RNA–Protein interactions for RNA: ENST00000359276.8

CTPS2-201, Transcript of CTP synthase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTPS2, Length 3,629 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS2-201ENST00000359276 LINC01554Q52M75 96 aa9.84□□□□□ -0.83
CTPS2-201ENST00000359276 IGKV2D-30A0A075B6S6 120 aa9.84□□□□□ -0.83
CTPS2-201ENST00000359276 IGKV2-30P06310 120 aa9.84□□□□□ -0.83
CTPS2-201ENST00000359276 MIR22HGQ0VDD5 57 aa9.84□□□□□ -0.83
CTPS2-201ENST00000359276 PLAC8Q9NZF1 115 aa9.83□□□□□ -0.84
CTPS2-201ENST00000359276 UQCR11O14957 56 aa9.8□□□□□ -0.84
CTPS2-201ENST00000359276 FLG2Q5D862 2391 aaPredicted RBP9.79□□□□□ -0.84
CTPS2-201ENST00000359276 PSORS1C2Q9UIG4 136 aa9.79□□□□□ -0.84
CTPS2-201ENST00000359276 H3BS24 57 aa9.78□□□□□ -0.84
CTPS2-201ENST00000359276 RTL8CO15255 209 aa9.75□□□□□ -0.85
CTPS2-201ENST00000359276 WWC2-AS2Q96NR7 200 aa9.75□□□□□ -0.85
CTPS2-201ENST00000359276 CSAG1Q6PB30 78 aa9.75□□□□□ -0.85
CTPS2-201ENST00000359276 ASB16-AS1Q495Z4 193 aa9.74□□□□□ -0.85
CTPS2-201ENST00000359276 DNAH10Q8IVF4 4471 aa9.72□□□□□ -0.85
CTPS2-201ENST00000359276 NBDYA0A0U1RRE5 68 aa9.71□□□□□ -0.85
CTPS2-201ENST00000359276 TGP01266 2768 aa9.71□□□□□ -0.85
CTPS2-201ENST00000359276 KRTAP13-1Q8IUC0 172 aa9.7□□□□□ -0.86
CTPS2-201ENST00000359276 ZNF861PO60384 105 aa9.69□□□□□ -0.86
CTPS2-201ENST00000359276 ANK2Q01484 3957 aa9.69□□□□□ -0.86
CTPS2-201ENST00000359276 PLA2G1BP04054 148 aaKnown RBP9.68□□□□□ -0.86
CTPS2-201ENST00000359276 FAM229AH3BQW9 127 aa9.68□□□□□ -0.86
CTPS2-201ENST00000359276 DMAC1Q96GE9 116 aa9.65□□□□□ -0.86
CTPS2-201ENST00000359276 APLNQ9ULZ1 77 aa9.65□□□□□ -0.86
CTPS2-201ENST00000359276 SPACA4Q8TDM5 124 aa9.64□□□□□ -0.87
CTPS2-201ENST00000359276 DMBT1Q9UGM3 2413 aaPredicted RBP9.64□□□□□ -0.87
CTPS2-201ENST00000359276 IGLV5-52A0A0A0MRZ9 124 aa9.63□□□□□ -0.87
CTPS2-201ENST00000359276 SPATA8Q6RVD6 105 aa9.63□□□□□ -0.87
CTPS2-201ENST00000359276 LINC00483Q53H64 154 aa9.61□□□□□ -0.87
CTPS2-201ENST00000359276 Q8N1X5 172 aa9.59□□□□□ -0.87
CTPS2-201ENST00000359276 A0A087WTM6 91 aa9.57□□□□□ -0.88
CTPS2-201ENST00000359276 FBN3Q75N90 2809 aa9.56□□□□□ -0.88
CTPS2-201ENST00000359276 LYSTQ99698 3801 aa9.54□□□□□ -0.88
CTPS2-201ENST00000359276 IGLV7-43P04211 117 aa9.51□□□□□ -0.89
CTPS2-201ENST00000359276 CRIPTQ9P021 101 aa9.49□□□□□ -0.89
CTPS2-201ENST00000359276 KRTAP13-3Q3SY46 172 aa9.49□□□□□ -0.89
CTPS2-201ENST00000359276 C1orf134Q5TEV5 83 aa9.49□□□□□ -0.89
CTPS2-201ENST00000359276 SSBP3-AS1Q7Z2R9 100 aa9.46□□□□□ -0.89
CTPS2-201ENST00000359276 NUPR2A6NF83 97 aa9.44□□□□□ -0.9
CTPS2-201ENST00000359276 Q6ZRN7 208 aaPredicted RBP9.44□□□□□ -0.9
CTPS2-201ENST00000359276 MEGF8Q7Z7M0 2845 aa9.38□□□□□ -0.91
CTPS2-201ENST00000359276 DNAH9Q9NYC9 4486 aa9.37□□□□□ -0.91
CTPS2-201ENST00000359276 HUWE1Q7Z6Z7 4374 aaKnown RBP9.36□□□□□ -0.91
CTPS2-201ENST00000359276 LY6G6CO95867 125 aa9.36□□□□□ -0.91
CTPS2-201ENST00000359276 K7ERS5 55 aa9.31□□□□□ -0.92
CTPS2-201ENST00000359276 DNAH1Q9P2D7 4330 aa9.29□□□□□ -0.92
CTPS2-201ENST00000359276 A0A1B0GU33 70 aa9.28□□□□□ -0.92
CTPS2-201ENST00000359276 KRTAP13-2Q52LG2 175 aa9.25□□□□□ -0.93
CTPS2-201ENST00000359276 TYMSOSQ8TAI1 123 aa9.24□□□□□ -0.93
CTPS2-201ENST00000359276 C9orf92A6NGG3 77 aa9.24□□□□□ -0.93
CTPS2-201ENST00000359276 FRAS1Q86XX4 4008 aa9.23□□□□□ -0.93
CTPS2-201ENST00000359276 Q6ZSA8 131 aa9.23□□□□□ -0.93
CTPS2-201ENST00000359276 KRTAP25-1Q3LHN0 102 aa9.22□□□□□ -0.93
CTPS2-201ENST00000359276 LINC00304Q8N9R0 145 aa9.2□□□□□ -0.94
CTPS2-201ENST00000359276 H0YAA0 97 aa9.2□□□□□ -0.94
CTPS2-201ENST00000359276 KRTAP16-1A8MUX0 517 aa9.18□□□□□ -0.94
CTPS2-201ENST00000359276 ROMO1P60602 79 aa9.17□□□□□ -0.94
CTPS2-201ENST00000359276 DNAH7Q8WXX0 4024 aa9.16□□□□□ -0.94
CTPS2-201ENST00000359276 DNAH8Q96JB1 4490 aa9.15□□□□□ -0.94
CTPS2-201ENST00000359276 KRTAP10-2P60368 255 aa9.15□□□□□ -0.94
CTPS2-201ENST00000359276 SPINT4Q6UDR6 99 aa9.14□□□□□ -0.95
CTPS2-201ENST00000359276 A8MUU9 505 aa9.14□□□□□ -0.95
CTPS2-201ENST00000359276 PLECQ15149 4684 aaKnown RBP9.13□□□□□ -0.95
CTPS2-201ENST00000359276 ALMS1Q8TCU4 4167 aa9.12□□□□□ -0.95
CTPS2-201ENST00000359276 A0A0D9SG42 100 aa9.12□□□□□ -0.95
CTPS2-201ENST00000359276 CMYA5Q8N3K9 4069 aa9.1□□□□□ -0.95
CTPS2-201ENST00000359276 H1FX-AS1Q4G0G2 97 aa9.09□□□□□ -0.95
CTPS2-201ENST00000359276 KRTAP10-1P60331 282 aa9.01□□□□□ -0.97
CTPS2-201ENST00000359276 DNAH17Q9UFH2 4485 aa8.99□□□□□ -0.97
CTPS2-201ENST00000359276 SMR3BP02814 79 aaPredicted RBP8.96□□□□□ -0.98
CTPS2-201ENST00000359276 KRTAP1-4P0C5Y4 121 aa8.94□□□□□ -0.98
CTPS2-201ENST00000359276 DNAH3Q8TD57 4116 aa8.93□□□□□ -0.98
CTPS2-201ENST00000359276 COX6B2Q6YFQ2 88 aa8.93□□□□□ -0.98
CTPS2-201ENST00000359276 KMT2AQ03164 3969 aa8.9□□□□□ -0.98
CTPS2-201ENST00000359276 DNAH11Q96DT5 4516 aa8.87□□□□□ -0.99
CTPS2-201ENST00000359276 HECTD4Q9Y4D8 3996 aa8.85□□□□□ -0.99
CTPS2-201ENST00000359276 STARD9Q9P2P6 4700 aa8.85□□□□□ -0.99
CTPS2-201ENST00000359276 P0C880 135 aa8.84□□□□□ -0.99
CTPS2-201ENST00000359276 RPL37P61927 97 aaKnown RBP8.84□□□□□ -0.99
CTPS2-201ENST00000359276 KRTAP3-1Q9BYR8 98 aa8.84□□□□□ -0.99
CTPS2-201ENST00000359276 C10orf95Q9H7T3 257 aa8.84□□□□□ -0.99
CTPS2-201ENST00000359276 NDUFAF8A1L188 74 aa8.8□□□□□ -1
CTPS2-201ENST00000359276 DNAH2Q9P225 4427 aa8.78□□□□□ -1
CTPS2-201ENST00000359276 DNAH6Q9C0G6 4158 aa8.77□□□□□ -1.01
CTPS2-201ENST00000359276 LRP1BQ9NZR2 4599 aa8.76□□□□□ -1.01
CTPS2-201ENST00000359276 VPS13DQ5THJ4 4388 aa8.74□□□□□ -1.01
CTPS2-201ENST00000359276 TPRXLQ17RH7 258 aa8.67□□□□□ -1.02
CTPS2-201ENST00000359276 C20orf166-AS1Q96NR2 134 aa8.67□□□□□ -1.02
CTPS2-201ENST00000359276 KRTAP13-4Q3LI77 160 aa8.6□□□□□ -1.03
CTPS2-201ENST00000359276 PRKDCP78527 4128 aaKnown RBP8.6□□□□□ -1.03
CTPS2-201ENST00000359276 VPS13BQ7Z7G8 4022 aa8.56□□□□□ -1.04
CTPS2-201ENST00000359276 S4R3F8 94 aa8.55□□□□□ -1.04
CTPS2-201ENST00000359276 DYNC2H1Q8NCM8 4307 aaKnown RBP8.55□□□□□ -1.04
CTPS2-201ENST00000359276 RPS29P62273 56 aaKnown RBP8.52□□□□□ -1.05
CTPS2-201ENST00000359276 DNAH5Q8TE73 4624 aa8.51□□□□□ -1.05
CTPS2-201ENST00000359276 KRTAP10-6P60371 365 aaPredicted RBP8.5□□□□□ -1.05
CTPS2-201ENST00000359276 KRTAP12-2P59991 146 aa8.43□□□□□ -1.06
CTPS2-201ENST00000359276 FAT1Q14517 4588 aa8.37□□□□□ -1.07
CTPS2-201ENST00000359276 KRTAP3-3Q9BYR6 98 aa8.36□□□□□ -1.07
CTPS2-201ENST00000359276 KRTAP15-1Q3LI76 137 aa8.35□□□□□ -1.07
CTPS2-201ENST00000359276 KRTAP3-2Q9BYR7 98 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms