RNA–Protein interactions for RNA: ENST00000369603.9

SMNDC1-202, Transcript of survival motor neuron domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMNDC1, Length 4,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-202ENST00000369603 TENM3Q9P273 2699 aa3.17□□□□□ -1.9
SMNDC1-202ENST00000369603 SVEP1Q4LDE5 3571 aa3.16□□□□□ -1.9
SMNDC1-202ENST00000369603 LCA10Q71F78 164 aa3.16□□□□□ -1.9
SMNDC1-202ENST00000369603 SPENQ96T58 3664 aaKnown RBP3.16□□□□□ -1.9
SMNDC1-202ENST00000369603 C9orf92A6NGG3 77 aa3.15□□□□□ -1.9
SMNDC1-202ENST00000369603 KRTAP29-1A8MX34 341 aaPredicted RBP3.15□□□□□ -1.91
SMNDC1-202ENST00000369603 ASB16-AS1Q495Z4 193 aa3.14□□□□□ -1.91
SMNDC1-202ENST00000369603 LINC01558Q9Y6Z2 57 aa3.14□□□□□ -1.91
SMNDC1-202ENST00000369603 VWFP04275 2813 aa3.14□□□□□ -1.91
SMNDC1-202ENST00000369603 UQCR11O14957 56 aa3.13□□□□□ -1.91
SMNDC1-202ENST00000369603 J3QL48 77 aa3.12□□□□□ -1.91
SMNDC1-202ENST00000369603 NBPF19A0A087WUL8 3843 aa3.12□□□□□ -1.91
SMNDC1-202ENST00000369603 MIR22HGQ0VDD5 57 aa3.12□□□□□ -1.91
SMNDC1-202ENST00000369603 SPINK7P58062 85 aa3.12□□□□□ -1.91
SMNDC1-202ENST00000369603 A8MU10 97 aa3.12□□□□□ -1.91
SMNDC1-202ENST00000369603 HRES1P13985 223 aa3.12□□□□□ -1.91
SMNDC1-202ENST00000369603 A0A087X002 238 aa3.11□□□□□ -1.91
SMNDC1-202ENST00000369603 ANK3Q12955 4377 aaKnown RBP3.11□□□□□ -1.91
SMNDC1-202ENST00000369603 RPS29P62273 56 aaKnown RBP3.11□□□□□ -1.91
SMNDC1-202ENST00000369603 Q5W150 140 aa3.1□□□□□ -1.91
SMNDC1-202ENST00000369603 PRAC1Q96KF2 57 aa3.1□□□□□ -1.91
SMNDC1-202ENST00000369603 CUBNO60494 3623 aa3.1□□□□□ -1.91
SMNDC1-202ENST00000369603 Q6ZSA8 131 aa3.1□□□□□ -1.91
SMNDC1-202ENST00000369603 Q5VSD8 79 aa3.09□□□□□ -1.92
SMNDC1-202ENST00000369603 KRTAP13-2Q52LG2 175 aa3.07□□□□□ -1.92
SMNDC1-202ENST00000369603 Q8N1X5 172 aa3.07□□□□□ -1.92
SMNDC1-202ENST00000369603 CSMD2Q7Z408 3487 aa3.06□□□□□ -1.92
SMNDC1-202ENST00000369603 A6NN06 94 aa3.05□□□□□ -1.92
SMNDC1-202ENST00000369603 LINC01554Q52M75 96 aa3.05□□□□□ -1.92
SMNDC1-202ENST00000369603 FBN1P35555 2871 aaKnown RBP3.05□□□□□ -1.92
SMNDC1-202ENST00000369603 A0A0A0MQY5 61 aa3.05□□□□□ -1.92
SMNDC1-202ENST00000369603 NOTCH2NLQ7Z3S9 236 aa3.05□□□□□ -1.92
SMNDC1-202ENST00000369603 DMAC1Q96GE9 116 aa3.04□□□□□ -1.92
SMNDC1-202ENST00000369603 DMBT1Q9UGM3 2413 aaPredicted RBP3.02□□□□□ -1.93
SMNDC1-202ENST00000369603 KRTAP1-4P0C5Y4 121 aa3.01□□□□□ -1.93
SMNDC1-202ENST00000369603 CSAG1Q6PB30 78 aa3□□□□□ -1.93
SMNDC1-202ENST00000369603 KRTAP17-1Q9BYP8 105 aa3□□□□□ -1.93
SMNDC1-202ENST00000369603 COX6B2Q6YFQ2 88 aa3□□□□□ -1.93
SMNDC1-202ENST00000369603 PKD1L1Q8TDX9 2849 aa3□□□□□ -1.93
SMNDC1-202ENST00000369603 TENM2Q9NT68 2774 aa2.99□□□□□ -1.93
SMNDC1-202ENST00000369603 TGP01266 2768 aa2.99□□□□□ -1.93
SMNDC1-202ENST00000369603 ADM2Q7Z4H4 148 aa2.98□□□□□ -1.93
SMNDC1-202ENST00000369603 TRRAPQ9Y4A5 3859 aa2.98□□□□□ -1.93
SMNDC1-202ENST00000369603 SEC61BP60468 96 aaKnown RBP2.97□□□□□ -1.93
SMNDC1-202ENST00000369603 SPINT4Q6UDR6 99 aa2.97□□□□□ -1.93
SMNDC1-202ENST00000369603 KRTAP3-3Q9BYR6 98 aa2.97□□□□□ -1.93
SMNDC1-202ENST00000369603 KRTAP3-2Q9BYR7 98 aa2.97□□□□□ -1.93
SMNDC1-202ENST00000369603 A0A1B0GU33 70 aa2.97□□□□□ -1.93
SMNDC1-202ENST00000369603 SPATA8Q6RVD6 105 aa2.97□□□□□ -1.93
SMNDC1-202ENST00000369603 FLG2Q5D862 2391 aaPredicted RBP2.96□□□□□ -1.94
SMNDC1-202ENST00000369603 S4R3F8 94 aa2.95□□□□□ -1.94
SMNDC1-202ENST00000369603 A8MUU9 505 aa2.95□□□□□ -1.94
SMNDC1-202ENST00000369603 C20orf166-AS1Q96NR2 134 aa2.95□□□□□ -1.94
SMNDC1-202ENST00000369603 ZNF469Q96JG9 3925 aaPredicted RBP2.94□□□□□ -1.94
SMNDC1-202ENST00000369603 VPS13CQ709C8 3753 aa2.94□□□□□ -1.94
SMNDC1-202ENST00000369603 A0A1B0GVY2 172 aa2.93□□□□□ -1.94
SMNDC1-202ENST00000369603 RPL37P61927 97 aaKnown RBP2.92□□□□□ -1.94
SMNDC1-202ENST00000369603 A0A0D9SG42 100 aa2.92□□□□□ -1.94
SMNDC1-202ENST00000369603 CRIPTQ9P021 101 aa2.92□□□□□ -1.94
SMNDC1-202ENST00000369603 AKAP9Q99996 3911 aa2.91□□□□□ -1.94
SMNDC1-202ENST00000369603 KRTAP16-1A8MUX0 517 aa2.9□□□□□ -1.94
SMNDC1-202ENST00000369603 SRRM2Q9UQ35 2752 aaKnown RBP2.89□□□□□ -1.95
SMNDC1-202ENST00000369603 H1FX-AS1Q4G0G2 97 aa2.88□□□□□ -1.95
SMNDC1-202ENST00000369603 FBN3Q75N90 2809 aa2.87□□□□□ -1.95
SMNDC1-202ENST00000369603 HUWE1Q7Z6Z7 4374 aaKnown RBP2.86□□□□□ -1.95
SMNDC1-202ENST00000369603 KRTAP13-3Q3SY46 172 aa2.86□□□□□ -1.95
SMNDC1-202ENST00000369603 MEGF8Q7Z7M0 2845 aa2.85□□□□□ -1.95
SMNDC1-202ENST00000369603 KRTAP25-1Q3LHN0 102 aa2.85□□□□□ -1.95
SMNDC1-202ENST00000369603 KRTAP10-8P60410 259 aa2.85□□□□□ -1.95
SMNDC1-202ENST00000369603 XP32Q5T750 250 aa2.85□□□□□ -1.95
SMNDC1-202ENST00000369603 R4GN34 69 aa2.84□□□□□ -1.96
SMNDC1-202ENST00000369603 ROMO1P60602 79 aa2.83□□□□□ -1.96
SMNDC1-202ENST00000369603 TPRXLQ17RH7 258 aa2.83□□□□□ -1.96
SMNDC1-202ENST00000369603 LUZP6Q538Z0 58 aa2.82□□□□□ -1.96
SMNDC1-202ENST00000369603 M0R2T5 61 aa2.81□□□□□ -1.96
SMNDC1-202ENST00000369603 CAMK2N1Q7Z7J9 78 aa2.8□□□□□ -1.96
SMNDC1-202ENST00000369603 M0QZ58 72 aa2.79□□□□□ -1.96
SMNDC1-202ENST00000369603 H0YAA0 97 aa2.78□□□□□ -1.96
SMNDC1-202ENST00000369603 DNAH9Q9NYC9 4486 aa2.78□□□□□ -1.96
SMNDC1-202ENST00000369603 LCE2DQ5TA82 110 aaPredicted RBP2.76□□□□□ -1.97
SMNDC1-202ENST00000369603 COL7A1Q02388 2944 aa2.75□□□□□ -1.97
SMNDC1-202ENST00000369603 KRTAP10-4P60372 401 aaPredicted RBP2.74□□□□□ -1.97
SMNDC1-202ENST00000369603 NDUFAF8A1L188 74 aa2.72□□□□□ -1.97
SMNDC1-202ENST00000369603 ALMS1Q8TCU4 4167 aa2.72□□□□□ -1.97
SMNDC1-202ENST00000369603 C10orf95Q9H7T3 257 aa2.69□□□□□ -1.98
SMNDC1-202ENST00000369603 PLECQ15149 4684 aaKnown RBP2.69□□□□□ -1.98
SMNDC1-202ENST00000369603 MT1HL1P0DM35 61 aa2.68□□□□□ -1.98
SMNDC1-202ENST00000369603 VPS13DQ5THJ4 4388 aa2.68□□□□□ -1.98
SMNDC1-202ENST00000369603 PLAC4Q8WY50 150 aa2.68□□□□□ -1.98
SMNDC1-202ENST00000369603 ANK2Q01484 3957 aa2.68□□□□□ -1.98
SMNDC1-202ENST00000369603 CSMD3Q7Z407 3707 aa2.68□□□□□ -1.98
SMNDC1-202ENST00000369603 KRTAP3-1Q9BYR8 98 aa2.67□□□□□ -1.98
SMNDC1-202ENST00000369603 DNAH1Q9P2D7 4330 aa2.67□□□□□ -1.98
SMNDC1-202ENST00000369603 DNAH3Q8TD57 4116 aa2.66□□□□□ -1.98
SMNDC1-202ENST00000369603 P0C880 135 aa2.64□□□□□ -1.99
SMNDC1-202ENST00000369603 STARD9Q9P2P6 4700 aa2.63□□□□□ -1.99
SMNDC1-202ENST00000369603 DNAH17Q9UFH2 4485 aa2.63□□□□□ -1.99
SMNDC1-202ENST00000369603 DNHD1Q96M86 4753 aa2.62□□□□□ -1.99
SMNDC1-202ENST00000369603 PRKDCP78527 4128 aaKnown RBP2.62□□□□□ -1.99
SMNDC1-202ENST00000369603 DNAH10Q8IVF4 4471 aa2.6□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms