RNA–Protein interactions for RNA: ENST00000372237.7

TMEM53-202, Transcript of transmembrane protein 53, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM53, Length 2,310 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-202ENST00000372237 A0A087X002 238 aa11.34□□□□□ -0.59
TMEM53-202ENST00000372237 NOTCH2NLQ7Z3S9 236 aa11.34□□□□□ -0.59
TMEM53-202ENST00000372237 LY6G6CO95867 125 aa11.33□□□□□ -0.6
TMEM53-202ENST00000372237 C1orf134Q5TEV5 83 aa11.33□□□□□ -0.6
TMEM53-202ENST00000372237 LIMD2Q9BT23 127 aa11.33□□□□□ -0.6
TMEM53-202ENST00000372237 C1orf195Q5TG92 126 aa11.32□□□□□ -0.6
TMEM53-202ENST00000372237 DNAH8Q96JB1 4490 aa11.32□□□□□ -0.6
TMEM53-202ENST00000372237 IGLV7-43P04211 117 aa11.32□□□□□ -0.6
TMEM53-202ENST00000372237 SPINK6Q6UWN8 80 aa11.32□□□□□ -0.6
TMEM53-202ENST00000372237 Q5VV11 94 aa11.31□□□□□ -0.6
TMEM53-202ENST00000372237 CIRBP-AS1Q8TBR5 109 aa11.29□□□□□ -0.6
TMEM53-202ENST00000372237 DNAH17Q9UFH2 4485 aa11.28□□□□□ -0.6
TMEM53-202ENST00000372237 PRR15LQ9BU68 103 aa11.26□□□□□ -0.61
TMEM53-202ENST00000372237 CHKB-CPT1BH3BT56 60 aa11.23□□□□□ -0.61
TMEM53-202ENST00000372237 DNAH6Q9C0G6 4158 aa11.21□□□□□ -0.62
TMEM53-202ENST00000372237 SSBP3-AS1Q7Z2R9 100 aa11.2□□□□□ -0.62
TMEM53-202ENST00000372237 LOC101927531A0A1B0GV80 90 aa11.19□□□□□ -0.62
TMEM53-202ENST00000372237 Q5W150 140 aa11.18□□□□□ -0.62
TMEM53-202ENST00000372237 HRES1P13985 223 aa11.16□□□□□ -0.62
TMEM53-202ENST00000372237 A8MU10 97 aa11.15□□□□□ -0.62
TMEM53-202ENST00000372237 SPAG11AQ6PDA7 123 aa11.14□□□□□ -0.63
TMEM53-202ENST00000372237 Q75L30 129 aa11.14□□□□□ -0.63
TMEM53-202ENST00000372237 ALMS1Q8TCU4 4167 aa11.14□□□□□ -0.63
TMEM53-202ENST00000372237 KRTAP10-2P60368 255 aa11.13□□□□□ -0.63
TMEM53-202ENST00000372237 KRTAP13-3Q3SY46 172 aa11.13□□□□□ -0.63
TMEM53-202ENST00000372237 C8orf87E5RJ46 101 aa11.13□□□□□ -0.63
TMEM53-202ENST00000372237 DNAH11Q96DT5 4516 aa11.1□□□□□ -0.63
TMEM53-202ENST00000372237 HYDINQ4G0P3 5121 aa11.1□□□□□ -0.63
TMEM53-202ENST00000372237 LINC01558Q9Y6Z2 57 aa11.1□□□□□ -0.63
TMEM53-202ENST00000372237 A6NED7 52 aa11.09□□□□□ -0.63
TMEM53-202ENST00000372237 DNAH5Q8TE73 4624 aa11.09□□□□□ -0.63
TMEM53-202ENST00000372237 LINC00313P59037 77 aa11.07□□□□□ -0.64
TMEM53-202ENST00000372237 FAT2Q9NYQ8 4349 aa11.05□□□□□ -0.64
TMEM53-202ENST00000372237 PMAIP1Q13794 54 aa11.04□□□□□ -0.64
TMEM53-202ENST00000372237 KRTAP13-2Q52LG2 175 aa11.04□□□□□ -0.64
TMEM53-202ENST00000372237 LCA10Q71F78 164 aa11.02□□□□□ -0.64
TMEM53-202ENST00000372237 FAM229AH3BQW9 127 aa11□□□□□ -0.65
TMEM53-202ENST00000372237 ACYP2P14621 99 aa10.99□□□□□ -0.65
TMEM53-202ENST00000372237 Q6ZSA8 131 aa10.99□□□□□ -0.65
TMEM53-202ENST00000372237 PKD1P98161 4303 aa10.99□□□□□ -0.65
TMEM53-202ENST00000372237 KRTAP10-1P60331 282 aa10.98□□□□□ -0.65
TMEM53-202ENST00000372237 PRR26Q8N8Z3 221 aa10.98□□□□□ -0.65
TMEM53-202ENST00000372237 SPTSSBQ8NFR3 76 aa10.98□□□□□ -0.65
TMEM53-202ENST00000372237 RETNLBQ9BQ08 111 aa10.98□□□□□ -0.65
TMEM53-202ENST00000372237 CDC42SE1Q9NRR8 79 aa10.96□□□□□ -0.66
TMEM53-202ENST00000372237 SACSQ9NZJ4 4579 aa10.95□□□□□ -0.66
TMEM53-202ENST00000372237 ATP11AUNQ6ZP68 121 aa10.95□□□□□ -0.66
TMEM53-202ENST00000372237 DMAC1Q96GE9 116 aa10.92□□□□□ -0.66
TMEM53-202ENST00000372237 KRTAP1-4P0C5Y4 121 aa10.91□□□□□ -0.66
TMEM53-202ENST00000372237 IGKV2-30P06310 120 aa10.9□□□□□ -0.66
TMEM53-202ENST00000372237 LRP1BQ9NZR2 4599 aa10.9□□□□□ -0.67
TMEM53-202ENST00000372237 KRTAP16-1A8MUX0 517 aa10.89□□□□□ -0.67
TMEM53-202ENST00000372237 SPINK7P58062 85 aa10.89□□□□□ -0.67
TMEM53-202ENST00000372237 C4orf48Q5BLP8 95 aa10.84□□□□□ -0.67
TMEM53-202ENST00000372237 PLA2G1BP04054 148 aaKnown RBP10.83□□□□□ -0.68
TMEM53-202ENST00000372237 TYMSOSQ8TAI1 123 aa10.81□□□□□ -0.68
TMEM53-202ENST00000372237 PKHD1P08F94 4074 aa10.81□□□□□ -0.68
TMEM53-202ENST00000372237 VPS13BQ7Z7G8 4022 aa10.79□□□□□ -0.68
TMEM53-202ENST00000372237 IGKV2D-30A0A075B6S6 120 aa10.79□□□□□ -0.68
TMEM53-202ENST00000372237 A6NN06 94 aa10.77□□□□□ -0.69
TMEM53-202ENST00000372237 KTN1-AS1Q86SY8 53 aa10.77□□□□□ -0.69
TMEM53-202ENST00000372237 SPINK1P00995 79 aa10.76□□□□□ -0.69
TMEM53-202ENST00000372237 SEC61GP60059 68 aa10.75□□□□□ -0.69
TMEM53-202ENST00000372237 A0A1B0GU69 56 aa10.72□□□□□ -0.69
TMEM53-202ENST00000372237 C7orf65Q6ZTY9 151 aa10.68□□□□□ -0.7
TMEM53-202ENST00000372237 KMT2CQ8NEZ4 4911 aaKnown RBP10.66□□□□□ -0.7
TMEM53-202ENST00000372237 DYNC1H1Q14204 4646 aaKnown RBP10.65□□□□□ -0.7
TMEM53-202ENST00000372237 A0A1B0GVY2 172 aa10.64□□□□□ -0.71
TMEM53-202ENST00000372237 LINC00304Q8N9R0 145 aa10.64□□□□□ -0.71
TMEM53-202ENST00000372237 RYR2Q92736 4967 aa10.64□□□□□ -0.71
TMEM53-202ENST00000372237 RPS29P62273 56 aaKnown RBP10.6□□□□□ -0.71
TMEM53-202ENST00000372237 UQCR11O14957 56 aa10.53□□□□□ -0.72
TMEM53-202ENST00000372237 SMR3BP02814 79 aaPredicted RBP10.53□□□□□ -0.72
TMEM53-202ENST00000372237 SPATA8Q6RVD6 105 aa10.53□□□□□ -0.72
TMEM53-202ENST00000372237 APOBP04114 4563 aaKnown RBP10.53□□□□□ -0.72
TMEM53-202ENST00000372237 Q8N1X5 172 aa10.52□□□□□ -0.72
TMEM53-202ENST00000372237 FAT1Q14517 4588 aa10.51□□□□□ -0.73
TMEM53-202ENST00000372237 MIR22HGQ0VDD5 57 aa10.5□□□□□ -0.73
TMEM53-202ENST00000372237 RBM12B-AS1Q9P1G2 102 aa10.5□□□□□ -0.73
TMEM53-202ENST00000372237 C9orf92A6NGG3 77 aa10.46□□□□□ -0.74
TMEM53-202ENST00000372237 KRTAP10-4P60372 401 aaPredicted RBP10.4□□□□□ -0.74
TMEM53-202ENST00000372237 C20orf166-AS1Q96NR2 134 aa10.4□□□□□ -0.74
TMEM53-202ENST00000372237 A8MUU9 505 aa10.4□□□□□ -0.74
TMEM53-202ENST00000372237 RYR3Q15413 4870 aa10.35□□□□□ -0.75
TMEM53-202ENST00000372237 PRAC1Q96KF2 57 aa10.29□□□□□ -0.76
TMEM53-202ENST00000372237 PKHD1L1Q86WI1 4243 aa10.29□□□□□ -0.76
TMEM53-202ENST00000372237 ADM2Q7Z4H4 148 aa10.27□□□□□ -0.77
TMEM53-202ENST00000372237 KRTAP3-1Q9BYR8 98 aa10.26□□□□□ -0.77
TMEM53-202ENST00000372237 HSPG2P98160 4391 aa10.21□□□□□ -0.77
TMEM53-202ENST00000372237 H0YAA0 97 aa10.15□□□□□ -0.79
TMEM53-202ENST00000372237 FLG2Q5D862 2391 aaPredicted RBP10.12□□□□□ -0.79
TMEM53-202ENST00000372237 A0A1B0GU33 70 aa10.11□□□□□ -0.79
TMEM53-202ENST00000372237 Q5VSD8 79 aa10.11□□□□□ -0.79
TMEM53-202ENST00000372237 COX6B2Q6YFQ2 88 aa10.11□□□□□ -0.79
TMEM53-202ENST00000372237 RYR1P21817 5038 aa10.1□□□□□ -0.79
TMEM53-202ENST00000372237 LRP1Q07954 4544 aaKnown RBP10.09□□□□□ -0.79
TMEM53-202ENST00000372237 H1FX-AS1Q4G0G2 97 aa10.06□□□□□ -0.8
TMEM53-202ENST00000372237 KRTAP17-1Q9BYP8 105 aa10.05□□□□□ -0.8
TMEM53-202ENST00000372237 TNXBP22105 4242 aa10.03□□□□□ -0.8
TMEM53-202ENST00000372237 KIAA1109Q2LD37 5005 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 106.9 ms