RNA–Protein interactions for RNA: ENST00000357613.8

TMEM170A-201, Transcript of transmembrane protein 170A, humanhuman

TSL 1 (best) BASIC

Gene TMEM170A, Length 4,959 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM170A-201ENST00000357613 LINC00472Q9H8W2 130 aa7.37□□□□□ -1.23
TMEM170A-201ENST00000357613 M0R2T5 61 aa7.36□□□□□ -1.23
TMEM170A-201ENST00000357613 VWFP04275 2813 aa7.35□□□□□ -1.23
TMEM170A-201ENST00000357613 Q5VSD8 79 aa7.34□□□□□ -1.23
TMEM170A-201ENST00000357613 SPRR1BP22528 89 aa7.32□□□□□ -1.24
TMEM170A-201ENST00000357613 ZCCHC13Q8WW36 166 aaKnown RBP7.32□□□□□ -1.24
TMEM170A-201ENST00000357613 TENM2Q9NT68 2774 aa7.32□□□□□ -1.24
TMEM170A-201ENST00000357613 LCE6AA0A183 80 aa7.31□□□□□ -1.24
TMEM170A-201ENST00000357613 SRRM2Q9UQ35 2752 aaKnown RBP7.31□□□□□ -1.24
TMEM170A-201ENST00000357613 SPINK7P58062 85 aa7.3□□□□□ -1.24
TMEM170A-201ENST00000357613 Q5W150 140 aa7.3□□□□□ -1.24
TMEM170A-201ENST00000357613 A0A087X002 238 aa7.27□□□□□ -1.25
TMEM170A-201ENST00000357613 A0A1B0GU33 70 aa7.27□□□□□ -1.25
TMEM170A-201ENST00000357613 CDC42SE1Q9NRR8 79 aa7.27□□□□□ -1.25
TMEM170A-201ENST00000357613 KRTAP11-1Q8IUC1 163 aa7.26□□□□□ -1.25
TMEM170A-201ENST00000357613 Q6ZR54 194 aa7.25□□□□□ -1.25
TMEM170A-201ENST00000357613 CAMK2N1Q7Z7J9 78 aa7.25□□□□□ -1.25
TMEM170A-201ENST00000357613 KRTAP4-16G5E9R7 235 aaPredicted RBP7.25□□□□□ -1.25
TMEM170A-201ENST00000357613 ANK3Q12955 4377 aaKnown RBP7.25□□□□□ -1.25
TMEM170A-201ENST00000357613 FBN1P35555 2871 aaKnown RBP7.25□□□□□ -1.25
TMEM170A-201ENST00000357613 CUBNO60494 3623 aa7.24□□□□□ -1.25
TMEM170A-201ENST00000357613 Q1T7F1 81 aa7.21□□□□□ -1.25
TMEM170A-201ENST00000357613 KTN1-AS1Q86SY8 53 aa7.21□□□□□ -1.26
TMEM170A-201ENST00000357613 FP248Q71RG6 208 aaPredicted RBP7.2□□□□□ -1.26
TMEM170A-201ENST00000357613 CSAG1Q6PB30 78 aa7.2□□□□□ -1.26
TMEM170A-201ENST00000357613 VPS13CQ709C8 3753 aa7.19□□□□□ -1.26
TMEM170A-201ENST00000357613 NOTCH2NLQ7Z3S9 236 aa7.19□□□□□ -1.26
TMEM170A-201ENST00000357613 S4R3F8 94 aa7.15□□□□□ -1.26
TMEM170A-201ENST00000357613 KRTAP7-1Q8IUC3 87 aa7.15□□□□□ -1.26
TMEM170A-201ENST00000357613 ZNF469Q96JG9 3925 aaPredicted RBP7.14□□□□□ -1.27
TMEM170A-201ENST00000357613 LINC00483Q53H64 154 aa7.13□□□□□ -1.27
TMEM170A-201ENST00000357613 Q6ZRN7 208 aaPredicted RBP7.13□□□□□ -1.27
TMEM170A-201ENST00000357613 LCA10Q71F78 164 aa7.13□□□□□ -1.27
TMEM170A-201ENST00000357613 Q5XG85 94 aa7.13□□□□□ -1.27
TMEM170A-201ENST00000357613 TGP01266 2768 aa7.13□□□□□ -1.27
TMEM170A-201ENST00000357613 PRAC1Q96KF2 57 aa7.12□□□□□ -1.27
TMEM170A-201ENST00000357613 LINC01558Q9Y6Z2 57 aa7.12□□□□□ -1.27
TMEM170A-201ENST00000357613 R4GN34 69 aa7.11□□□□□ -1.27
TMEM170A-201ENST00000357613 Q75L30 129 aa7.11□□□□□ -1.27
TMEM170A-201ENST00000357613 OXTP01178 125 aa7.1□□□□□ -1.27
TMEM170A-201ENST00000357613 Q5VV11 94 aa7.09□□□□□ -1.27
TMEM170A-201ENST00000357613 AKAP9Q99996 3911 aa7.09□□□□□ -1.27
TMEM170A-201ENST00000357613 SEC61BP60468 96 aaKnown RBP7.09□□□□□ -1.27
TMEM170A-201ENST00000357613 KRTAP29-1A8MX34 341 aaPredicted RBP7.07□□□□□ -1.28
TMEM170A-201ENST00000357613 DMAC1Q96GE9 116 aa7.02□□□□□ -1.29
TMEM170A-201ENST00000357613 TRRAPQ9Y4A5 3859 aa7□□□□□ -1.29
TMEM170A-201ENST00000357613 KRTAP13-2Q52LG2 175 aa7□□□□□ -1.29
TMEM170A-201ENST00000357613 SPATA8Q6RVD6 105 aa7□□□□□ -1.29
TMEM170A-201ENST00000357613 M0QZ58 72 aa6.99□□□□□ -1.29
TMEM170A-201ENST00000357613 LUZP6Q538Z0 58 aa6.96□□□□□ -1.3
TMEM170A-201ENST00000357613 RPL37P61927 97 aaKnown RBP6.92□□□□□ -1.3
TMEM170A-201ENST00000357613 ADM2Q7Z4H4 148 aa6.92□□□□□ -1.3
TMEM170A-201ENST00000357613 KRTAP13-1Q8IUC0 172 aa6.91□□□□□ -1.3
TMEM170A-201ENST00000357613 H1FX-AS1Q4G0G2 97 aa6.88□□□□□ -1.31
TMEM170A-201ENST00000357613 A8MU10 97 aa6.82□□□□□ -1.32
TMEM170A-201ENST00000357613 ASB16-AS1Q495Z4 193 aa6.81□□□□□ -1.32
TMEM170A-201ENST00000357613 ROMO1P60602 79 aa6.78□□□□□ -1.32
TMEM170A-201ENST00000357613 FBN3Q75N90 2809 aa6.75□□□□□ -1.33
TMEM170A-201ENST00000357613 RPS29P62273 56 aaKnown RBP6.74□□□□□ -1.33
TMEM170A-201ENST00000357613 A8MUU9 505 aa6.72□□□□□ -1.33
TMEM170A-201ENST00000357613 C20orf166-AS1Q96NR2 134 aa6.72□□□□□ -1.33
TMEM170A-201ENST00000357613 COL7A1Q02388 2944 aa6.72□□□□□ -1.33
TMEM170A-201ENST00000357613 PLAC4Q8WY50 150 aa6.71□□□□□ -1.33
TMEM170A-201ENST00000357613 KRTAP1-4P0C5Y4 121 aa6.67□□□□□ -1.34
TMEM170A-201ENST00000357613 MEGF8Q7Z7M0 2845 aa6.64□□□□□ -1.35
TMEM170A-201ENST00000357613 H3BS24 57 aa6.57□□□□□ -1.36
