RNA–Protein interactions for RNA: ENST00000367364.5

PTPRC-202, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best) BASIC

Gene PTPRC, Length 1,017 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-202ENST00000367364 A0A1W2PNN7 141 aa1.89□□□□□ -2.11
PTPRC-202ENST00000367364 Q5W150 140 aa1.89□□□□□ -2.11
PTPRC-202ENST00000367364 MRPL34Q9BQ48 92 aaKnown RBP1.89□□□□□ -2.11
PTPRC-202ENST00000367364 SETXQ7Z333 2677 aaKnown RBP1.88□□□□□ -2.11
PTPRC-202ENST00000367364 A0A1B0GVX0 72 aa1.88□□□□□ -2.11
PTPRC-202ENST00000367364 KRTAP12-3P60328 96 aa1.88□□□□□ -2.11
PTPRC-202ENST00000367364 C20orf166-AS1Q96NR2 134 aa1.88□□□□□ -2.11
PTPRC-202ENST00000367364 ASH1LQ9NR48 2969 aaKnown RBP1.87□□□□□ -2.11
PTPRC-202ENST00000367364 A0A087WTM6 91 aa1.87□□□□□ -2.11
PTPRC-202ENST00000367364 NUPR2A6NF83 97 aa1.87□□□□□ -2.11
PTPRC-202ENST00000367364 LY6G6CO95867 125 aa1.87□□□□□ -2.11
PTPRC-202ENST00000367364 CHTF8P0CG12 524 aa1.87□□□□□ -2.11
PTPRC-202ENST00000367364 DEFB130BP0DP73 79 aa1.87□□□□□ -2.11
PTPRC-202ENST00000367364 DEFB130AP0DP74 79 aa1.87□□□□□ -2.11
PTPRC-202ENST00000367364 CASC10Q5T4H9 136 aa1.87□□□□□ -2.11
PTPRC-202ENST00000367364 OTOGQ6ZRI0 2925 aa1.87□□□□□ -2.11
PTPRC-202ENST00000367364 RELNP78509 3460 aa1.86□□□□□ -2.11
PTPRC-202ENST00000367364 MYO9AB2RTY4 2548 aa1.86□□□□□ -2.11
PTPRC-202ENST00000367364 ASPMQ8IZT6 3477 aa1.86□□□□□ -2.11
PTPRC-202ENST00000367364 H0YAA0 97 aa1.86□□□□□ -2.11
PTPRC-202ENST00000367364 LINC01556Q5JQF7 62 aa1.86□□□□□ -2.11
PTPRC-202ENST00000367364 CCL19Q99731 98 aa1.86□□□□□ -2.11
PTPRC-202ENST00000367364 LAMA5O15230 3695 aa1.86□□□□□ -2.11
PTPRC-202ENST00000367364 ATMQ13315 3056 aa1.85□□□□□ -2.11
PTPRC-202ENST00000367364 COL12A1Q99715 3063 aa1.85□□□□□ -2.11
PTPRC-202ENST00000367364 FBN3Q75N90 2809 aa1.85□□□□□ -2.11
PTPRC-202ENST00000367364 Q6ZSA8 131 aa1.85□□□□□ -2.11
PTPRC-202ENST00000367364 DEFB124Q8NES8 71 aa1.85□□□□□ -2.11
PTPRC-202ENST00000367364 LRBAP50851 2863 aa1.85□□□□□ -2.11
PTPRC-202ENST00000367364 NBPF19A0A087WUL8 3843 aa1.85□□□□□ -2.11
PTPRC-202ENST00000367364 K7EIL1 84 aa1.84□□□□□ -2.11
PTPRC-202ENST00000367364 DOPEY1Q5JWR5 2465 aa1.84□□□□□ -2.12
PTPRC-202ENST00000367364 CELSR1Q9NYQ6 3014 aa1.84□□□□□ -2.12
PTPRC-202ENST00000367364 VPS13DQ5THJ4 4388 aa1.83□□□□□ -2.12
PTPRC-202ENST00000367364 DEFB113Q30KQ7 82 aa1.83□□□□□ -2.12
PTPRC-202ENST00000367364 MUC6Q6W4X9 2439 aa1.83□□□□□ -2.12
PTPRC-202ENST00000367364 SVEP1Q4LDE5 3571 aa1.83□□□□□ -2.12
PTPRC-202ENST00000367364 SONP18583 2426 aaKnown RBP1.82□□□□□ -2.12
PTPRC-202ENST00000367364 NAV2Q8IVL1 2488 aa1.82□□□□□ -2.12
PTPRC-202ENST00000367364 FLG2Q5D862 2391 aaPredicted RBP1.82□□□□□ -2.12
PTPRC-202ENST00000367364 USP9XQ93008 2570 aaPredicted RBP1.81□□□□□ -2.12
PTPRC-202ENST00000367364 VPS13CQ709C8 3753 aa1.81□□□□□ -2.12
PTPRC-202ENST00000367364 SPART-AS1P0CW21 52 aa1.81□□□□□ -2.12
PTPRC-202ENST00000367364 PRLHP81277 87 aa1.81□□□□□ -2.12
PTPRC-202ENST00000367364 TPRXLQ17RH7 258 aa1.81□□□□□ -2.12
PTPRC-202ENST00000367364 PSORS1C2Q9UIG4 136 aa1.81□□□□□ -2.12
PTPRC-202ENST00000367364 USP9YO00507 2555 aaPredicted RBP1.81□□□□□ -2.12
PTPRC-202ENST00000367364 UBR5O95071 2799 aaPredicted RBP1.81□□□□□ -2.12
PTPRC-202ENST00000367364 EYSQ5T1H1 3165 aa1.8□□□□□ -2.12
PTPRC-202ENST00000367364 PKD1L2Q7Z442 2459 aa1.8□□□□□ -2.12
PTPRC-202ENST00000367364 DNAH8Q96JB1 4490 aa1.8□□□□□ -2.12
PTPRC-202ENST00000367364 LRRK2Q5S007 2527 aa1.8□□□□□ -2.12
PTPRC-202ENST00000367364 MTORP42345 2549 aa1.79□□□□□ -2.12
PTPRC-202ENST00000367364 TEX15Q9BXT5 2789 aa1.79□□□□□ -2.12
PTPRC-202ENST00000367364 NBDYA0A0U1RRE5 68 aa1.79□□□□□ -2.12
PTPRC-202ENST00000367364 UNC79Q9P2D8 2635 aa1.79□□□□□ -2.12
PTPRC-202ENST00000367364 NF1P21359 2839 aa1.78□□□□□ -2.12
PTPRC-202ENST00000367364 GCN1Q92616 2671 aaKnown RBP1.78□□□□□ -2.12
PTPRC-202ENST00000367364 ZNF462Q96JM2 2506 aa1.78□□□□□ -2.12
PTPRC-202ENST00000367364 TTC28Q96AY4 2481 aa1.78□□□□□ -2.12
PTPRC-202ENST00000367364 A0A096LNI7 61 aa1.78□□□□□ -2.12
PTPRC-202ENST00000367364 H1FX-AS1Q4G0G2 97 aa1.78□□□□□ -2.12
PTPRC-202ENST00000367364 MXRA5Q9NR99 2828 aa1.78□□□□□ -2.12
PTPRC-202ENST00000367364 CHD8Q9HCK8 2581 aa1.77□□□□□ -2.13
PTPRC-202ENST00000367364 A0A1B0GU33 70 aa1.77□□□□□ -2.13
PTPRC-202ENST00000367364 DEFB135Q30KP9 77 aa1.77□□□□□ -2.13
PTPRC-202ENST00000367364 COX6B2Q6YFQ2 88 aa1.77□□□□□ -2.13
PTPRC-202ENST00000367364 PIEZO1Q92508 2521 aa1.77□□□□□ -2.13
PTPRC-202ENST00000367364 UTP20O75691 2785 aaKnown RBP1.76□□□□□ -2.13
PTPRC-202ENST00000367364 DEFB4AO15263 64 aa1.76□□□□□ -2.13
PTPRC-202ENST00000367364 LUZP6Q538Z0 58 aa1.76□□□□□ -2.13
PTPRC-202ENST00000367364 CCDC168Q8NDH2 2452 aa1.76□□□□□ -2.13
PTPRC-202ENST00000367364 ACACBO00763 2458 aa1.75□□□□□ -2.13
PTPRC-202ENST00000367364 ZNF292O60281 2723 aa1.75□□□□□ -2.13
PTPRC-202ENST00000367364 MUC3AQ02505 3323 aa1.75□□□□□ -2.13
PTPRC-202ENST00000367364 CRYBG3Q68DQ2 2970 aa1.75□□□□□ -2.13
PTPRC-202ENST00000367364 EPG5Q9HCE0 2579 aa1.75□□□□□ -2.13
PTPRC-202ENST00000367364 TRRAPQ9Y4A5 3859 aa1.75□□□□□ -2.13
PTPRC-202ENST00000367364 ZANQ9Y493 2812 aa1.75□□□□□ -2.13
PTPRC-202ENST00000367364 CFAP46Q8IYW2 2715 aa1.75□□□□□ -2.13
PTPRC-202ENST00000367364 DYNC2H1Q8NCM8 4307 aaKnown RBP1.75□□□□□ -2.13
PTPRC-202ENST00000367364 DNAH17Q9UFH2 4485 aa1.74□□□□□ -2.13
PTPRC-202ENST00000367364 HIVEP1P15822 2718 aa1.74□□□□□ -2.13
PTPRC-202ENST00000367364 K7ERS5 55 aa1.74□□□□□ -2.13
PTPRC-202ENST00000367364 SPINT4Q6UDR6 99 aa1.74□□□□□ -2.13
PTPRC-202ENST00000367364 NBEAL2Q6ZNJ1 2754 aa1.74□□□□□ -2.13
PTPRC-202ENST00000367364 DNAH10Q8IVF4 4471 aa1.73□□□□□ -2.13
PTPRC-202ENST00000367364 CSMD2Q7Z408 3487 aa1.73□□□□□ -2.13
PTPRC-202ENST00000367364 FBN2P35556 2912 aa1.73□□□□□ -2.13
PTPRC-202ENST00000367364 SSBP3-AS1Q7Z2R9 100 aa1.73□□□□□ -2.13
PTPRC-202ENST00000367364 BDP1A6H8Y1 2624 aa1.72□□□□□ -2.13
PTPRC-202ENST00000367364 DNAH6Q9C0G6 4158 aa1.72□□□□□ -2.13
PTPRC-202ENST00000367364 PRKDCP78527 4128 aaKnown RBP1.72□□□□□ -2.13
PTPRC-202ENST00000367364 DNAH9Q9NYC9 4486 aa1.72□□□□□ -2.13
PTPRC-202ENST00000367364 HTN3P15516 51 aa1.72□□□□□ -2.13
PTPRC-202ENST00000367364 RPL37P61927 97 aaKnown RBP1.72□□□□□ -2.13
PTPRC-202ENST00000367364 CRIPTQ9P021 101 aa1.72□□□□□ -2.13
PTPRC-202ENST00000367364 FRAS1Q86XX4 4008 aa1.72□□□□□ -2.13
PTPRC-202ENST00000367364 ANK2Q01484 3957 aa1.72□□□□□ -2.13
PTPRC-202ENST00000367364 SETD2Q9BYW2 2564 aaPredicted RBP1.71□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 140.7 ms