RNA–Protein interactions for RNA: ENST00000367425.8

CFHR3-201, Transcript of complement factor H related 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CFHR3, Length 1,645 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFHR3-201ENST00000367425 NCOR1O75376 2440 aa0.63□□□□□ -2.31
CFHR3-201ENST00000367425 CHD8Q9HCK8 2581 aa0.63□□□□□ -2.31
CFHR3-201ENST00000367425 TNRC18O15417 2968 aaPredicted RBP0.63□□□□□ -2.31
CFHR3-201ENST00000367425 FRYQ5TBA9 3013 aa0.63□□□□□ -2.31
CFHR3-201ENST00000367425 DEFB108AA8MXU0 73 aa0.63□□□□□ -2.31
CFHR3-201ENST00000367425 RPL39P5Q59GN2 51 aa0.63□□□□□ -2.31
CFHR3-201ENST00000367425 RANBP2P49792 3224 aaKnown RBP0.62□□□□□ -2.31
CFHR3-201ENST00000367425 CELSR1Q9NYQ6 3014 aa0.62□□□□□ -2.31
CFHR3-201ENST00000367425 SPENQ96T58 3664 aaKnown RBP0.62□□□□□ -2.31
CFHR3-201ENST00000367425 SZT2Q5T011 3432 aa0.62□□□□□ -2.31
CFHR3-201ENST00000367425 ZFHX4Q86UP3 3567 aa0.62□□□□□ -2.31
CFHR3-201ENST00000367425 NF1P21359 2839 aa0.62□□□□□ -2.31
CFHR3-201ENST00000367425 CFAP54Q96N23 3096 aa0.61□□□□□ -2.31
CFHR3-201ENST00000367425 TENM4Q6N022 2769 aa0.61□□□□□ -2.31
CFHR3-201ENST00000367425 DEFB135Q30KP9 77 aa0.61□□□□□ -2.31
CFHR3-201ENST00000367425 UTP20O75691 2785 aaKnown RBP0.61□□□□□ -2.31
CFHR3-201ENST00000367425 DCHS2Q6V1P9 2916 aa0.61□□□□□ -2.31
CFHR3-201ENST00000367425 SPTBN5Q9NRC6 3674 aaKnown RBP0.6□□□□□ -2.31
CFHR3-201ENST00000367425 M0QZ58 72 aa0.6□□□□□ -2.31
CFHR3-201ENST00000367425 U3KQA8 63 aa0.6□□□□□ -2.31
CFHR3-201ENST00000367425 COL12A1Q99715 3063 aa0.6□□□□□ -2.31
CFHR3-201ENST00000367425 ZZEF1O43149 2961 aa0.6□□□□□ -2.31
CFHR3-201ENST00000367425 MAP1BP46821 2468 aaKnown RBP0.6□□□□□ -2.31
CFHR3-201ENST00000367425 EP300Q09472 2414 aaPredicted RBP0.6□□□□□ -2.31
CFHR3-201ENST00000367425 DMBT1Q9UGM3 2413 aaPredicted RBP0.6□□□□□ -2.31
CFHR3-201ENST00000367425 WNK1Q9H4A3 2382 aa0.6□□□□□ -2.31
CFHR3-201ENST00000367425 KALRNO60229 2985 aa0.6□□□□□ -2.31
CFHR3-201ENST00000367425 RELNP78509 3460 aa0.59□□□□□ -2.31
CFHR3-201ENST00000367425 EPG5Q9HCE0 2579 aa0.59□□□□□ -2.31
CFHR3-201ENST00000367425 ACACAQ13085 2346 aa0.59□□□□□ -2.32
CFHR3-201ENST00000367425 HIVEP3Q5T1R4 2406 aa0.59□□□□□ -2.32
CFHR3-201ENST00000367425 RIF1Q5UIP0 2472 aaKnown RBP0.58□□□□□ -2.32
CFHR3-201ENST00000367425 NAV2Q8IVL1 2488 aa0.58□□□□□ -2.32
CFHR3-201ENST00000367425 SPART-AS1P0CW21 52 aa0.58□□□□□ -2.32
CFHR3-201ENST00000367425 KRTAP21-1Q3LI58 79 aa0.58□□□□□ -2.32
CFHR3-201ENST00000367425 SETXQ7Z333 2677 aaKnown RBP0.58□□□□□ -2.32
CFHR3-201ENST00000367425 PDZD2O15018 2839 aa0.58□□□□□ -2.32
CFHR3-201ENST00000367425 APC2O95996 2303 aa0.58□□□□□ -2.32
CFHR3-201ENST00000367425 USP24Q9UPU5 2620 aa0.58□□□□□ -2.32
CFHR3-201ENST00000367425 MKI67P46013 3256 aaKnown RBP0.57□□□□□ -2.32
CFHR3-201ENST00000367425 PTPN13Q12923 2485 aa0.57□□□□□ -2.32
CFHR3-201ENST00000367425 CEP250Q9BV73 2442 aa0.57□□□□□ -2.32
CFHR3-201ENST00000367425 M0R2T5 61 aa0.57□□□□□ -2.32
CFHR3-201ENST00000367425 FLNCQ14315 2725 aa0.57□□□□□ -2.32
CFHR3-201ENST00000367425 GCN1Q92616 2671 aaKnown RBP0.57□□□□□ -2.32
CFHR3-201ENST00000367425 MDN1Q9NU22 5596 aa0.57□□□□□ -2.32
CFHR3-201ENST00000367425 PRUNE2Q8WUY3 3088 aa0.57□□□□□ -2.32
CFHR3-201ENST00000367425 DMXL1Q9Y485 3027 aa0.57□□□□□ -2.32
CFHR3-201ENST00000367425 UNC79Q9P2D8 2635 aa0.57□□□□□ -2.32
CFHR3-201ENST00000367425 SETD2Q9BYW2 2564 aaPredicted RBP0.57□□□□□ -2.32
CFHR3-201ENST00000367425 HTTP42858 3142 aa0.57□□□□□ -2.32
CFHR3-201ENST00000367425 APELAP0DMC3 54 aa0.56□□□□□ -2.32
CFHR3-201ENST00000367425 HTN1P15515 57 aa0.56□□□□□ -2.32
CFHR3-201ENST00000367425 C5orf42Q9H799 3197 aa0.56□□□□□ -2.32
CFHR3-201ENST00000367425 FAM186AA6NE01 2351 aa0.56□□□□□ -2.32
CFHR3-201ENST00000367425 PKD1L1Q8TDX9 2849 aa0.56□□□□□ -2.32
CFHR3-201ENST00000367425 LRRK2Q5S007 2527 aa0.56□□□□□ -2.32
CFHR3-201ENST00000367425 BSNQ9UPA5 3926 aa0.56□□□□□ -2.32
CFHR3-201ENST00000367425 TNP1P09430 55 aa0.56□□□□□ -2.32
CFHR3-201ENST00000367425 COL6A5A8TX70 2615 aa0.56□□□□□ -2.32
CFHR3-201ENST00000367425 FRYLO94915 3013 aa0.56□□□□□ -2.32
CFHR3-201ENST00000367425 ZFYVE26Q68DK2 2539 aa0.55□□□□□ -2.32
CFHR3-201ENST00000367425 TACC2O95359 2948 aa0.55□□□□□ -2.32
CFHR3-201ENST00000367425 NBEAQ8NFP9 2946 aa0.55□□□□□ -2.32
CFHR3-201ENST00000367425 TRIOO75962 3097 aa0.55□□□□□ -2.32
CFHR3-201ENST00000367425 TENM2Q9NT68 2774 aa0.55□□□□□ -2.32
CFHR3-201ENST00000367425 ATMQ13315 3056 aa0.55□□□□□ -2.32
CFHR3-201ENST00000367425 H3BNG1 76 aa0.55□□□□□ -2.32
CFHR3-201ENST00000367425 DMXL2Q8TDJ6 3036 aa0.55□□□□□ -2.32
CFHR3-201ENST00000367425 MUC3AQ02505 3323 aa0.55□□□□□ -2.32
CFHR3-201ENST00000367425 LAMA5O15230 3695 aa0.55□□□□□ -2.32
CFHR3-201ENST00000367425 CCDC168Q8NDH2 2452 aa0.55□□□□□ -2.32
CFHR3-201ENST00000367425 DMDP11532 3685 aa0.54□□□□□ -2.32
CFHR3-201ENST00000367425 USP9YO00507 2555 aaPredicted RBP0.54□□□□□ -2.32
CFHR3-201ENST00000367425 MTORP42345 2549 aa0.54□□□□□ -2.32
CFHR3-201ENST00000367425 NCOR2Q9Y618 2525 aa0.54□□□□□ -2.32
CFHR3-201ENST00000367425 COL6A3P12111 3177 aa0.54□□□□□ -2.32
CFHR3-201ENST00000367425 A0A096LNI7 61 aa0.54□□□□□ -2.32
CFHR3-201ENST00000367425 H3BUX3 64 aa0.54□□□□□ -2.32
CFHR3-201ENST00000367425 SPTBN4Q9H254 2564 aa0.54□□□□□ -2.32
CFHR3-201ENST00000367425 CUBNO60494 3623 aa0.54□□□□□ -2.32
CFHR3-201ENST00000367425 NBEAL2Q6ZNJ1 2754 aa0.54□□□□□ -2.32
CFHR3-201ENST00000367425 SMG1Q96Q15 3661 aaKnown RBP0.54□□□□□ -2.32
CFHR3-201ENST00000367425 C9orf92A6NGG3 77 aa0.53□□□□□ -2.32
CFHR3-201ENST00000367425 ITPR1Q14643 2758 aa0.53□□□□□ -2.32
CFHR3-201ENST00000367425 CELSR3Q9NYQ7 3312 aa0.53□□□□□ -2.32
CFHR3-201ENST00000367425 SYNE1Q8NF91 8797 aaKnown RBP0.53□□□□□ -2.32
CFHR3-201ENST00000367425 NBPF19A0A087WUL8 3843 aa0.53□□□□□ -2.33
CFHR3-201ENST00000367425 DEFB110Q30KQ9 67 aa0.53□□□□□ -2.33
CFHR3-201ENST00000367425 RHPN1-AS1Q9BWJ2 59 aa0.53□□□□□ -2.33
CFHR3-201ENST00000367425 WDR87Q6ZQQ6 2873 aa0.53□□□□□ -2.33
CFHR3-201ENST00000367425 XIRP2A4UGR9 3374 aa0.52□□□□□ -2.33
CFHR3-201ENST00000367425 DNAH12Q6ZR08 3092 aa0.52□□□□□ -2.33
CFHR3-201ENST00000367425 LYSTQ99698 3801 aa0.52□□□□□ -2.33
CFHR3-201ENST00000367425 ITPR3Q14573 2671 aa0.52□□□□□ -2.33
CFHR3-201ENST00000367425 DEFB1P60022 68 aa0.52□□□□□ -2.33
CFHR3-201ENST00000367425 DNAH11Q96DT5 4516 aa0.52□□□□□ -2.33
CFHR3-201ENST00000367425 ANKRD11Q6UB99 2663 aaPredicted RBP0.52□□□□□ -2.33
CFHR3-201ENST00000367425 LRBAP50851 2863 aa0.51□□□□□ -2.33
CFHR3-201ENST00000367425 ADGRG4Q8IZF6 3080 aa0.51□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms