07
SRPK1-204ENST00000373825 COL7A1Q02388 2944 aa8.37□□□□□ -1.07
SRPK1-204ENST00000373825 Q6ZRN7 208 aaPredicted RBP8.34□□□□□ -1.08
SRPK1-204ENST00000373825 KRTAP10-1P60331 282 aa8.33□□□□□ -1.08
SRPK1-204ENST00000373825 PLAC4Q8WY50 150 aa8.3□□□□□ -1.08
SRPK1-204ENST00000373825 TPRXLQ17RH7 258 aa8.29□□□□□ -1.08
SRPK1-204ENST00000373825 FBN3Q75N90 2809 aa8.22□□□□□ -1.09
SRPK1-204ENST00000373825 NBPF19A0A087WUL8 3843 aa8.18□□□□□ -1.1
SRPK1-204ENST00000373825 KRTAP10-8P60410 259 aa8.17□□□□□ -1.1
SRPK1-204ENST00000373825 SEC61BP60468 96 aaKnown RBP8.17□□□□□ -1.1
SRPK1-204ENST00000373825 MEGF8Q7Z7M0 2845 aa8.1□□□□□ -1.11
SRPK1-204ENST00000373825 TRRAPQ9Y4A5 3859 aa8.07□□□□□ -1.12
SRPK1-204ENST00000373825 KRTAP12-2P59991 146 aa7.99□□□□□ -1.13
SRPK1-204ENST00000373825 KRTAP1-4P0C5Y4 121 aa7.98□□□□□ -1.13
SRPK1-204ENST00000373825 ZNF469Q96JG9 3925 aaPredicted RBP7.98□□□□□ -1.13
SRPK1-204ENST00000373825 KRTAP15-1Q3LI76 137 aa7.98□□□□□ -1.13
SRPK1-204ENST00000373825 CSMD3Q7Z407 3707 aa7.95□□□□□ -1.14
SRPK1-204ENST00000373825 RPS29P62273 56 aaKnown RBP7.92□□□□□ -1.14
SRPK1-204ENST00000373825 KRTAP3-1Q9BYR8 98 aa7.92□□□□□ -1.14
SRPK1-204ENST00000373825 ANK3Q12955 4377 aaKnown RBP7.91□□□□□ -1.14
SRPK1-204ENST00000373825 AKAP9Q99996 3911 aa7.91□□□□□ -1.14
SRPK1-204ENST00000373825 KRTAP13-4Q3LI77 160 aa7.9□□□□□ -1.14
SRPK1-204ENST00000373825 KRTAP12-1P59990 96 aa7.8□□□□□ -1.16
SRPK1-204ENST00000373825 PP632Q6XCG6 107 aa7.77□□□□□ -1.17
SRPK1-204ENST00000373825 J3QL48 77 aa7.76□□□□□ -1.17
SRPK1-204ENST00000373825 TNP1P09430 55 aa7.75□□□□□ -1.17
SRPK1-204ENST00000373825 KRTAP10-6P60371 365 aaPredicted RBP7.75□□□□□ -1.17
SRPK1-204ENST00000373825 Q5VSD8 79 aa7.67□□□□□ -1.18
SRPK1-204ENST00000373825 M0R2T5 61 aa7.62□□□□□ -1.19
SRPK1-204ENST00000373825 XP32Q5T750 250 aa7.61□□□□□ -1.19
SRPK1-204ENST00000373825 KRTAP3-2Q9BYR7 98 aa7.49□□□□□ -1.21
SRPK1-204ENST00000373825 DNAH10Q8IVF4 4471 aa7.41□□□□□ -1.22
SRPK1-204ENST00000373825 KRTAP3-3Q9BYR6 98 aa7.4□□□□□ -1.22
SRPK1-204ENST00000373825 HUWE1Q7Z6Z7 4374 aaKnown RBP7.37□□□□□ -1.23
SRPK1-204ENST00000373825 A0A1B0GVY2 172 aa7.32□□□□□ -1.24
SRPK1-204ENST00000373825 PRO2289Q9P1D8 64 aa7.21□□□□□ -1.26
SRPK1-204ENST00000373825 ALMS1Q8TCU4 4167 aa7.09□□□□□ -1.27
SRPK1-204ENST00000373825 PLECQ15149 4684 aaKnown RBP7.09□□□□□ -1.27
SRPK1-204ENST00000373825 ANK2Q01484 3957 aa7.08□□□□□ -1.28
SRPK1-204ENST00000373825 DNAH9Q9NYC9 4486 aa7.07□□□□□ -1.28
SRPK1-204ENST00000373825 DNAH8Q96JB1 4490 aa7.06□□□□□ -1.28
SRPK1-204ENST00000373825 DNAH1Q9P2D7 4330 aa7.05□□□□□ -1.28
SRPK1-204ENST00000373825 INE1O15225 51 aa7.04□□□□□ -1.28
SRPK1-204ENST00000373825 LYSTQ99698 3801 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 108.7 ms