TMEM170A-201ENST00000357613 XP32Q5T750 250 aa6.56□□□□□ -1.36
TMEM170A-201ENST00000357613 HUWE1Q7Z6Z7 4374 aaKnown RBP6.55□□□□□ -1.36
TMEM170A-201ENST00000357613 A0A1B0GVY2 172 aa6.54□□□□□ -1.36
TMEM170A-201ENST00000357613 DNHD1Q96M86 4753 aa6.52□□□□□ -1.37
TMEM170A-201ENST00000357613 A6NN06 94 aa6.51□□□□□ -1.37
TMEM170A-201ENST00000357613 ANK2Q01484 3957 aa6.48□□□□□ -1.37
TMEM170A-201ENST00000357613 A0A0A0MQY5 61 aa6.48□□□□□ -1.37
TMEM170A-201ENST00000357613 DNAH9Q9NYC9 4486 aa6.47□□□□□ -1.37
TMEM170A-201ENST00000357613 KRTAP25-1Q3LHN0 102 aa6.46□□□□□ -1.38
TMEM170A-201ENST00000357613 KRTAP16-1A8MUX0 517 aa6.38□□□□□ -1.39
TMEM170A-201ENST00000357613 C10orf95Q9H7T3 257 aa6.38□□□□□ -1.39
TMEM170A-201ENST00000357613 KRTAP10-8P60410 259 aa6.37□□□□□ -1.39
TMEM170A-201ENST00000357613 TNP1P09430 55 aa6.36□□□□□ -1.39
TMEM170A-201ENST00000357613 PRKDCP78527 4128 aaKnown RBP6.34□□□□□ -1.4
TMEM170A-201ENST00000357613 TPRXLQ17RH7 258 aa6.34□□□□□ -1.4
TMEM170A-201ENST00000357613 KRTAP13-3Q3SY46 172 aa6.33□□□□□ -1.4
TMEM170A-201ENST00000357613 NDUFAF8A1L188 74 aa6.32□□□□□ -1.4
TMEM170A-201ENST00000357613 P0C880 135 aa6.31□□□□□ -1.4
TMEM170A-201ENST00000357613 H0YAA0 97 aa6.31□□□□□ -1.4
TMEM170A-201ENST00000357613 CMYA5Q8N3K9 4069 aa6.29□□□□□ -1.4
TMEM170A-201ENST00000357613 KRTAP10-10P60014 251 aa6.29□□□□□ -1.4
TMEM170A-201ENST00000357613 PLECQ15149 4684 aaKnown RBP6.25□□□□□ -1.41
TMEM170A-201ENST00000357613 DNAH3Q8TD57 4116 aa6.23□□□□□ -1.41
TMEM170A-201ENST00000357613 STARD9Q9P2P6 4700 aa6.19□□□□□ -1.42
TMEM170A-201ENST00000357613 ALMS1Q8TCU4 4167 aa6.19□□□□□ -1.42
TMEM170A-201ENST00000357613 CSMD3Q7Z407 3707 aa6.11□□□□□ -1.43
TMEM170A-201ENST00000357613 VPS13DQ5THJ4 4388 aa6.09□□□□□ -1.43
TMEM170A-201ENST00000357613 DNAH1Q9P2D7 4330 aa6.06□□□□□ -1.44
TMEM170A-201ENST00000357613 PP632Q6XCG6 107 aa6.02□□□□□ -1.45
TMEM170A-201ENST00000357613 DNAH10Q8IVF4 4471 aa6□□□□□ -1.45
TMEM170A-201ENST00000357613 KRTAP3-1Q9BYR8 98 aa5.98□□□□□ -1.45
TMEM170A-201ENST00000357613 KMT2AQ03164 3969 aa5.98□□□□□ -1.45
TMEM170A-201ENST00000357613 KRTAP12-2P59991 146 aa5.98□□□□□ -1.45
TMEM170A-201ENST00000357613 DNAH5Q8TE73 4624 aa5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms