RNA–Protein interactions for RNA: ENST00000371747.7

TTC39A-203, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 2 BASIC

Gene TTC39A, Length 1,876 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-203ENST00000371747 TMEM254Q8TBM7 123 aa13.11□□□□□ -0.31
TTC39A-203ENST00000371747 C4orf48Q5BLP8 95 aa13.09□□□□□ -0.31
TTC39A-203ENST00000371747 LIMD2Q9BT23 127 aa13.08□□□□□ -0.32
TTC39A-203ENST00000371747 C1orf195Q5TG92 126 aa13.07□□□□□ -0.32
TTC39A-203ENST00000371747 KIAA1109Q2LD37 5005 aa13.05□□□□□ -0.32
TTC39A-203ENST00000371747 KRTAP17-1Q9BYP8 105 aa13.05□□□□□ -0.32
TTC39A-203ENST00000371747 A0A0U1RQV1 116 aa13.04□□□□□ -0.32
TTC39A-203ENST00000371747 SPINK1P00995 79 aa13.04□□□□□ -0.32
TTC39A-203ENST00000371747 NOTCH2NLQ7Z3S9 236 aa13.04□□□□□ -0.32
TTC39A-203ENST00000371747 FAM229AH3BQW9 127 aa13.03□□□□□ -0.32
TTC39A-203ENST00000371747 C5orf47Q569G3 176 aa13.02□□□□□ -0.32
TTC39A-203ENST00000371747 PKHD1L1Q86WI1 4243 aa13.02□□□□□ -0.33
TTC39A-203ENST00000371747 LINC00304Q8N9R0 145 aa13.02□□□□□ -0.33
TTC39A-203ENST00000371747 H7BZZ5 65 aa13.01□□□□□ -0.33
TTC39A-203ENST00000371747 TMEM258P61165 79 aa13□□□□□ -0.33
TTC39A-203ENST00000371747 Q5VSD8 79 aa12.99□□□□□ -0.33
TTC39A-203ENST00000371747 SPAG11AQ6PDA7 123 aa12.97□□□□□ -0.33
TTC39A-203ENST00000371747 MRPL34Q9BQ48 92 aaKnown RBP12.96□□□□□ -0.33
TTC39A-203ENST00000371747 NDUFC1O43677 76 aa12.95□□□□□ -0.34
TTC39A-203ENST00000371747 RPS29P62273 56 aaKnown RBP12.95□□□□□ -0.34
TTC39A-203ENST00000371747 C8orf87E5RJ46 101 aa12.94□□□□□ -0.34
TTC39A-203ENST00000371747 ZCCHC13Q8WW36 166 aaKnown RBP12.91□□□□□ -0.34
TTC39A-203ENST00000371747 MP68P56378 58 aa12.91□□□□□ -0.34
TTC39A-203ENST00000371747 TP53AIP1Q9HCN2 124 aa12.91□□□□□ -0.34
TTC39A-203ENST00000371747 H0Y9P7 68 aa12.89□□□□□ -0.35
TTC39A-203ENST00000371747 NDUFS5O43920 106 aa12.89□□□□□ -0.35
TTC39A-203ENST00000371747 LINC00313P59037 77 aa12.89□□□□□ -0.35
TTC39A-203ENST00000371747 Q8N1X5 172 aa12.86□□□□□ -0.35
TTC39A-203ENST00000371747 TRAV22A0A0B4J277 110 aa12.85□□□□□ -0.35
TTC39A-203ENST00000371747 LINC00208Q96KT6 92 aa12.85□□□□□ -0.35
TTC39A-203ENST00000371747 FAM236DA0A1B0GTK5 79 aa12.83□□□□□ -0.36
TTC39A-203ENST00000371747 FAM236CP0DP71 79 aa12.83□□□□□ -0.36
TTC39A-203ENST00000371747 H3BPC8 53 aa12.82□□□□□ -0.36
TTC39A-203ENST00000371747 LRP1Q07954 4544 aaKnown RBP12.78□□□□□ -0.36
TTC39A-203ENST00000371747 C1orf64Q8NEQ6 169 aa12.77□□□□□ -0.37
TTC39A-203ENST00000371747 KRTAP16-1A8MUX0 517 aa12.76□□□□□ -0.37
TTC39A-203ENST00000371747 Q8N9P0 234 aaPredicted RBP12.74□□□□□ -0.37
TTC39A-203ENST00000371747 TNXBP22105 4242 aa12.72□□□□□ -0.37
TTC39A-203ENST00000371747 KRTAP10-8P60410 259 aa12.72□□□□□ -0.37
TTC39A-203ENST00000371747 ATP5EP56381 51 aaPredicted RBP12.71□□□□□ -0.37
TTC39A-203ENST00000371747 FAT3Q8TDW7 4589 aa12.7□□□□□ -0.38
TTC39A-203ENST00000371747 Q5W150 140 aa12.7□□□□□ -0.38
TTC39A-203ENST00000371747 BIRC6Q9NR09 4857 aa12.68□□□□□ -0.38
TTC39A-203ENST00000371747 RPS28P62857 69 aaKnown RBP12.68□□□□□ -0.38
TTC39A-203ENST00000371747 KRTAP4-5Q9BYR2 181 aa12.68□□□□□ -0.38
TTC39A-203ENST00000371747 KRTAP13-3Q3SY46 172 aa12.67□□□□□ -0.38
TTC39A-203ENST00000371747 FLG2Q5D862 2391 aaPredicted RBP12.66□□□□□ -0.38
TTC39A-203ENST00000371747 RETNLBQ9BQ08 111 aa12.63□□□□□ -0.39
TTC39A-203ENST00000371747 SERP1Q9Y6X1 66 aa12.61□□□□□ -0.39
TTC39A-203ENST00000371747 OXTP01178 125 aa12.59□□□□□ -0.39
TTC39A-203ENST00000371747 MYCBP2O75592 4640 aa12.58□□□□□ -0.4
TTC39A-203ENST00000371747 LOC101927531A0A1B0GV80 90 aa12.57□□□□□ -0.4
TTC39A-203ENST00000371747 PCOTHQ58A44 107 aa12.55□□□□□ -0.4
TTC39A-203ENST00000371747 SPANXA2-OT1Q8N9U9 137 aa12.55□□□□□ -0.4
TTC39A-203ENST00000371747 PRR4Q16378 134 aa12.54□□□□□ -0.4
TTC39A-203ENST00000371747 C9orf92A6NGG3 77 aa12.53□□□□□ -0.4
TTC39A-203ENST00000371747 MT1HL1P0DM35 61 aa12.53□□□□□ -0.4
TTC39A-203ENST00000371747 CYP4F30PQ9H0H9 118 aa12.53□□□□□ -0.4
TTC39A-203ENST00000371747 HERC2O95714 4834 aa12.52□□□□□ -0.41
TTC39A-203ENST00000371747 IGLV7-46A0A075B6I9 117 aa12.46□□□□□ -0.42
TTC39A-203ENST00000371747 ABCA13Q86UQ4 5058 aa12.44□□□□□ -0.42
TTC39A-203ENST00000371747 DMBT1Q9UGM3 2413 aaPredicted RBP12.43□□□□□ -0.42
TTC39A-203ENST00000371747 IGKV2-30P06310 120 aa12.43□□□□□ -0.42
TTC39A-203ENST00000371747 C20orf166-AS1Q96NR2 134 aa12.42□□□□□ -0.42
TTC39A-203ENST00000371747 A8MUU9 505 aa12.41□□□□□ -0.42
TTC39A-203ENST00000371747 FP248Q71RG6 208 aaPredicted RBP12.39□□□□□ -0.43
TTC39A-203ENST00000371747 IGKV2D-30A0A075B6S6 120 aa12.33□□□□□ -0.44
TTC39A-203ENST00000371747 SMIM26A0A096LP01 95 aa12.31□□□□□ -0.44
TTC39A-203ENST00000371747 HRES1P13985 223 aa12.31□□□□□ -0.44
TTC39A-203ENST00000371747 Q75L30 129 aa12.27□□□□□ -0.44
TTC39A-203ENST00000371747 C7orf65Q6ZTY9 151 aa12.23□□□□□ -0.45
TTC39A-203ENST00000371747 COA5Q86WW8 74 aa12.21□□□□□ -0.46
TTC39A-203ENST00000371747 DMAC1Q96GE9 116 aa12.14□□□□□ -0.47
TTC39A-203ENST00000371747 XP32Q5T750 250 aa12.14□□□□□ -0.47
TTC39A-203ENST00000371747 J3QL48 77 aa12.12□□□□□ -0.47
TTC39A-203ENST00000371747 ACYP2P14621 99 aa12.1□□□□□ -0.47
TTC39A-203ENST00000371747 RPL37P61927 97 aaKnown RBP12.1□□□□□ -0.47
TTC39A-203ENST00000371747 MPLKIPQ8TAP9 179 aa12.1□□□□□ -0.47
TTC39A-203ENST00000371747 C4orf26Q17RF5 130 aa12.08□□□□□ -0.48
TTC39A-203ENST00000371747 ATP11AUNQ6ZP68 121 aa12.08□□□□□ -0.48
TTC39A-203ENST00000371747 SPINK7P58062 85 aa12.07□□□□□ -0.48
TTC39A-203ENST00000371747 PCLOQ9Y6V0 5065 aa12.04□□□□□ -0.48
TTC39A-203ENST00000371747 Q1T7F1 81 aa12.02□□□□□ -0.49
TTC39A-203ENST00000371747 TPRXLQ17RH7 258 aa12□□□□□ -0.49
TTC39A-203ENST00000371747 CHKB-CPT1BH3BT56 60 aa11.93□□□□□ -0.5
TTC39A-203ENST00000371747 V9GYY9 64 aa11.92□□□□□ -0.5
TTC39A-203ENST00000371747 A8MUN3 132 aa11.91□□□□□ -0.5
TTC39A-203ENST00000371747 LPAP08519 4548 aa11.89□□□□□ -0.51
TTC39A-203ENST00000371747 KRTAP3-1Q9BYR8 98 aa11.85□□□□□ -0.51
TTC39A-203ENST00000371747 LRP2P98164 4655 aa11.85□□□□□ -0.51
TTC39A-203ENST00000371747 PSPHP1O15172 72 aa11.83□□□□□ -0.52
TTC39A-203ENST00000371747 COX6B2Q6YFQ2 88 aa11.79□□□□□ -0.52
TTC39A-203ENST00000371747 LINC01558Q9Y6Z2 57 aa11.79□□□□□ -0.52
TTC39A-203ENST00000371747 HERC1Q15751 4861 aa11.76□□□□□ -0.53
TTC39A-203ENST00000371747 PRR15LQ9BU68 103 aa11.74□□□□□ -0.53
TTC39A-203ENST00000371747 Q5VV11 94 aa11.71□□□□□ -0.53
TTC39A-203ENST00000371747 HMCN2Q8NDA2 5059 aa11.59□□□□□ -0.55
TTC39A-203ENST00000371747 SPTSSBQ8NFR3 76 aa11.59□□□□□ -0.55
TTC39A-203ENST00000371747 SEC61BP60468 96 aaKnown RBP11.57□□□□□ -0.56
TTC39A-203ENST00000371747 A0A1B0GU69 56 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 128.2 ms