RNA–Protein interactions for RNA: ENST00000364739.1

RNU4-28P-201, Transcript of RNA, U4 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU4-28P, Length 141 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-28P-201ENST00000364739 SMIM27A0A1W2PRY6 76 aa-1.93□□□□□ -2.72
RNU4-28P-201ENST00000364739 NDUFB1O75438 58 aa-1.93□□□□□ -2.72
RNU4-28P-201ENST00000364739 ARL11Q969Q4 196 aa-1.93□□□□□ -2.72
RNU4-28P-201ENST00000364739 CFAP43Q8NDM7 1665 aa-1.93□□□□□ -2.72
RNU4-28P-201ENST00000364739 TRPM2O94759 1503 aa-1.94□□□□□ -2.72
RNU4-28P-201ENST00000364739 IQCF6A8MYZ5 107 aa-1.94□□□□□ -2.72
RNU4-28P-201ENST00000364739 M0R2Z0 102 aa-1.94□□□□□ -2.72
RNU4-28P-201ENST00000364739 ATOX1O00244 68 aa-1.94□□□□□ -2.72
RNU4-28P-201ENST00000364739 COX6CP09669 75 aa-1.94□□□□□ -2.72
RNU4-28P-201ENST00000364739 WFDC10BQ8IUB3 73 aa-1.94□□□□□ -2.72
RNU4-28P-201ENST00000364739 ANP32BQ92688 251 aaKnown RBP-1.94□□□□□ -2.72
RNU4-28P-201ENST00000364739 C12orf57Q99622 126 aa-1.94□□□□□ -2.72
RNU4-28P-201ENST00000364739 LINC00474Q9P2X8 69 aa-1.94□□□□□ -2.72
RNU4-28P-201ENST00000364739 DIP2BQ9P265 1576 aa-1.94□□□□□ -2.72
RNU4-28P-201ENST00000364739 IGLC6P0CF74 106 aa-1.95□□□□□ -2.72
RNU4-28P-201ENST00000364739 SPTSSAQ969W0 71 aa-1.95□□□□□ -2.72
RNU4-28P-201ENST00000364739 SAR1AQ9NR31 198 aa-1.95□□□□□ -2.72
RNU4-28P-201ENST00000364739 HFM1A2PYH4 1435 aa-1.95□□□□□ -2.72
RNU4-28P-201ENST00000364739 RALGAPBQ86X10 1494 aa-1.95□□□□□ -2.72
RNU4-28P-201ENST00000364739 MROH1Q8NDA8 1641 aa-1.95□□□□□ -2.72
RNU4-28P-201ENST00000364739 UNC13AQ9UPW8 1703 aa-1.96□□□□□ -2.72
RNU4-28P-201ENST00000364739 NDUFB6O95139 128 aa-1.96□□□□□ -2.72
RNU4-28P-201ENST00000364739 IFI27P40305 119 aaPredicted RBP-1.96□□□□□ -2.72
RNU4-28P-201ENST00000364739 CRIP1P50238 77 aa-1.96□□□□□ -2.72
RNU4-28P-201ENST00000364739 DEFB131AP59861 70 aa-1.96□□□□□ -2.72
RNU4-28P-201ENST00000364739 Q56UQ5 140 aa-1.96□□□□□ -2.72
RNU4-28P-201ENST00000364739 RPL13AP3Q6NVV1 102 aa-1.96□□□□□ -2.72
RNU4-28P-201ENST00000364739 ALKAL2Q6UX46 152 aa-1.96□□□□□ -2.72
RNU4-28P-201ENST00000364739 TCEAL4Q96EI5 215 aa-1.96□□□□□ -2.72
RNU4-28P-201ENST00000364739 SMIM2Q9BVW6 85 aa-1.96□□□□□ -2.72
RNU4-28P-201ENST00000364739 MYH4Q9Y623 1939 aa-1.96□□□□□ -2.72
RNU4-28P-201ENST00000364739 INO80Q9ULG1 1556 aaPredicted RBP-1.97□□□□□ -2.72
RNU4-28P-201ENST00000364739 hADV29S1A0JD25 119 aa-1.97□□□□□ -2.72
RNU4-28P-201ENST00000364739 MIF4GDA9UHW6 222 aaKnown RBP-1.97□□□□□ -2.72
RNU4-28P-201ENST00000364739 TMEM262E9PQX1 116 aa-1.97□□□□□ -2.72
RNU4-28P-201ENST00000364739 NDUFA4O00483 81 aa-1.97□□□□□ -2.72
RNU4-28P-201ENST00000364739 DPY30Q9C005 99 aa-1.97□□□□□ -2.72
RNU4-28P-201ENST00000364739 MANBALQ9NQG1 85 aa-1.97□□□□□ -2.72
RNU4-28P-201ENST00000364739 ALS2Q96Q42 1657 aa-1.97□□□□□ -2.73
RNU4-28P-201ENST00000364739 LMTK2Q8IWU2 1503 aa-1.97□□□□□ -2.73
RNU4-28P-201ENST00000364739 FOCADQ5VW36 1801 aa-1.98□□□□□ -2.73
RNU4-28P-201ENST00000364739 A0A1B0GUT8 65 aa-1.98□□□□□ -2.73
RNU4-28P-201ENST00000364739 H3BQ15 152 aa-1.98□□□□□ -2.73
RNU4-28P-201ENST00000364739 DBIP07108 87 aaKnown RBP-1.98□□□□□ -2.73
RNU4-28P-201ENST00000364739 LINC01590Q5TEZ4 76 aa-1.98□□□□□ -2.73
RNU4-28P-201ENST00000364739 C1orf54Q8WWF1 131 aa-1.98□□□□□ -2.73
RNU4-28P-201ENST00000364739 UBL5Q9BZL1 73 aa-1.98□□□□□ -2.73
RNU4-28P-201ENST00000364739 GSKIPQ9P0R6 139 aa-1.98□□□□□ -2.73
RNU4-28P-201ENST00000364739 ARHGAP5Q13017 1502 aa-1.98□□□□□ -2.73
RNU4-28P-201ENST00000364739 CFTRP13569 1480 aa-1.99□□□□□ -2.73
RNU4-28P-201ENST00000364739 MYO5CQ9NQX4 1742 aa-1.99□□□□□ -2.73
RNU4-28P-201ENST00000364739 TRBV25-1A0A075B6N4 114 aa-1.99□□□□□ -2.73
RNU4-28P-201ENST00000364739 D6R8Y8 96 aa-1.99□□□□□ -2.73
RNU4-28P-201ENST00000364739 CYB5AP00167 134 aa-1.99□□□□□ -2.73
RNU4-28P-201ENST00000364739 LINC00032P0C843 101 aa-1.99□□□□□ -2.73
RNU4-28P-201ENST00000364739 MORN2Q502X0 79 aa-1.99□□□□□ -2.73
RNU4-28P-201ENST00000364739 NMES1Q9C002 83 aa-1.99□□□□□ -2.73
RNU4-28P-201ENST00000364739 PRO1854Q9UHT4 67 aa-1.99□□□□□ -2.73
RNU4-28P-201ENST00000364739 TTC37Q6PGP7 1564 aa-1.99□□□□□ -2.73
RNU4-28P-201ENST00000364739 TOP2BQ02880 1626 aa-1.99□□□□□ -2.73
RNU4-28P-201ENST00000364739 EIF2AK4Q9P2K8 1649 aaKnown RBP-1.99□□□□□ -2.73
RNU4-28P-201ENST00000364739 KDM5DQ9BY66 1539 aa-2□□□□□ -2.73
RNU4-28P-201ENST00000364739 DIP2AQ14689 1571 aa-2□□□□□ -2.73
RNU4-28P-201ENST00000364739 F6UZH7 168 aa-2□□□□□ -2.73
RNU4-28P-201ENST00000364739 MPC2O95563 127 aa-2□□□□□ -2.73
RNU4-28P-201ENST00000364739 NBEAP1P0C6P0 100 aa-2□□□□□ -2.73
RNU4-28P-201ENST00000364739 RBP2P50120 134 aa-2□□□□□ -2.73
RNU4-28P-201ENST00000364739 C2orf88Q9BSF0 95 aa-2□□□□□ -2.73
RNU4-28P-201ENST00000364739 PDCD10Q9BUL8 212 aa-2□□□□□ -2.73
RNU4-28P-201ENST00000364739 MROH2AA6NES4 1674 aa-2□□□□□ -2.73
RNU4-28P-201ENST00000364739 ABCC1P33527 1531 aa-2.01□□□□□ -2.73
RNU4-28P-201ENST00000364739 ABCC2Q92887 1545 aa-2.01□□□□□ -2.73
RNU4-28P-201ENST00000364739 GUCA1AP43080 201 aaPredicted RBP-2.01□□□□□ -2.73
RNU4-28P-201ENST00000364739 Q0VG73 95 aa-2.01□□□□□ -2.73
RNU4-28P-201ENST00000364739 C12orf73Q69YU5 71 aa-2.01□□□□□ -2.73
RNU4-28P-201ENST00000364739 KCNQ1DNQ9H478 68 aa-2.01□□□□□ -2.73
RNU4-28P-201ENST00000364739 TCHHQ07283 1943 aa-2.01□□□□□ -2.73
RNU4-28P-201ENST00000364739 LTN1O94822 1766 aa-2.02□□□□□ -2.73
RNU4-28P-201ENST00000364739 SARNPP82979 210 aaKnown RBP-2.02□□□□□ -2.73
RNU4-28P-201ENST00000364739 HMGN3Q15651 99 aa-2.02□□□□□ -2.73
RNU4-28P-201ENST00000364739 PMCHL1Q16048 86 aa-2.02□□□□□ -2.73
RNU4-28P-201ENST00000364739 AIF1LQ9BQI0 150 aa-2.02□□□□□ -2.73
RNU4-28P-201ENST00000364739 MYOM2P54296 1465 aa-2.02□□□□□ -2.73
RNU4-28P-201ENST00000364739 NRKQ7Z2Y5 1582 aa-2.02□□□□□ -2.73
RNU4-28P-201ENST00000364739 ETDCA0A1B0GVM5 59 aa-2.03□□□□□ -2.73
RNU4-28P-201ENST00000364739 GNG11P61952 73 aa-2.03□□□□□ -2.73
RNU4-28P-201ENST00000364739 PLGLAQ15195 96 aa-2.03□□□□□ -2.73
RNU4-28P-201ENST00000364739 CGREF1Q99674 301 aa-2.03□□□□□ -2.73
RNU4-28P-201ENST00000364739 RB1CC1Q8TDY2 1594 aa-2.04□□□□□ -2.74
RNU4-28P-201ENST00000364739 SPANXDQ9BXN6 97 aa-2.04□□□□□ -2.74
RNU4-28P-201ENST00000364739 ABCC6O95255 1503 aa-2.05□□□□□ -2.74
RNU4-28P-201ENST00000364739 GNG14A0A1W2PPG7 69 aa-2.05□□□□□ -2.74
RNU4-28P-201ENST00000364739 UMAD1C9J7I0 102 aa-2.05□□□□□ -2.74
RNU4-28P-201ENST00000364739 H3BUT2 72 aa-2.05□□□□□ -2.74
RNU4-28P-201ENST00000364739 GYPAP02724 150 aa-2.05□□□□□ -2.74
RNU4-28P-201ENST00000364739 S100A12P80511 92 aa-2.05□□□□□ -2.74
RNU4-28P-201ENST00000364739 ETDBQ3ZM63 59 aa-2.05□□□□□ -2.74
RNU4-28P-201ENST00000364739 SPANXCQ9NY87 97 aa-2.05□□□□□ -2.74
RNU4-28P-201ENST00000364739 NAIPQ13075 1403 aa-2.06□□□□□ -2.74
RNU4-28P-201ENST00000364739 UQCRHP07919 91 aa-2.06□□□□□ -2.74
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms