RNA–Protein interactions for RNA: ENST00000360467.5

COL4A2-201, Transcript of collagen type IV alpha 2 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A2, Length 6,281 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A2-201ENST00000360467 C10orf95Q9H7T3 257 aa9.28□□□□□ -0.92
COL4A2-201ENST00000360467 KRTAP10-8P60410 259 aa9.27□□□□□ -0.93
COL4A2-201ENST00000360467 USP34Q70CQ2 3546 aa9.27□□□□□ -0.93
COL4A2-201ENST00000360467 ATMQ13315 3056 aa9.24□□□□□ -0.93
COL4A2-201ENST00000360467 UBR5O95071 2799 aaPredicted RBP9.22□□□□□ -0.93
COL4A2-201ENST00000360467 XP32Q5T750 250 aa9.22□□□□□ -0.93
COL4A2-201ENST00000360467 TACC2O95359 2948 aa9.2□□□□□ -0.94
COL4A2-201ENST00000360467 DMXL2Q8TDJ6 3036 aa9.2□□□□□ -0.94
COL4A2-201ENST00000360467 COL12A1Q99715 3063 aa9.18□□□□□ -0.94
COL4A2-201ENST00000360467 FRYLO94915 3013 aa9.15□□□□□ -0.94
COL4A2-201ENST00000360467 A6NN06 94 aa9.15□□□□□ -0.94
COL4A2-201ENST00000360467 STAB2Q8WWQ8 2551 aa9.15□□□□□ -0.94
COL4A2-201ENST00000360467 ITPR1Q14643 2758 aa9.14□□□□□ -0.95
COL4A2-201ENST00000360467 UTP20O75691 2785 aaKnown RBP9.12□□□□□ -0.95
COL4A2-201ENST00000360467 NSD1Q96L73 2696 aaPredicted RBP9.11□□□□□ -0.95
COL4A2-201ENST00000360467 KRTAP1-4P0C5Y4 121 aa9.11□□□□□ -0.95
COL4A2-201ENST00000360467 EYSQ5T1H1 3165 aa9.11□□□□□ -0.95
COL4A2-201ENST00000360467 KRTAP10-10P60014 251 aa9.11□□□□□ -0.95
COL4A2-201ENST00000360467 NDUFAF8A1L188 74 aa9.1□□□□□ -0.95
COL4A2-201ENST00000360467 APCP25054 2843 aa9.08□□□□□ -0.96
COL4A2-201ENST00000360467 HIVEP1P15822 2718 aa9.08□□□□□ -0.96
COL4A2-201ENST00000360467 ADGRG4Q8IZF6 3080 aa9.07□□□□□ -0.96
COL4A2-201ENST00000360467 KRTAP16-1A8MUX0 517 aa9.06□□□□□ -0.96
COL4A2-201ENST00000360467 KMT2BQ9UMN6 2715 aaPredicted RBP9.06□□□□□ -0.96
COL4A2-201ENST00000360467 ASH1LQ9NR48 2969 aaKnown RBP9.05□□□□□ -0.96
COL4A2-201ENST00000360467 MYO15AQ9UKN7 3530 aa9.05□□□□□ -0.96
COL4A2-201ENST00000360467 TNRC18O15417 2968 aaPredicted RBP8.96□□□□□ -0.98
COL4A2-201ENST00000360467 ASPMQ8IZT6 3477 aa8.94□□□□□ -0.98
COL4A2-201ENST00000360467 TPRXLQ17RH7 258 aa8.92□□□□□ -0.98
COL4A2-201ENST00000360467 ZZEF1O43149 2961 aa8.91□□□□□ -0.98
COL4A2-201ENST00000360467 NBEAQ8NFP9 2946 aa8.88□□□□□ -0.99
COL4A2-201ENST00000360467 DMXL1Q9Y485 3027 aa8.85□□□□□ -0.99
COL4A2-201ENST00000360467 H0YAA0 97 aa8.81□□□□□ -1
COL4A2-201ENST00000360467 KRTAP13-3Q3SY46 172 aa8.81□□□□□ -1
COL4A2-201ENST00000360467 FLNCQ14315 2725 aa8.8□□□□□ -1
COL4A2-201ENST00000360467 WDFY3Q8IZQ1 3526 aa8.79□□□□□ -1
COL4A2-201ENST00000360467 TENM4Q6N022 2769 aa8.78□□□□□ -1
COL4A2-201ENST00000360467 PRO2289Q9P1D8 64 aa8.78□□□□□ -1
COL4A2-201ENST00000360467 CELSR2Q9HCU4 2923 aa8.77□□□□□ -1.01
COL4A2-201ENST00000360467 P0C880 135 aa8.76□□□□□ -1.01
COL4A2-201ENST00000360467 NBPF19A0A087WUL8 3843 aa8.74□□□□□ -1.01
COL4A2-201ENST00000360467 LOC400499M0QZD8 3231 aa8.72□□□□□ -1.01
COL4A2-201ENST00000360467 PP632Q6XCG6 107 aa8.71□□□□□ -1.02
COL4A2-201ENST00000360467 DCHS2Q6V1P9 2916 aa8.67□□□□□ -1.02
COL4A2-201ENST00000360467 RELNP78509 3460 aa8.64□□□□□ -1.03
COL4A2-201ENST00000360467 DCHS1Q96JQ0 3298 aa8.63□□□□□ -1.03
COL4A2-201ENST00000360467 ZFHX4Q86UP3 3567 aa8.61□□□□□ -1.03
COL4A2-201ENST00000360467 TENM2Q9NT68 2774 aa8.57□□□□□ -1.04
COL4A2-201ENST00000360467 HRNRQ86YZ3 2850 aaPredicted RBP8.57□□□□□ -1.04
COL4A2-201ENST00000360467 CELSR1Q9NYQ6 3014 aa8.5□□□□□ -1.05
COL4A2-201ENST00000360467 ZANQ9Y493 2812 aa8.48□□□□□ -1.05
COL4A2-201ENST00000360467 CSMD1Q96PZ7 3565 aa8.47□□□□□ -1.05
COL4A2-201ENST00000360467 LAMA5O15230 3695 aa8.46□□□□□ -1.05
COL4A2-201ENST00000360467 TENM1Q9UKZ4 2725 aa8.45□□□□□ -1.06
COL4A2-201ENST00000360467 FBN2P35556 2912 aa8.45□□□□□ -1.06
COL4A2-201ENST00000360467 KRTAP12-2P59991 146 aa8.45□□□□□ -1.06
COL4A2-201ENST00000360467 NF1P21359 2839 aa8.43□□□□□ -1.06
COL4A2-201ENST00000360467 NIPBLQ6KC79 2804 aaeCLIP8.43□□□□□ -1.06
COL4A2-201ENST00000360467 DMDP11532 3685 aa8.33□□□□□ -1.08
COL4A2-201ENST00000360467 TGP01266 2768 aa8.23□□□□□ -1.09
COL4A2-201ENST00000360467 SMG1Q96Q15 3661 aaKnown RBP8.22□□□□□ -1.09
COL4A2-201ENST00000360467 TENM3Q9P273 2699 aa8.2□□□□□ -1.1
COL4A2-201ENST00000360467 ANK3Q12955 4377 aaKnown RBP8.2□□□□□ -1.1
COL4A2-201ENST00000360467 PKD1L1Q8TDX9 2849 aa8.17□□□□□ -1.1
COL4A2-201ENST00000360467 ZFHX3Q15911 3703 aa8.16□□□□□ -1.1
COL4A2-201ENST00000360467 KRTAP13-4Q3LI77 160 aa8.16□□□□□ -1.1
COL4A2-201ENST00000360467 KRTAP12-1P59990 96 aa8.14□□□□□ -1.11
COL4A2-201ENST00000360467 VWFP04275 2813 aa8.14□□□□□ -1.11
COL4A2-201ENST00000360467 KRTAP15-1Q3LI76 137 aa8.11□□□□□ -1.11
COL4A2-201ENST00000360467 SVEP1Q4LDE5 3571 aa8.1□□□□□ -1.11
COL4A2-201ENST00000360467 KRTAP3-1Q9BYR8 98 aa8.09□□□□□ -1.11
COL4A2-201ENST00000360467 MXRA5Q9NR99 2828 aa8.09□□□□□ -1.11
COL4A2-201ENST00000360467 SPENQ96T58 3664 aaKnown RBP8.08□□□□□ -1.12
COL4A2-201ENST00000360467 CRCT1Q9UGL9 99 aa8.07□□□□□ -1.12
COL4A2-201ENST00000360467 CSMD2Q7Z408 3487 aa8.02□□□□□ -1.13
COL4A2-201ENST00000360467 PDZD2O15018 2839 aa7.97□□□□□ -1.13
COL4A2-201ENST00000360467 KRTAP4-5Q9BYR2 181 aa7.94□□□□□ -1.14
COL4A2-201ENST00000360467 CUBNO60494 3623 aa7.88□□□□□ -1.15
COL4A2-201ENST00000360467 HUWE1Q7Z6Z7 4374 aaKnown RBP7.86□□□□□ -1.15
COL4A2-201ENST00000360467 MT1HL1P0DM35 61 aa7.83□□□□□ -1.16
COL4A2-201ENST00000360467 TRRAPQ9Y4A5 3859 aa7.82□□□□□ -1.16
COL4A2-201ENST00000360467 FBN1P35555 2871 aaKnown RBP7.81□□□□□ -1.16
COL4A2-201ENST00000360467 KRTAP10-6P60371 365 aaPredicted RBP7.78□□□□□ -1.16
COL4A2-201ENST00000360467 BSNQ9UPA5 3926 aa7.76□□□□□ -1.17
COL4A2-201ENST00000360467 MUC3AQ02505 3323 aa7.75□□□□□ -1.17
COL4A2-201ENST00000360467 OTOGQ6ZRI0 2925 aa7.73□□□□□ -1.17
COL4A2-201ENST00000360467 KRTAP10-12P60413 245 aa7.7□□□□□ -1.18
COL4A2-201ENST00000360467 ALMS1Q8TCU4 4167 aa7.69□□□□□ -1.18
COL4A2-201ENST00000360467 VPS13CQ709C8 3753 aa7.67□□□□□ -1.18
COL4A2-201ENST00000360467 FBN3Q75N90 2809 aa7.55□□□□□ -1.2
COL4A2-201ENST00000360467 KRTAP3-3Q9BYR6 98 aa7.55□□□□□ -1.2
COL4A2-201ENST00000360467 MEGF8Q7Z7M0 2845 aa7.52□□□□□ -1.21
COL4A2-201ENST00000360467 KRTAP3-2Q9BYR7 98 aa7.48□□□□□ -1.21
COL4A2-201ENST00000360467 CSMD3Q7Z407 3707 aa7.48□□□□□ -1.21
COL4A2-201ENST00000360467 KRTAP10-4P60372 401 aaPredicted RBP7.48□□□□□ -1.21
COL4A2-201ENST00000360467 SRRM2Q9UQ35 2752 aaKnown RBP7.46□□□□□ -1.22
COL4A2-201ENST00000360467 AKAP9Q99996 3911 aa7.45□□□□□ -1.22
COL4A2-201ENST00000360467 LCE3AQ5TA76 89 aa7.43□□□□□ -1.22
COL4A2-201ENST00000360467 COL7A1Q02388 2944 aa7.4□□□□□ -1.22
COL4A2-201ENST00000360467 KRTAP12-3P60328 96 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms