RNA–Protein interactions for RNA: ENST00000371747.7

TTC39A-203, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 2 BASIC

Gene TTC39A, Length 1,876 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-203ENST00000371747 TMEM254Q8TBM7 123 aa13.11□□□□□ -0.31
TTC39A-203ENST00000371747 C4orf48Q5BLP8 95 aa13.09□□□□□ -0.31
TTC39A-203ENST00000371747 LIMD2Q9BT23 127 aa13.08□□□□□ -0.32
TTC39A-203ENST00000371747 C1orf195Q5TG92 126 aa13.07□□□□□ -0.32
TTC39A-203ENST00000371747 KIAA1109Q2LD37 5005 aa13.05□□□□□ -0.32
TTC39A-203ENST00000371747 KRTAP17-1Q9BYP8 105 aa13.05□□□□□ -0.32
TTC39A-203ENST00000371747 A0A0U1RQV1 116 aa13.04□□□□□ -0.32
TTC39A-203ENST00000371747 SPINK1P00995 79 aa13.04□□□□□ -0.32
TTC39A-203ENST00000371747 NOTCH2NLQ7Z3S9 236 aa13.04□□□□□ -0.32
TTC39A-203ENST00000371747 FAM229AH3BQW9 127 aa13.03□□□□□ -0.32
TTC39A-203ENST00000371747 C5orf47Q569G3 176 aa13.02□□□□□ -0.32
TTC39A-203ENST00000371747 PKHD1L1Q86WI1 4243 aa13.02□□□□□ -0.33
TTC39A-203ENST00000371747 LINC00304Q8N9R0 145 aa13.02□□□□□ -0.33
TTC39A-203ENST00000371747 H7BZZ5 65 aa13.01□□□□□ -0.33
TTC39A-203ENST00000371747 TMEM258P61165 79 aa13□□□□□ -0.33
TTC39A-203ENST00000371747 Q5VSD8 79 aa12.99□□□□□ -0.33
TTC39A-203ENST00000371747 SPAG11AQ6PDA7 123 aa12.97□□□□□ -0.33
TTC39A-203ENST00000371747 MRPL34Q9BQ48 92 aaKnown RBP12.96□□□□□ -0.33
TTC39A-203ENST00000371747 NDUFC1O43677 76 aa12.95□□□□□ -0.34
TTC39A-203ENST00000371747 RPS29P62273 56 aaKnown RBP12.95□□□□□ -0.34
TTC39A-203ENST00000371747 C8orf87E5RJ46 101 aa12.94□□□□□ -0.34
TTC39A-203ENST00000371747 ZCCHC13Q8WW36 166 aaKnown RBP12.91□□□□□ -0.34
TTC39A-203ENST00000371747 MP68P56378 58 aa12.91□□□□□ -0.34
TTC39A-203ENST00000371747 TP53AIP1Q9HCN2 124 aa12.91□□□□□ -0.34
TTC39A-203ENST00000371747 H0Y9P7 68 aa12.89□□□□□ -0.35
TTC39A-203ENST00000371747 NDUFS5O43920 106 aa12.89□□□□□ -0.35
TTC39A-203ENST00000371747 LINC00313P59037 77 aa12.89□□□□□ -0.35
TTC39A-203ENST00000371747 Q8N1X5 172 aa12.86□□□□□ -0.35
TTC39A-203ENST00000371747 TRAV22A0A0B4J277 110 aa12.85□□□□□ -0.35
TTC39A-203ENST00000371747 LINC00208Q96KT6 92 aa12.85□□□□□ -0.35
TTC39A-203ENST00000371747 FAM236DA0A1B0GTK5 79 aa12.83□□□□□ -0.36
TTC39A-203ENST00000371747 FAM236CP0DP71 79 aa12.83□□□□□ -0.36
TTC39A-203ENST00000371747 H3BPC8 53 aa12.82□□□□□ -0.36
TTC39A-203ENST00000371747 LRP1Q07954 4544 aaKnown RBP12.78□□□□□ -0.36
TTC39A-203ENST00000371747 C1orf64Q8NEQ6 169 aa12.77□□□□□ -0.37
TTC39A-203ENST00000371747 KRTAP16-1A8MUX0 517 aa12.76□□□□□ -0.37
TTC39A-203ENST00000371747 Q8N9P0 234 aaPredicted RBP12.74□□□□□ -0.37
TTC39A-203ENST00000371747 TNXBP22105 4242 aa12.72□□□□□ -0.37
TTC39A-203ENST00000371747 KRTAP10-8P60410 259 aa12.72□□□□□ -0.37
TTC39A-203ENST00000371747 ATP5EP56381 51 aaPredicted RBP12.71□□□□□ -0.37
TTC39A-203ENST00000371747 FAT3Q8TDW7 4589 aa12.7□□□□□ -0.38
TTC39A-203ENST00000371747 Q5W150 140 aa12.7□□□□□ -0.38
TTC39A-203ENST00000371747 BIRC6Q9NR09 4857 aa12.68□□□□□ -0.38
TTC39A-203ENST00000371747 RPS28P62857 69 aaKnown RBP12.68□□□□□ -0.38
TTC39A-203ENST00000371747 KRTAP4-5Q9BYR2 181 aa12.68□□□□□ -0.38
TTC39A-203ENST00000371747 KRTAP13-3Q3SY46 172 aa12.67□□□□□ -0.38
TTC39A-203ENST00000371747 FLG2Q5D862 2391 aaPredicted RBP12.66□□□□□ -0.38
TTC39A-203ENST00000371747 RETNLBQ9BQ08 111 aa12.63□□□□□ -0.39
TTC39A-203ENST00000371747 SERP1Q9Y6X1 66 aa12.61□□□□□ -0.39
TTC39A-203ENST00000371747 OXTP01178 125 aa12.59□□□□□ -0.39
TTC39A-203ENST00000371747 MYCBP2O75592 4640 aa12.58□□□□□ -0.4
TTC39A-203ENST00000371747 LOC101927531A0A1B0GV80 90 aa12.57□□□□□ -0.4
TTC39A-203ENST00000371747 PCOTHQ58A44 107 aa12.55□□□□□ -0.4
TTC39A-203ENST00000371747 SPANXA2-OT1Q8N9U9 137 aa12.55□□□□□ -0.4
TTC39A-203ENST00000371747 PRR4Q16378 134 aa12.54□□□□□ -0.4
TTC39A-203ENST00000371747 C9orf92A6NGG3 77 aa12.53□□□□□ -0.4
TTC39A-203ENST00000371747 MT1HL1P0DM35 61 aa12.53□□□□□ -0.4
TTC39A-203ENST00000371747 CYP4F30PQ9H0H9 118 aa12.53□□□□□ -0.4
TTC39A-203ENST00000371747 HERC2O95714 4834 aa12.52□□□□□ -0.41
TTC39A-203ENST00000371747 IGLV7-46A0A075B6I9 117 aa12.46□□□□□ -0.42
TTC39A-203ENST00000371747 ABCA13Q86UQ4 5058 aa12.44□□□□□ -0.42
TTC39A-203ENST00000371747 DMBT1Q9UGM3 2413 aaPredicted RBP12.43□□□□□ -0.42
TTC39A-203ENST00000371747 IGKV2-30P06310 120 aa12.43□□□□□ -0.42
TTC39A-203ENST00000371747 C20orf166-AS1Q96NR2 134 aa12.42□□□□□ -0.42
TTC39A-203ENST00000371747 A8MUU9 505 aa12.41□□□□□ -0.42
TTC39A-203ENST00000371747 FP248Q71RG6 208 aaPredicted RBP12.39□□□□□ -0.43
TTC39A-203ENST00000371747 IGKV2D-30A0A075B6S6 120 aa12.33□□□□□ -0.44
TTC39A-203ENST00000371747 SMIM26A0A096LP01 95 aa12.31□□□□□ -0.44
TTC39A-203ENST00000371747 HRES1P13985 223 aa12.31□□□□□ -0.44
TTC39A-203ENST00000371747 Q75L30 129 aa12.27□□□□□ -0.44
TTC39A-203ENST00000371747 C7orf65Q6ZTY9 151 aa12.23□□□□□ -0.45
TTC39A-203ENST00000371747 COA5Q86WW8 74 aa12.21□□□□□ -0.46
TTC39A-203ENST00000371747 DMAC1Q96GE9 116 aa12.14□□□□□ -0.47
TTC39A-203ENST00000371747 XP32Q5T750 250 aa12.14□□□□□ -0.47
TTC39A-203ENST00000371747 J3QL48 77 aa12.12□□□□□ -0.47
TTC39A-203ENST00000371747 ACYP2P14621 99 aa12.1□□□□□ -0.47
TTC39A-203ENST00000371747 RPL37P61927 97 aaKnown RBP12.1□□□□□ -0.47
TTC39A-203ENST00000371747 MPLKIPQ8TAP9 179 aa12.1□□□□□ -0.47
TTC39A-203ENST00000371747 C4orf26Q17RF5 130 aa12.08□□□□□ -0.48
TTC39A-203ENST00000371747 ATP11AUNQ6ZP68 121 aa12.08□□□□□ -0.48
TTC39A-203ENST00000371747 SPINK7P58062 85 aa12.07□□□□□ -0.48
TTC39A-203ENST00000371747 PCLOQ9Y6V0 5065 aa12.04□□□□□ -0.48
TTC39A-203ENST00000371747 Q1T7F1 81 aa12.02□□□□□ -0.49
TTC39A-203ENST00000371747 TPRXLQ17RH7 258 aa12□□□□□ -0.49
TTC39A-203ENST00000371747 CHKB-CPT1BH3BT56 60 aa11.93□□□□□ -0.5
TTC39A-203ENST00000371747 V9GYY9 64 aa11.92□□□□□ -0.5
TTC39A-203ENST00000371747 A8MUN3 132 aa11.91□□□□□ -0.5
TTC39A-203ENST00000371747 LPAP08519 4548 aa11.89□□□□□ -0.51
TTC39A-203ENST00000371747 KRTAP3-1Q9BYR8 98 aa11.85□□□□□ -0.51
TTC39A-203ENST00000371747 LRP2P98164 4655 aa11.85□□□□□ -0.51
TTC39A-203ENST00000371747 PSPHP1O15172 72 aa11.83□□□□□ -0.52
TTC39A-203ENST00000371747 COX6B2Q6YFQ2 88 aa11.79□□□□□ -0.52
TTC39A-203ENST00000371747 LINC01558Q9Y6Z2 57 aa11.79□□□□□ -0.52
TTC39A-203ENST00000371747 HERC1Q15751 4861 aa11.76□□□□□ -0.53
TTC39A-203ENST00000371747 PRR15LQ9BU68 103 aa11.74□□□□□ -0.53
TTC39A-203ENST00000371747 Q5VV11 94 aa11.71□□□□□ -0.53
TTC39A-203ENST00000371747 HMCN2Q8NDA2 5059 aa11.59□□□□□ -0.55
TTC39A-203ENST00000371747 SPTSSBQ8NFR3 76 aa11.59□□□□□ -0.55
TTC39A-203ENST00000371747 SEC61BP60468 96 aaKnown RBP11.57□□□□□ -0.56
TTC39A-203ENST00000371747 A0A1B0GU69 56 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms