RNA–Protein interactions for RNA: ENST00000371123.5

SMARCA1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMARCA1, Length 3,948 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-203ENST00000371123 PANO1I0J062 215 aa5.34□□□□□ -1.55
SMARCA1-203ENST00000371123 PRR26Q8N8Z3 221 aa5.34□□□□□ -1.55
SMARCA1-203ENST00000371123 C14orf177Q52M58 125 aa5.32□□□□□ -1.56
SMARCA1-203ENST00000371123 H3BS24 57 aa5.32□□□□□ -1.56
SMARCA1-203ENST00000371123 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.32□□□□□ -1.56
SMARCA1-203ENST00000371123 ASB16-AS1Q495Z4 193 aa5.31□□□□□ -1.56
SMARCA1-203ENST00000371123 Q96NJ1 140 aa5.31□□□□□ -1.56
SMARCA1-203ENST00000371123 DNAH17Q9UFH2 4485 aa5.31□□□□□ -1.56
SMARCA1-203ENST00000371123 PLA2G2DQ9UNK4 145 aa5.3□□□□□ -1.56
SMARCA1-203ENST00000371123 HUWE1Q7Z6Z7 4374 aaKnown RBP5.3□□□□□ -1.56
SMARCA1-203ENST00000371123 DNHD1Q96M86 4753 aa5.3□□□□□ -1.56
SMARCA1-203ENST00000371123 SMR3BP02814 79 aaPredicted RBP5.29□□□□□ -1.56
SMARCA1-203ENST00000371123 NBDYA0A0U1RRE5 68 aa5.29□□□□□ -1.56
SMARCA1-203ENST00000371123 KMT2AQ03164 3969 aa5.29□□□□□ -1.56
SMARCA1-203ENST00000371123 A0A087X002 238 aa5.29□□□□□ -1.56
SMARCA1-203ENST00000371123 NOTCH2NLQ7Z3S9 236 aa5.29□□□□□ -1.56
SMARCA1-203ENST00000371123 TLX1NBP0CAT3 122 aa5.29□□□□□ -1.56
SMARCA1-203ENST00000371123 VPS13DQ5THJ4 4388 aa5.28□□□□□ -1.56
SMARCA1-203ENST00000371123 A8MWP4 228 aa5.28□□□□□ -1.56
SMARCA1-203ENST00000371123 RTL8CO15255 209 aa5.28□□□□□ -1.56
SMARCA1-203ENST00000371123 HECTD4Q9Y4D8 3996 aa5.27□□□□□ -1.57
SMARCA1-203ENST00000371123 H3BPC8 53 aa5.27□□□□□ -1.57
SMARCA1-203ENST00000371123 PSORS1C2Q9UIG4 136 aa5.27□□□□□ -1.57
SMARCA1-203ENST00000371123 H3BNG1 76 aa5.26□□□□□ -1.57
SMARCA1-203ENST00000371123 MEGF8Q7Z7M0 2845 aa5.25□□□□□ -1.57
SMARCA1-203ENST00000371123 Q6ZR54 194 aa5.25□□□□□ -1.57
SMARCA1-203ENST00000371123 PLA2G1BP04054 148 aaKnown RBP5.24□□□□□ -1.57
SMARCA1-203ENST00000371123 C1orf134Q5TEV5 83 aa5.24□□□□□ -1.57
SMARCA1-203ENST00000371123 LINC01554Q52M75 96 aa5.23□□□□□ -1.57
SMARCA1-203ENST00000371123 Q5W150 140 aa5.23□□□□□ -1.57
SMARCA1-203ENST00000371123 C8orf17Q9NRJ1 99 aa5.22□□□□□ -1.57
SMARCA1-203ENST00000371123 C9orf92A6NGG3 77 aa5.22□□□□□ -1.57
SMARCA1-203ENST00000371123 KRTAP13-3Q3SY46 172 aa5.22□□□□□ -1.57
SMARCA1-203ENST00000371123 Q8N1X5 172 aa5.22□□□□□ -1.57
SMARCA1-203ENST00000371123 DYNC2H1Q8NCM8 4307 aaKnown RBP5.2□□□□□ -1.58
SMARCA1-203ENST00000371123 NUPR2A6NF83 97 aa5.19□□□□□ -1.58
SMARCA1-203ENST00000371123 A0A087WTM6 91 aa5.18□□□□□ -1.58
SMARCA1-203ENST00000371123 MRPL34Q9BQ48 92 aaKnown RBP5.18□□□□□ -1.58
SMARCA1-203ENST00000371123 APLNQ9ULZ1 77 aa5.18□□□□□ -1.58
SMARCA1-203ENST00000371123 A0A1B0GU69 56 aa5.17□□□□□ -1.58
SMARCA1-203ENST00000371123 CRIPTQ9P021 101 aa5.17□□□□□ -1.58
SMARCA1-203ENST00000371123 ZNF706Q9Y5V0 76 aaPredicted RBP5.17□□□□□ -1.58
SMARCA1-203ENST00000371123 PLECQ15149 4684 aaKnown RBP5.16□□□□□ -1.58
SMARCA1-203ENST00000371123 SPRR1BP22528 89 aa5.16□□□□□ -1.58
SMARCA1-203ENST00000371123 CSAG1Q6PB30 78 aa5.16□□□□□ -1.58
SMARCA1-203ENST00000371123 A0A1B0GVX0 72 aa5.15□□□□□ -1.58
SMARCA1-203ENST00000371123 DNAH2Q9P225 4427 aa5.14□□□□□ -1.59
SMARCA1-203ENST00000371123 ZNF861PO60384 105 aa5.13□□□□□ -1.59
SMARCA1-203ENST00000371123 SPATA8Q6RVD6 105 aa5.13□□□□□ -1.59
SMARCA1-203ENST00000371123 PRKDCP78527 4128 aaKnown RBP5.13□□□□□ -1.59
SMARCA1-203ENST00000371123 KRTAP13-1Q8IUC0 172 aa5.11□□□□□ -1.59
SMARCA1-203ENST00000371123 DNAH6Q9C0G6 4158 aa5.11□□□□□ -1.59
SMARCA1-203ENST00000371123 TYMSOSQ8TAI1 123 aa5.1□□□□□ -1.59
SMARCA1-203ENST00000371123 ACYP2P14621 99 aa5.09□□□□□ -1.59
SMARCA1-203ENST00000371123 TP53AIP1Q9HCN2 124 aa5.08□□□□□ -1.6
SMARCA1-203ENST00000371123 KRTAP10-2P60368 255 aa5.08□□□□□ -1.6
SMARCA1-203ENST00000371123 IGLV7-43P04211 117 aa5.07□□□□□ -1.6
SMARCA1-203ENST00000371123 A0A0D9SG42 100 aa5.05□□□□□ -1.6
SMARCA1-203ENST00000371123 DMAC1Q96GE9 116 aa5.04□□□□□ -1.6
SMARCA1-203ENST00000371123 DNAH11Q96DT5 4516 aa5.04□□□□□ -1.6
SMARCA1-203ENST00000371123 WWC2-AS2Q96NR7 200 aa5.03□□□□□ -1.6
SMARCA1-203ENST00000371123 STARD9Q9P2P6 4700 aa5.03□□□□□ -1.6
SMARCA1-203ENST00000371123 MIR22HGQ0VDD5 57 aa5.02□□□□□ -1.61
SMARCA1-203ENST00000371123 P0C880 135 aa5.01□□□□□ -1.61
SMARCA1-203ENST00000371123 FAT2Q9NYQ8 4349 aa4.99□□□□□ -1.61
SMARCA1-203ENST00000371123 SSBP3-AS1Q7Z2R9 100 aa4.99□□□□□ -1.61
SMARCA1-203ENST00000371123 FAM229AH3BQW9 127 aa4.99□□□□□ -1.61
SMARCA1-203ENST00000371123 LINC00483Q53H64 154 aa4.98□□□□□ -1.61
SMARCA1-203ENST00000371123 KRTAP10-1P60331 282 aa4.97□□□□□ -1.61
SMARCA1-203ENST00000371123 UQCR11O14957 56 aa4.96□□□□□ -1.62
SMARCA1-203ENST00000371123 DNAH5Q8TE73 4624 aa4.95□□□□□ -1.62
SMARCA1-203ENST00000371123 H0YAA0 97 aa4.95□□□□□ -1.62
SMARCA1-203ENST00000371123 ROMO1P60602 79 aa4.94□□□□□ -1.62
SMARCA1-203ENST00000371123 LINC00304Q8N9R0 145 aa4.93□□□□□ -1.62
SMARCA1-203ENST00000371123 LRP1BQ9NZR2 4599 aa4.93□□□□□ -1.62
SMARCA1-203ENST00000371123 A8MUU9 505 aa4.93□□□□□ -1.62
SMARCA1-203ENST00000371123 KRTAP16-1A8MUX0 517 aa4.91□□□□□ -1.62
SMARCA1-203ENST00000371123 Q6ZSA8 131 aa4.91□□□□□ -1.62
SMARCA1-203ENST00000371123 K7ERS5 55 aa4.91□□□□□ -1.62
SMARCA1-203ENST00000371123 KRTAP25-1Q3LHN0 102 aa4.91□□□□□ -1.62
SMARCA1-203ENST00000371123 Q6ZRN7 208 aaPredicted RBP4.91□□□□□ -1.62
SMARCA1-203ENST00000371123 VPS13BQ7Z7G8 4022 aa4.88□□□□□ -1.63
SMARCA1-203ENST00000371123 PKD1P98161 4303 aa4.87□□□□□ -1.63
SMARCA1-203ENST00000371123 PKHD1P08F94 4074 aa4.87□□□□□ -1.63
SMARCA1-203ENST00000371123 KRTAP13-2Q52LG2 175 aa4.86□□□□□ -1.63
SMARCA1-203ENST00000371123 SPINT4Q6UDR6 99 aa4.85□□□□□ -1.63
SMARCA1-203ENST00000371123 SACSQ9NZJ4 4579 aa4.82□□□□□ -1.64
SMARCA1-203ENST00000371123 A0A1B0GU33 70 aa4.79□□□□□ -1.64
SMARCA1-203ENST00000371123 RYR2Q92736 4967 aa4.79□□□□□ -1.64
SMARCA1-203ENST00000371123 KRTAP3-1Q9BYR8 98 aa4.79□□□□□ -1.64
SMARCA1-203ENST00000371123 HYDINQ4G0P3 5121 aa4.77□□□□□ -1.65
SMARCA1-203ENST00000371123 TPRXLQ17RH7 258 aa4.75□□□□□ -1.65
SMARCA1-203ENST00000371123 KMT2CQ8NEZ4 4911 aaKnown RBP4.71□□□□□ -1.65
SMARCA1-203ENST00000371123 MYCBP2O75592 4640 aa4.7□□□□□ -1.66
SMARCA1-203ENST00000371123 KRTAP15-1Q3LI76 137 aa4.69□□□□□ -1.66
SMARCA1-203ENST00000371123 RYR3Q15413 4870 aa4.69□□□□□ -1.66
SMARCA1-203ENST00000371123 C10orf95Q9H7T3 257 aa4.68□□□□□ -1.66
SMARCA1-203ENST00000371123 KRTAP13-4Q3LI77 160 aa4.68□□□□□ -1.66
SMARCA1-203ENST00000371123 PKHD1L1Q86WI1 4243 aa4.68□□□□□ -1.66
SMARCA1-203ENST00000371123 H1FX-AS1Q4G0G2 97 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms