RNA–Protein interactions for RNA: ENST00000367425.8

CFHR3-201, Transcript of complement factor H related 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CFHR3, Length 1,645 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFHR3-201ENST00000367425 AEBP2Q6ZN18 517 aaPredicted RBP25.57■■□□□ 1.68
CFHR3-201ENST00000367425 CHIC1Q5VXU3 224 aa24.35■■□□□ 1.49
CFHR3-201ENST00000367425 POTEDQ86YR6 584 aa22.82■■□□□ 1.24
CFHR3-201ENST00000367425 SENP3Q9H4L4 574 aaPredicted RBP22.54■■□□□ 1.2
CFHR3-201ENST00000367425 PHF23Q9BUL5 403 aaPredicted RBP21.8■■□□□ 1.08
CFHR3-201ENST00000367425 FOXD1Q16676 465 aa20.93■□□□□ 0.94
CFHR3-201ENST00000367425 MSH5O43196 834 aa20.63■□□□□ 0.89
CFHR3-201ENST00000367425 PIAS4Q8N2W9 510 aaPredicted RBP19.25■□□□□ 0.67
CFHR3-201ENST00000367425 CACNB1Q02641 598 aaPredicted RBP18.67■□□□□ 0.58
CFHR3-201ENST00000367425 PPP6R1Q9UPN7 881 aa18.04■□□□□ 0.48
CFHR3-201ENST00000367425 ADRA2BP18089 450 aa17.95■□□□□ 0.46
CFHR3-201ENST00000367425 POTEHQ6S545 545 aa17.61■□□□□ 0.41
CFHR3-201ENST00000367425 PLPPR3Q6T4P5 718 aa17.61■□□□□ 0.41
CFHR3-201ENST00000367425 DMRT2Q9Y5R5 561 aa17.5■□□□□ 0.39
CFHR3-201ENST00000367425 RNF39Q9H2S5 420 aa17.22■□□□□ 0.35
CFHR3-201ENST00000367425 C1QBPQ07021 282 aaKnown RBP17.07■□□□□ 0.32
CFHR3-201ENST00000367425 SCAF1Q9H7N4 1312 aaKnown RBP16.97■□□□□ 0.31
CFHR3-201ENST00000367425 MAPK8IP2Q13387 824 aaPredicted RBP16.96■□□□□ 0.3
CFHR3-201ENST00000367425 DCAF8L1A6NGE4 600 aa16.86■□□□□ 0.29
CFHR3-201ENST00000367425 DNAJC5BQ9UF47 199 aa16.2■□□□□ 0.18
CFHR3-201ENST00000367425 HOXD11P31277 338 aaPredicted RBP16.16■□□□□ 0.18
CFHR3-201ENST00000367425 SP7Q8TDD2 431 aaPredicted RBP15.72■□□□□ 0.11
CFHR3-201ENST00000367425 RNF216Q9NWF9 866 aaPredicted RBP15.63■□□□□ 0.09
CFHR3-201ENST00000367425 DSG3P32926 999 aa15.49■□□□□ 0.07
CFHR3-201ENST00000367425 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.46■□□□□ 0.07
CFHR3-201ENST00000367425 CNKSR2Q8WXI2 1034 aa15.33■□□□□ 0.04
CFHR3-201ENST00000367425 CHRDL2Q6WN34 429 aa15.28■□□□□ 0.04
CFHR3-201ENST00000367425 CAPN15O75808 1086 aa15.26■□□□□ 0.03
CFHR3-201ENST00000367425 PLSCR2Q9NRY7 297 aa15.26■□□□□ 0.03
CFHR3-201ENST00000367425 RBM42Q9BTD8 480 aaKnown RBP15.18■□□□□ 0.02
CFHR3-201ENST00000367425 PPP4R3CPQ6ZMV5 832 aa15.07■□□□□ 0
CFHR3-201ENST00000367425 KCNA4P22459 653 aa14.99□□□□□ -0.01
CFHR3-201ENST00000367425 SPINK5Q9NQ38 1064 aaPredicted RBP14.97□□□□□ -0.01
CFHR3-201ENST00000367425 HAX1O00165 279 aa14.79□□□□□ -0.04
CFHR3-201ENST00000367425 U3KPZ7 1027 aaPredicted RBP14.74□□□□□ -0.05
CFHR3-201ENST00000367425 APLP2Q06481 763 aa14.74□□□□□ -0.05
CFHR3-201ENST00000367425 LHX8Q68G74 356 aa14.73□□□□□ -0.05
CFHR3-201ENST00000367425 NCBP3Q53F19 620 aaKnown RBP14.71□□□□□ -0.05
CFHR3-201ENST00000367425 ZNF219Q9P2Y4 722 aaPredicted RBP14.66□□□□□ -0.06
CFHR3-201ENST00000367425 ABCB7O75027 752 aa14.58□□□□□ -0.08
CFHR3-201ENST00000367425 TRHP20396 242 aaPredicted RBP14.53□□□□□ -0.08
CFHR3-201ENST00000367425 PIP4P2Q8N4L2 257 aa14.47□□□□□ -0.09
CFHR3-201ENST00000367425 NPM3O75607 178 aaKnown RBP14.44□□□□□ -0.1
CFHR3-201ENST00000367425 SLC4A1APQ9BWU0 796 aaKnown RBP14.37□□□□□ -0.11
CFHR3-201ENST00000367425 EHMT2Q96KQ7 1210 aa14.36□□□□□ -0.11
CFHR3-201ENST00000367425 AKT1S1Q96B36 256 aa14.33□□□□□ -0.12
CFHR3-201ENST00000367425 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.16□□□□□ -0.14
CFHR3-201ENST00000367425 FXR2P51116 673 aaKnown RBP eCLIP14.16□□□□□ -0.14
CFHR3-201ENST00000367425 HNRNPUL2Q1KMD3 747 aaKnown RBP14.16□□□□□ -0.14
CFHR3-201ENST00000367425 PCDH10Q9P2E7 1040 aa14.15□□□□□ -0.14
CFHR3-201ENST00000367425 EVX2Q03828 476 aa14.12□□□□□ -0.15
CFHR3-201ENST00000367425 REM2Q8IYK8 340 aaPredicted RBP14.04□□□□□ -0.16
CFHR3-201ENST00000367425 CSRNP3Q8WYN3 585 aa14.01□□□□□ -0.17
CFHR3-201ENST00000367425 GABBR2O75899 941 aa13.97□□□□□ -0.17
CFHR3-201ENST00000367425 POTEMA6NI47 508 aa13.92□□□□□ -0.18
CFHR3-201ENST00000367425 SAMD1Q6SPF0 538 aaPredicted RBP13.88□□□□□ -0.19
CFHR3-201ENST00000367425 PITPNM1O00562 1244 aa13.86□□□□□ -0.19
CFHR3-201ENST00000367425 POTEGQ6S5H5 508 aa13.81□□□□□ -0.2
CFHR3-201ENST00000367425 C19orf67A6NJJ6 358 aa13.79□□□□□ -0.2
CFHR3-201ENST00000367425 ZBTB22O15209 634 aa13.77□□□□□ -0.21
CFHR3-201ENST00000367425 POLA2Q14181 598 aa13.73□□□□□ -0.21
CFHR3-201ENST00000367425 FOXD4L1Q9NU39 408 aa13.73□□□□□ -0.21
CFHR3-201ENST00000367425 ZBTB12Q9Y330 459 aaPredicted RBP13.68□□□□□ -0.22
CFHR3-201ENST00000367425 CLCN6P51797 869 aa13.61□□□□□ -0.23
CFHR3-201ENST00000367425 PRKAR2AP13861 404 aaKnown RBP13.55□□□□□ -0.24
CFHR3-201ENST00000367425 SLC4A2P04920 1241 aa13.53□□□□□ -0.24
CFHR3-201ENST00000367425 POTEIP0CG38 1075 aa13.48□□□□□ -0.25
CFHR3-201ENST00000367425 OTUD5Q96G74 571 aa13.4□□□□□ -0.26
CFHR3-201ENST00000367425 DCBLD2Q96PD2 775 aa13.4□□□□□ -0.26
CFHR3-201ENST00000367425 MYCNP04198 464 aaPredicted RBP13.37□□□□□ -0.27
CFHR3-201ENST00000367425 OSCARQ8IYS5 282 aa13.29□□□□□ -0.28
CFHR3-201ENST00000367425 ATXN8OSP0DMR3 200 aa13.23□□□□□ -0.29
CFHR3-201ENST00000367425 SPDYE1Q8NFV5 336 aaPredicted RBP13.18□□□□□ -0.3
CFHR3-201ENST00000367425 CLEC11AQ9Y240 323 aa13.09□□□□□ -0.31
CFHR3-201ENST00000367425 MAMSTRQ6ZN01 415 aa13.04□□□□□ -0.32
CFHR3-201ENST00000367425 CD44P16070 742 aaKnown RBP13.03□□□□□ -0.32
CFHR3-201ENST00000367425 FAM163AQ96GL9 167 aaPredicted RBP12.98□□□□□ -0.33
CFHR3-201ENST00000367425 SPDYE2BA6NHP3 402 aa12.95□□□□□ -0.34
CFHR3-201ENST00000367425 SPDYE6P0CI01 402 aa12.95□□□□□ -0.34
CFHR3-201ENST00000367425 SPDYE2Q495Y8 402 aa12.95□□□□□ -0.34
CFHR3-201ENST00000367425 POTEB2H3BUK9 544 aa12.94□□□□□ -0.34
CFHR3-201ENST00000367425 CDAN1Q8IWY9 1227 aa12.94□□□□□ -0.34
CFHR3-201ENST00000367425 ATF5Q9Y2D1 282 aaPredicted RBP12.92□□□□□ -0.34
CFHR3-201ENST00000367425 LCE2DQ5TA82 110 aaPredicted RBP12.84□□□□□ -0.35
CFHR3-201ENST00000367425 CHADLQ6NUI6 762 aa12.84□□□□□ -0.35
CFHR3-201ENST00000367425 MMRN1Q13201 1228 aa12.8□□□□□ -0.36
CFHR3-201ENST00000367425 ZNF579Q8NAF0 562 aaKnown RBP12.79□□□□□ -0.36
CFHR3-201ENST00000367425 SCUBE2Q9NQ36 999 aa12.76□□□□□ -0.37
CFHR3-201ENST00000367425 PRR29P0C7W0 189 aa12.71□□□□□ -0.37
CFHR3-201ENST00000367425 FKBP8Q14318 412 aa12.68□□□□□ -0.38
CFHR3-201ENST00000367425 FARP1Q9Y4F1 1045 aaPredicted RBP12.66□□□□□ -0.38
CFHR3-201ENST00000367425 SPNS2Q8IVW8 549 aa12.62□□□□□ -0.39
CFHR3-201ENST00000367425 C7P10643 843 aa12.6□□□□□ -0.39
CFHR3-201ENST00000367425 SLC39A7Q92504 469 aa12.59□□□□□ -0.39
CFHR3-201ENST00000367425 ZRANB1Q9UGI0 708 aa12.58□□□□□ -0.4
CFHR3-201ENST00000367425 GALR2O43603 387 aaPredicted RBP12.56□□□□□ -0.4
CFHR3-201ENST00000367425 METRNQ9UJH8 293 aa12.55□□□□□ -0.4
CFHR3-201ENST00000367425 FBLN2P98095 1184 aa12.5□□□□□ -0.41
CFHR3-201ENST00000367425 POTEJP0CG39 1038 aa12.44□□□□□ -0.42
CFHR3-201ENST00000367425 SSUH2Q9Y2M2 353 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms