RNA–Protein interactions for RNA: ENST00000372067.7

VEGFA-205, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 3,535 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-205ENST00000372067 COA5Q86WW8 74 aa10.33□□□□□ -0.76
VEGFA-205ENST00000372067 SPANXA2-OT1Q8N9U9 137 aa10.33□□□□□ -0.76
VEGFA-205ENST00000372067 PLAC8Q9NZF1 115 aa10.32□□□□□ -0.76
VEGFA-205ENST00000372067 A8MWP4 228 aa10.32□□□□□ -0.76
VEGFA-205ENST00000372067 KRTAP10-2P60368 255 aa10.32□□□□□ -0.76
VEGFA-205ENST00000372067 KRTAP13-1Q8IUC0 172 aa10.3□□□□□ -0.76
VEGFA-205ENST00000372067 SPAG11AQ6PDA7 123 aa10.29□□□□□ -0.76
VEGFA-205ENST00000372067 IGLV7-43P04211 117 aa10.29□□□□□ -0.76
VEGFA-205ENST00000372067 FBN3Q75N90 2809 aa10.27□□□□□ -0.77
VEGFA-205ENST00000372067 H0Y9P7 68 aa10.27□□□□□ -0.77
VEGFA-205ENST00000372067 LINC00472Q9H8W2 130 aa10.26□□□□□ -0.77
VEGFA-205ENST00000372067 LINC01558Q9Y6Z2 57 aa10.24□□□□□ -0.77
VEGFA-205ENST00000372067 PRKDCP78527 4128 aaKnown RBP10.22□□□□□ -0.77
VEGFA-205ENST00000372067 STARD9Q9P2P6 4700 aa10.21□□□□□ -0.77
VEGFA-205ENST00000372067 DNAH7Q8WXX0 4024 aa10.21□□□□□ -0.77
VEGFA-205ENST00000372067 DNAH1Q9P2D7 4330 aa10.19□□□□□ -0.78
VEGFA-205ENST00000372067 KRTAP29-1A8MX34 341 aaPredicted RBP10.18□□□□□ -0.78
VEGFA-205ENST00000372067 KRTAP10-1P60331 282 aa10.18□□□□□ -0.78
VEGFA-205ENST00000372067 PCOTHQ58A44 107 aa10.17□□□□□ -0.78
VEGFA-205ENST00000372067 DNHD1Q96M86 4753 aa10.17□□□□□ -0.78
VEGFA-205ENST00000372067 PLA2G1BP04054 148 aaKnown RBP10.16□□□□□ -0.78
VEGFA-205ENST00000372067 LINC00483Q53H64 154 aa10.16□□□□□ -0.78
VEGFA-205ENST00000372067 C8orf17Q9NRJ1 99 aa10.15□□□□□ -0.78
VEGFA-205ENST00000372067 IGLV7-46A0A075B6I9 117 aa10.14□□□□□ -0.79
VEGFA-205ENST00000372067 MMP24-AS1A0A0U1RRL7 71 aa10.14□□□□□ -0.79
VEGFA-205ENST00000372067 A0A1B0GVX0 72 aa10.12□□□□□ -0.79
VEGFA-205ENST00000372067 RETNLBQ9BQ08 111 aa10.1□□□□□ -0.79
VEGFA-205ENST00000372067 SMR3BP02814 79 aaPredicted RBP10.07□□□□□ -0.8
VEGFA-205ENST00000372067 H3BPC8 53 aa10.06□□□□□ -0.8
VEGFA-205ENST00000372067 SSBP3-AS1Q7Z2R9 100 aa10.06□□□□□ -0.8
VEGFA-205ENST00000372067 Q96NJ1 140 aa10.06□□□□□ -0.8
VEGFA-205ENST00000372067 MRPL34Q9BQ48 92 aaKnown RBP10.05□□□□□ -0.8
VEGFA-205ENST00000372067 A0A087X002 238 aa10.04□□□□□ -0.8
VEGFA-205ENST00000372067 NOTCH2NLQ7Z3S9 236 aa10.04□□□□□ -0.8
VEGFA-205ENST00000372067 KMT2AQ03164 3969 aa10.04□□□□□ -0.8
VEGFA-205ENST00000372067 VPS13DQ5THJ4 4388 aa10.03□□□□□ -0.8
VEGFA-205ENST00000372067 HRES1P13985 223 aa10.03□□□□□ -0.8
VEGFA-205ENST00000372067 TP53AIP1Q9HCN2 124 aa10.02□□□□□ -0.81
VEGFA-205ENST00000372067 CSAG1Q6PB30 78 aa9.99□□□□□ -0.81
VEGFA-205ENST00000372067 TYMSOSQ8TAI1 123 aa9.98□□□□□ -0.81
VEGFA-205ENST00000372067 DYNC2H1Q8NCM8 4307 aaKnown RBP9.98□□□□□ -0.81
VEGFA-205ENST00000372067 ALMS1Q8TCU4 4167 aa9.93□□□□□ -0.82
VEGFA-205ENST00000372067 KRTAP13-2Q52LG2 175 aa9.92□□□□□ -0.82
VEGFA-205ENST00000372067 Q6ZSA8 131 aa9.89□□□□□ -0.83
VEGFA-205ENST00000372067 ASB16-AS1Q495Z4 193 aa9.87□□□□□ -0.83
VEGFA-205ENST00000372067 KRTAP21-3Q3LHN1 58 aa9.84□□□□□ -0.83
VEGFA-205ENST00000372067 DNAH2Q9P225 4427 aa9.84□□□□□ -0.83
VEGFA-205ENST00000372067 DNAH17Q9UFH2 4485 aa9.83□□□□□ -0.84
VEGFA-205ENST00000372067 IGKV2D-30A0A075B6S6 120 aa9.81□□□□□ -0.84
VEGFA-205ENST00000372067 IGKV2-30P06310 120 aa9.81□□□□□ -0.84
VEGFA-205ENST00000372067 Q5W150 140 aa9.81□□□□□ -0.84
VEGFA-205ENST00000372067 DNAH11Q96DT5 4516 aa9.81□□□□□ -0.84
VEGFA-205ENST00000372067 HECTD4Q9Y4D8 3996 aa9.8□□□□□ -0.84
VEGFA-205ENST00000372067 LINC00304Q8N9R0 145 aa9.79□□□□□ -0.84
VEGFA-205ENST00000372067 SPATA8Q6RVD6 105 aa9.79□□□□□ -0.84
VEGFA-205ENST00000372067 KRTAP1-4P0C5Y4 121 aa9.77□□□□□ -0.85
VEGFA-205ENST00000372067 FRAS1Q86XX4 4008 aa9.76□□□□□ -0.85
VEGFA-205ENST00000372067 FAM229AH3BQW9 127 aa9.75□□□□□ -0.85
VEGFA-205ENST00000372067 DNAH8Q96JB1 4490 aa9.74□□□□□ -0.85
VEGFA-205ENST00000372067 SPINK1P00995 79 aa9.73□□□□□ -0.85
VEGFA-205ENST00000372067 ROMO1P60602 79 aa9.71□□□□□ -0.85
VEGFA-205ENST00000372067 DNAH6Q9C0G6 4158 aa9.71□□□□□ -0.86
VEGFA-205ENST00000372067 C9orf92A6NGG3 77 aa9.7□□□□□ -0.86
VEGFA-205ENST00000372067 HYDINQ4G0P3 5121 aa9.67□□□□□ -0.86
VEGFA-205ENST00000372067 MIR22HGQ0VDD5 57 aa9.66□□□□□ -0.86
VEGFA-205ENST00000372067 A0A1B0GU69 56 aa9.63□□□□□ -0.87
VEGFA-205ENST00000372067 DNAH5Q8TE73 4624 aa9.62□□□□□ -0.87
VEGFA-205ENST00000372067 P0C880 135 aa9.62□□□□□ -0.87
VEGFA-205ENST00000372067 ACYP2P14621 99 aa9.62□□□□□ -0.87
VEGFA-205ENST00000372067 LRP1BQ9NZR2 4599 aa9.61□□□□□ -0.87
VEGFA-205ENST00000372067 DMBT1Q9UGM3 2413 aaPredicted RBP9.58□□□□□ -0.88
VEGFA-205ENST00000372067 FLG2Q5D862 2391 aaPredicted RBP9.57□□□□□ -0.88
VEGFA-205ENST00000372067 UQCR11O14957 56 aa9.55□□□□□ -0.88
VEGFA-205ENST00000372067 KRTAP25-1Q3LHN0 102 aa9.51□□□□□ -0.89
VEGFA-205ENST00000372067 Q8N1X5 172 aa9.51□□□□□ -0.89
VEGFA-205ENST00000372067 A0A1B0GVY2 172 aa9.5□□□□□ -0.89
VEGFA-205ENST00000372067 KRTAP16-1A8MUX0 517 aa9.49□□□□□ -0.89
VEGFA-205ENST00000372067 KRTAP13-3Q3SY46 172 aa9.48□□□□□ -0.89
VEGFA-205ENST00000372067 DMAC1Q96GE9 116 aa9.48□□□□□ -0.89
VEGFA-205ENST00000372067 VPS13BQ7Z7G8 4022 aa9.42□□□□□ -0.9
VEGFA-205ENST00000372067 A8MUU9 505 aa9.42□□□□□ -0.9
VEGFA-205ENST00000372067 Q5VSD8 79 aa9.41□□□□□ -0.9
VEGFA-205ENST00000372067 FAT2Q9NYQ8 4349 aa9.4□□□□□ -0.91
VEGFA-205ENST00000372067 DYNC1H1Q14204 4646 aaKnown RBP9.38□□□□□ -0.91
VEGFA-205ENST00000372067 A0A0A0MQY5 61 aa9.38□□□□□ -0.91
VEGFA-205ENST00000372067 PKHD1P08F94 4074 aa9.37□□□□□ -0.91
VEGFA-205ENST00000372067 PKD1P98161 4303 aa9.37□□□□□ -0.91
VEGFA-205ENST00000372067 FAT1Q14517 4588 aa9.36□□□□□ -0.91
VEGFA-205ENST00000372067 RPS29P62273 56 aaKnown RBP9.35□□□□□ -0.91
VEGFA-205ENST00000372067 CRIPTQ9P021 101 aa9.35□□□□□ -0.91
VEGFA-205ENST00000372067 SACSQ9NZJ4 4579 aa9.34□□□□□ -0.91
VEGFA-205ENST00000372067 KRTAP10-4P60372 401 aaPredicted RBP9.27□□□□□ -0.93
VEGFA-205ENST00000372067 H0YAA0 97 aa9.24□□□□□ -0.93
VEGFA-205ENST00000372067 C20orf166-AS1Q96NR2 134 aa9.19□□□□□ -0.94
VEGFA-205ENST00000372067 NDUFAF8A1L188 74 aa9.15□□□□□ -0.94
VEGFA-205ENST00000372067 KMT2CQ8NEZ4 4911 aaKnown RBP9.14□□□□□ -0.95
VEGFA-205ENST00000372067 RYR2Q92736 4967 aa9.14□□□□□ -0.95
VEGFA-205ENST00000372067 APOBP04114 4563 aaKnown RBP9.08□□□□□ -0.96
VEGFA-205ENST00000372067 KRTAP10-8P60410 259 aa9.08□□□□□ -0.96
VEGFA-205ENST00000372067 COX6B2Q6YFQ2 88 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms