RNA–Protein interactions for RNA: ENST00000372207.3

BEST4-201, Transcript of bestrophin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BEST4, Length 2,047 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST4-201ENST00000372207 TMEM254Q8TBM7 123 aa11.41□□□□□ -0.58
BEST4-201ENST00000372207 C1orf195Q5TG92 126 aa11.39□□□□□ -0.59
BEST4-201ENST00000372207 LIMD2Q9BT23 127 aa11.39□□□□□ -0.59
BEST4-201ENST00000372207 FAM229AH3BQW9 127 aa11.38□□□□□ -0.59
BEST4-201ENST00000372207 SPINK1P00995 79 aa11.38□□□□□ -0.59
BEST4-201ENST00000372207 NOTCH2NLQ7Z3S9 236 aa11.38□□□□□ -0.59
BEST4-201ENST00000372207 RYR1P21817 5038 aa11.36□□□□□ -0.59
BEST4-201ENST00000372207 LINC00304Q8N9R0 145 aa11.35□□□□□ -0.59
BEST4-201ENST00000372207 A0A0U1RQV1 116 aa11.33□□□□□ -0.6
BEST4-201ENST00000372207 C5orf47Q569G3 176 aa11.33□□□□□ -0.6
BEST4-201ENST00000372207 H7BZZ5 65 aa11.32□□□□□ -0.6
BEST4-201ENST00000372207 Q5VSD8 79 aa11.31□□□□□ -0.6
BEST4-201ENST00000372207 SPAG11AQ6PDA7 123 aa11.31□□□□□ -0.6
BEST4-201ENST00000372207 KIAA1109Q2LD37 5005 aa11.3□□□□□ -0.6
BEST4-201ENST00000372207 PKHD1L1Q86WI1 4243 aa11.3□□□□□ -0.6
BEST4-201ENST00000372207 EPPK1P58107 5090 aaKnown RBP11.29□□□□□ -0.6
BEST4-201ENST00000372207 RPS29P62273 56 aaKnown RBP11.28□□□□□ -0.6
BEST4-201ENST00000372207 MRPL34Q9BQ48 92 aaKnown RBP11.28□□□□□ -0.6
BEST4-201ENST00000372207 RPS28P62857 69 aaKnown RBP11.27□□□□□ -0.61
BEST4-201ENST00000372207 FAM236DA0A1B0GTK5 79 aa11.26□□□□□ -0.61
BEST4-201ENST00000372207 NDUFC1O43677 76 aa11.26□□□□□ -0.61
BEST4-201ENST00000372207 FAM236CP0DP71 79 aa11.26□□□□□ -0.61
BEST4-201ENST00000372207 C8orf87E5RJ46 101 aa11.25□□□□□ -0.61
BEST4-201ENST00000372207 NDUFS5O43920 106 aa11.24□□□□□ -0.61
BEST4-201ENST00000372207 MP68P56378 58 aa11.24□□□□□ -0.61
BEST4-201ENST00000372207 TP53AIP1Q9HCN2 124 aa11.23□□□□□ -0.61
BEST4-201ENST00000372207 LRP1Q07954 4544 aaKnown RBP11.23□□□□□ -0.61
BEST4-201ENST00000372207 LINC00313P59037 77 aa11.23□□□□□ -0.61
BEST4-201ENST00000372207 ZCCHC13Q8WW36 166 aaKnown RBP11.22□□□□□ -0.61
BEST4-201ENST00000372207 KRTAP17-1Q9BYP8 105 aa11.22□□□□□ -0.61
BEST4-201ENST00000372207 H0Y9P7 68 aa11.21□□□□□ -0.62
BEST4-201ENST00000372207 TRAV22A0A0B4J277 110 aa11.18□□□□□ -0.62
BEST4-201ENST00000372207 LINC00208Q96KT6 92 aa11.18□□□□□ -0.62
BEST4-201ENST00000372207 OXTP01178 125 aa11.16□□□□□ -0.62
BEST4-201ENST00000372207 H3BPC8 53 aa11.14□□□□□ -0.63
BEST4-201ENST00000372207 TNXBP22105 4242 aa11.13□□□□□ -0.63
BEST4-201ENST00000372207 ATP5EP56381 51 aaPredicted RBP11.13□□□□□ -0.63
BEST4-201ENST00000372207 C1orf64Q8NEQ6 169 aa11.13□□□□□ -0.63
BEST4-201ENST00000372207 Q8N1X5 172 aa11.11□□□□□ -0.63
BEST4-201ENST00000372207 KRTAP16-1A8MUX0 517 aa11.1□□□□□ -0.63
BEST4-201ENST00000372207 KRTAP10-8P60410 259 aa11.1□□□□□ -0.63
BEST4-201ENST00000372207 Q8N9P0 234 aaPredicted RBP11.1□□□□□ -0.63
BEST4-201ENST00000372207 SERP1Q9Y6X1 66 aa11.1□□□□□ -0.63
BEST4-201ENST00000372207 FLG2Q5D862 2391 aaPredicted RBP11.09□□□□□ -0.63
BEST4-201ENST00000372207 Q5W150 140 aa11.07□□□□□ -0.64
BEST4-201ENST00000372207 FAT3Q8TDW7 4589 aa11.06□□□□□ -0.64
BEST4-201ENST00000372207 MYCBP2O75592 4640 aa11.05□□□□□ -0.64
BEST4-201ENST00000372207 RETNLBQ9BQ08 111 aa11.04□□□□□ -0.64
BEST4-201ENST00000372207 KRTAP13-3Q3SY46 172 aa11.02□□□□□ -0.65
BEST4-201ENST00000372207 DMBT1Q9UGM3 2413 aaPredicted RBP10.97□□□□□ -0.65
BEST4-201ENST00000372207 C9orf92A6NGG3 77 aa10.93□□□□□ -0.66
BEST4-201ENST00000372207 PCOTHQ58A44 107 aa10.93□□□□□ -0.66
BEST4-201ENST00000372207 LOC101927531A0A1B0GV80 90 aa10.92□□□□□ -0.66
BEST4-201ENST00000372207 PRR4Q16378 134 aa10.92□□□□□ -0.66
BEST4-201ENST00000372207 MT1HL1P0DM35 61 aa10.91□□□□□ -0.66
BEST4-201ENST00000372207 SPANXA2-OT1Q8N9U9 137 aa10.9□□□□□ -0.66
BEST4-201ENST00000372207 CYP4F30PQ9H0H9 118 aa10.88□□□□□ -0.67
BEST4-201ENST00000372207 SMIM26A0A096LP01 95 aa10.87□□□□□ -0.67
BEST4-201ENST00000372207 SVIPQ8NHG7 77 aa10.85□□□□□ -0.67
BEST4-201ENST00000372207 KRTAP4-5Q9BYR2 181 aa10.85□□□□□ -0.67
BEST4-201ENST00000372207 IGLV7-46A0A075B6I9 117 aa10.84□□□□□ -0.67
BEST4-201ENST00000372207 FP248Q71RG6 208 aaPredicted RBP10.82□□□□□ -0.68
BEST4-201ENST00000372207 C20orf166-AS1Q96NR2 134 aa10.82□□□□□ -0.68
BEST4-201ENST00000372207 IGKV2-30P06310 120 aa10.81□□□□□ -0.68
BEST4-201ENST00000372207 C4orf26Q17RF5 130 aa10.81□□□□□ -0.68
BEST4-201ENST00000372207 A8MUU9 505 aa10.8□□□□□ -0.68
BEST4-201ENST00000372207 IGKV2D-30A0A075B6S6 120 aa10.75□□□□□ -0.69
BEST4-201ENST00000372207 HRES1P13985 223 aa10.71□□□□□ -0.69
BEST4-201ENST00000372207 ABCA13Q86UQ4 5058 aa10.71□□□□□ -0.7
BEST4-201ENST00000372207 BIRC6Q9NR09 4857 aa10.71□□□□□ -0.7
BEST4-201ENST00000372207 Q75L30 129 aa10.69□□□□□ -0.7
BEST4-201ENST00000372207 HERC2O95714 4834 aa10.65□□□□□ -0.7
BEST4-201ENST00000372207 C7orf65Q6ZTY9 151 aa10.64□□□□□ -0.71
BEST4-201ENST00000372207 MPLKIPQ8TAP9 179 aa10.62□□□□□ -0.71
BEST4-201ENST00000372207 COA5Q86WW8 74 aa10.61□□□□□ -0.71
BEST4-201ENST00000372207 XP32Q5T750 250 aa10.58□□□□□ -0.72
BEST4-201ENST00000372207 DMAC1Q96GE9 116 aa10.57□□□□□ -0.72
BEST4-201ENST00000372207 ATP11AUNQ6ZP68 121 aa10.55□□□□□ -0.72
BEST4-201ENST00000372207 RPL37P61927 97 aaKnown RBP10.55□□□□□ -0.72
BEST4-201ENST00000372207 Q1T7F1 81 aa10.54□□□□□ -0.72
BEST4-201ENST00000372207 ACYP2P14621 99 aa10.53□□□□□ -0.72
BEST4-201ENST00000372207 SPINK7P58062 85 aa10.53□□□□□ -0.72
BEST4-201ENST00000372207 J3QL48 77 aa10.48□□□□□ -0.73
BEST4-201ENST00000372207 TPRXLQ17RH7 258 aa10.48□□□□□ -0.73
BEST4-201ENST00000372207 LRP2P98164 4655 aa10.43□□□□□ -0.74
BEST4-201ENST00000372207 V9GYY9 64 aa10.43□□□□□ -0.74
BEST4-201ENST00000372207 LPAP08519 4548 aa10.43□□□□□ -0.74
BEST4-201ENST00000372207 CHKB-CPT1BH3BT56 60 aa10.38□□□□□ -0.75
BEST4-201ENST00000372207 A8MUN3 132 aa10.36□□□□□ -0.75
BEST4-201ENST00000372207 PSPHP1O15172 72 aa10.35□□□□□ -0.75
BEST4-201ENST00000372207 PRO0628Q9UI54 55 aa10.35□□□□□ -0.75
BEST4-201ENST00000372207 KRTAP3-1Q9BYR8 98 aa10.33□□□□□ -0.76
BEST4-201ENST00000372207 BRK1Q8WUW1 75 aa10.33□□□□□ -0.76
BEST4-201ENST00000372207 PCLOQ9Y6V0 5065 aa10.28□□□□□ -0.76
BEST4-201ENST00000372207 Q5VV11 94 aa10.27□□□□□ -0.77
BEST4-201ENST00000372207 COX6B2Q6YFQ2 88 aa10.27□□□□□ -0.77
BEST4-201ENST00000372207 PRR15LQ9BU68 103 aa10.24□□□□□ -0.77
BEST4-201ENST00000372207 LINC01558Q9Y6Z2 57 aa10.23□□□□□ -0.77
BEST4-201ENST00000372207 HERC1Q15751 4861 aa10.16□□□□□ -0.78
BEST4-201ENST00000372207 SEC61BP60468 96 aaKnown RBP10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms