RNA–Protein interactions for RNA: ENST00000357980.8

TPM1-205, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 1,800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-205ENST00000357980 A0A1B0GVX0 72 aa9.66□□□□□ -0.86
TPM1-205ENST00000357980 HCG22E2RYF7 251 aa9.63□□□□□ -0.87
TPM1-205ENST00000357980 OXTP01178 125 aa9.63□□□□□ -0.87
TPM1-205ENST00000357980 IGHV6-1A0A0B4J1U7 121 aa9.62□□□□□ -0.87
TPM1-205ENST00000357980 MMP24-AS1A0A0U1RRL7 71 aa9.61□□□□□ -0.87
TPM1-205ENST00000357980 KRTAP29-1A8MX34 341 aaPredicted RBP9.6□□□□□ -0.87
TPM1-205ENST00000357980 ATOX1O00244 68 aa9.6□□□□□ -0.87
TPM1-205ENST00000357980 C8orf17Q9NRJ1 99 aa9.59□□□□□ -0.87
TPM1-205ENST00000357980 NOTCH2NLQ7Z3S9 236 aa9.59□□□□□ -0.88
TPM1-205ENST00000357980 DMBT1Q9UGM3 2413 aaPredicted RBP9.58□□□□□ -0.88
TPM1-205ENST00000357980 WFDC13Q8IUB5 93 aa9.58□□□□□ -0.88
TPM1-205ENST00000357980 ABCA13Q86UQ4 5058 aa9.57□□□□□ -0.88
TPM1-205ENST00000357980 CASC2Q6XLA1 102 aa9.56□□□□□ -0.88
TPM1-205ENST00000357980 ANAPC13Q9BS18 74 aa9.55□□□□□ -0.88
TPM1-205ENST00000357980 hDV103S1A0JD37 113 aa9.54□□□□□ -0.88
TPM1-205ENST00000357980 RETNLBQ9BQ08 111 aa9.54□□□□□ -0.88
TPM1-205ENST00000357980 C8orf87E5RJ46 101 aa9.54□□□□□ -0.88
TPM1-205ENST00000357980 PCP4P48539 62 aa9.53□□□□□ -0.88
TPM1-205ENST00000357980 OCR1Q9BZK8 76 aa9.51□□□□□ -0.89
TPM1-205ENST00000357980 LINC00313P59037 77 aa9.49□□□□□ -0.89
TPM1-205ENST00000357980 SMIM20Q8N5G0 67 aa9.49□□□□□ -0.89
TPM1-205ENST00000357980 TMEM254Q8TBM7 123 aa9.49□□□□□ -0.89
TPM1-205ENST00000357980 SERP2Q8N6R1 65 aa9.48□□□□□ -0.89
TPM1-205ENST00000357980 TRAV7A0A075B6U4 112 aa9.47□□□□□ -0.89
TPM1-205ENST00000357980 MRPL34Q9BQ48 92 aaKnown RBP9.47□□□□□ -0.89
TPM1-205ENST00000357980 KRTAP16-1A8MUX0 517 aa9.45□□□□□ -0.9
TPM1-205ENST00000357980 FP248Q71RG6 208 aaPredicted RBP9.44□□□□□ -0.9
TPM1-205ENST00000357980 COX7CP15954 63 aa9.42□□□□□ -0.9
TPM1-205ENST00000357980 UQCRQO14949 82 aa9.39□□□□□ -0.91
TPM1-205ENST00000357980 Q8N9P0 234 aaPredicted RBP9.39□□□□□ -0.91
TPM1-205ENST00000357980 J3QL48 77 aa9.38□□□□□ -0.91
TPM1-205ENST00000357980 SVIPQ8NHG7 77 aa9.38□□□□□ -0.91
TPM1-205ENST00000357980 C9orf92A6NGG3 77 aa9.37□□□□□ -0.91
TPM1-205ENST00000357980 CCDC179H3BU77 68 aa9.37□□□□□ -0.91
TPM1-205ENST00000357980 NDUFS5O43920 106 aa9.37□□□□□ -0.91
TPM1-205ENST00000357980 TP53AIP1Q9HCN2 124 aa9.36□□□□□ -0.91
TPM1-205ENST00000357980 IGLV7-46A0A075B6I9 117 aa9.35□□□□□ -0.91
TPM1-205ENST00000357980 C5orf47Q569G3 176 aa9.31□□□□□ -0.92
TPM1-205ENST00000357980 KRTAP13-3Q3SY46 172 aa9.3□□□□□ -0.92
TPM1-205ENST00000357980 C20orf197Q8N268 126 aa9.3□□□□□ -0.92
TPM1-205ENST00000357980 PCLOQ9Y6V0 5065 aa9.29□□□□□ -0.92
TPM1-205ENST00000357980 TRAV22A0A0B4J277 110 aa9.29□□□□□ -0.92
TPM1-205ENST00000357980 PRR4Q16378 134 aa9.29□□□□□ -0.92
TPM1-205ENST00000357980 C20orf166-AS1Q96NR2 134 aa9.29□□□□□ -0.92
TPM1-205ENST00000357980 A8MUU9 505 aa9.27□□□□□ -0.93
TPM1-205ENST00000357980 Q5W150 140 aa9.27□□□□□ -0.93
TPM1-205ENST00000357980 H0Y9P7 68 aa9.26□□□□□ -0.93
TPM1-205ENST00000357980 A0A0U1RQV1 116 aa9.26□□□□□ -0.93
TPM1-205ENST00000357980 KLKP1Q107X0 134 aa9.26□□□□□ -0.93
TPM1-205ENST00000357980 CYSTM1Q9H1C7 97 aa9.24□□□□□ -0.93
TPM1-205ENST00000357980 SNURFQ9Y675 71 aa9.24□□□□□ -0.93
TPM1-205ENST00000357980 MP68P56378 58 aa9.24□□□□□ -0.93
TPM1-205ENST00000357980 TPRXLQ17RH7 258 aa9.22□□□□□ -0.93
TPM1-205ENST00000357980 Q75L30 129 aa9.21□□□□□ -0.93
TPM1-205ENST00000357980 ZCCHC13Q8WW36 166 aaKnown RBP9.21□□□□□ -0.93
TPM1-205ENST00000357980 H3BPC8 53 aa9.2□□□□□ -0.94
TPM1-205ENST00000357980 XP32Q5T750 250 aa9.2□□□□□ -0.94
TPM1-205ENST00000357980 LINC00208Q96KT6 92 aa9.2□□□□□ -0.94
TPM1-205ENST00000357980 C1orf64Q8NEQ6 169 aa9.18□□□□□ -0.94
TPM1-205ENST00000357980 H7BZZ5 65 aa9.13□□□□□ -0.95
TPM1-205ENST00000357980 RPL37P61927 97 aaKnown RBP9.13□□□□□ -0.95
TPM1-205ENST00000357980 LPAP08519 4548 aa9.12□□□□□ -0.95
TPM1-205ENST00000357980 LOC101927531A0A1B0GV80 90 aa9.11□□□□□ -0.95
TPM1-205ENST00000357980 NDUFC1O43677 76 aa9.1□□□□□ -0.95
TPM1-205ENST00000357980 IGKV2-30P06310 120 aa9.08□□□□□ -0.96
TPM1-205ENST00000357980 CYP4F30PQ9H0H9 118 aa9.08□□□□□ -0.96
TPM1-205ENST00000357980 HERC1Q15751 4861 aa9.06□□□□□ -0.96
TPM1-205ENST00000357980 LRP2P98164 4655 aa9.06□□□□□ -0.96
TPM1-205ENST00000357980 ATP11AUNQ6ZP68 121 aa9.05□□□□□ -0.96
TPM1-205ENST00000357980 IGKV2D-30A0A075B6S6 120 aa9.03□□□□□ -0.96
TPM1-205ENST00000357980 TMEM258P61165 79 aa9.01□□□□□ -0.97
TPM1-205ENST00000357980 PCOTHQ58A44 107 aa9.01□□□□□ -0.97
TPM1-205ENST00000357980 C7orf65Q6ZTY9 151 aa9□□□□□ -0.97
TPM1-205ENST00000357980 SPINK7P58062 85 aa8.95□□□□□ -0.98
TPM1-205ENST00000357980 SPANXA2-OT1Q8N9U9 137 aa8.94□□□□□ -0.98
TPM1-205ENST00000357980 HMCN2Q8NDA2 5059 aa8.93□□□□□ -0.98
TPM1-205ENST00000357980 FAM236DA0A1B0GTK5 79 aa8.93□□□□□ -0.98
TPM1-205ENST00000357980 FAM236CP0DP71 79 aa8.93□□□□□ -0.98
TPM1-205ENST00000357980 HRES1P13985 223 aa8.91□□□□□ -0.98
TPM1-205ENST00000357980 ATP5EP56381 51 aaPredicted RBP8.89□□□□□ -0.99
TPM1-205ENST00000357980 SEC61BP60468 96 aaKnown RBP8.87□□□□□ -0.99
TPM1-205ENST00000357980 C4orf26Q17RF5 130 aa8.81□□□□□ -1
TPM1-205ENST00000357980 DMAC1Q96GE9 116 aa8.79□□□□□ -1
TPM1-205ENST00000357980 MUC17Q685J3 4493 aa8.78□□□□□ -1
TPM1-205ENST00000357980 KRTAP4-1Q9BYQ7 146 aa8.74□□□□□ -1.01
TPM1-205ENST00000357980 SERP1Q9Y6X1 66 aa8.73□□□□□ -1.01
TPM1-205ENST00000357980 KRTAP3-1Q9BYR8 98 aa8.72□□□□□ -1.01
TPM1-205ENST00000357980 COX6B2Q6YFQ2 88 aa8.71□□□□□ -1.01
TPM1-205ENST00000357980 MPLKIPQ8TAP9 179 aa8.7□□□□□ -1.02
TPM1-205ENST00000357980 A8MUN3 132 aa8.7□□□□□ -1.02
TPM1-205ENST00000357980 ACYP2P14621 99 aa8.68□□□□□ -1.02
TPM1-205ENST00000357980 RPS28P62857 69 aaKnown RBP8.68□□□□□ -1.02
TPM1-205ENST00000357980 COA5Q86WW8 74 aa8.66□□□□□ -1.02
TPM1-205ENST00000357980 RBM12B-AS1Q9P1G2 102 aa8.6□□□□□ -1.03
TPM1-205ENST00000357980 MUC2Q02817 5179 aa8.57□□□□□ -1.04
TPM1-205ENST00000357980 UBR4Q5T4S7 5183 aa8.53□□□□□ -1.04
TPM1-205ENST00000357980 CHKB-CPT1BH3BT56 60 aa8.52□□□□□ -1.04
TPM1-205ENST00000357980 KRTAP19-2Q3LHN2 52 aa8.52□□□□□ -1.04
TPM1-205ENST00000357980 H1FX-AS1Q4G0G2 97 aa8.52□□□□□ -1.05
TPM1-205ENST00000357980 SMIM26A0A096LP01 95 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 116 ms