RNA–Protein interactions for RNA: ENST00000356800.6

SMARCD3-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best) BASIC

Gene SMARCD3, Length 1,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-202ENST00000356800 C1orf195Q5TG92 126 aa10.32□□□□□ -0.76
SMARCD3-202ENST00000356800 NDUFB1O75438 58 aa10.31□□□□□ -0.76
SMARCD3-202ENST00000356800 ATOX1O00244 68 aa10.3□□□□□ -0.76
SMARCD3-202ENST00000356800 KRTAP29-1A8MX34 341 aaPredicted RBP10.29□□□□□ -0.76
SMARCD3-202ENST00000356800 PCP4P48539 62 aa10.29□□□□□ -0.76
SMARCD3-202ENST00000356800 DMBT1Q9UGM3 2413 aaPredicted RBP10.27□□□□□ -0.76
SMARCD3-202ENST00000356800 HCG22E2RYF7 251 aa10.27□□□□□ -0.77
SMARCD3-202ENST00000356800 A0A1B0GVX0 72 aa10.26□□□□□ -0.77
SMARCD3-202ENST00000356800 ANAPC13Q9BS18 74 aa10.26□□□□□ -0.77
SMARCD3-202ENST00000356800 IGHV6-1A0A0B4J1U7 121 aa10.21□□□□□ -0.78
SMARCD3-202ENST00000356800 MMP24-AS1A0A0U1RRL7 71 aa10.21□□□□□ -0.78
SMARCD3-202ENST00000356800 RETNLBQ9BQ08 111 aa10.21□□□□□ -0.78
SMARCD3-202ENST00000356800 SMIM20Q8N5G0 67 aa10.19□□□□□ -0.78
SMARCD3-202ENST00000356800 C8orf17Q9NRJ1 99 aa10.19□□□□□ -0.78
SMARCD3-202ENST00000356800 CASC2Q6XLA1 102 aa10.18□□□□□ -0.78
SMARCD3-202ENST00000356800 WFDC13Q8IUB5 93 aa10.18□□□□□ -0.78
SMARCD3-202ENST00000356800 SERP2Q8N6R1 65 aa10.16□□□□□ -0.78
SMARCD3-202ENST00000356800 PCLOQ9Y6V0 5065 aa10.16□□□□□ -0.78
SMARCD3-202ENST00000356800 hDV103S1A0JD37 113 aa10.15□□□□□ -0.78
SMARCD3-202ENST00000356800 C8orf87E5RJ46 101 aa10.15□□□□□ -0.79
SMARCD3-202ENST00000356800 NOTCH2NLQ7Z3S9 236 aa10.15□□□□□ -0.79
SMARCD3-202ENST00000356800 TRAV7A0A075B6U4 112 aa10.14□□□□□ -0.79
SMARCD3-202ENST00000356800 OCR1Q9BZK8 76 aa10.14□□□□□ -0.79
SMARCD3-202ENST00000356800 J3QL48 77 aa10.12□□□□□ -0.79
SMARCD3-202ENST00000356800 COX7CP15954 63 aa10.12□□□□□ -0.79
SMARCD3-202ENST00000356800 LINC00313P59037 77 aa10.09□□□□□ -0.79
SMARCD3-202ENST00000356800 TMEM254Q8TBM7 123 aa10.09□□□□□ -0.79
SMARCD3-202ENST00000356800 UQCRQO14949 82 aa10.09□□□□□ -0.79
SMARCD3-202ENST00000356800 MRPL34Q9BQ48 92 aaKnown RBP10.07□□□□□ -0.8
SMARCD3-202ENST00000356800 FP248Q71RG6 208 aaPredicted RBP10.04□□□□□ -0.8
SMARCD3-202ENST00000356800 CCDC179H3BU77 68 aa10.03□□□□□ -0.8
SMARCD3-202ENST00000356800 TP53AIP1Q9HCN2 124 aa10.01□□□□□ -0.81
SMARCD3-202ENST00000356800 KRTAP16-1A8MUX0 517 aa10□□□□□ -0.81
SMARCD3-202ENST00000356800 IGLV7-46A0A075B6I9 117 aa9.99□□□□□ -0.81
SMARCD3-202ENST00000356800 C9orf92A6NGG3 77 aa9.98□□□□□ -0.81
SMARCD3-202ENST00000356800 Q8N9P0 234 aaPredicted RBP9.98□□□□□ -0.81
SMARCD3-202ENST00000356800 C5orf47Q569G3 176 aa9.97□□□□□ -0.81
SMARCD3-202ENST00000356800 NDUFS5O43920 106 aa9.96□□□□□ -0.81
SMARCD3-202ENST00000356800 PRR4Q16378 134 aa9.96□□□□□ -0.81
SMARCD3-202ENST00000356800 C20orf197Q8N268 126 aa9.94□□□□□ -0.82
SMARCD3-202ENST00000356800 KRTAP13-3Q3SY46 172 aa9.92□□□□□ -0.82
SMARCD3-202ENST00000356800 KLKP1Q107X0 134 aa9.91□□□□□ -0.82
SMARCD3-202ENST00000356800 TRAV22A0A0B4J277 110 aa9.9□□□□□ -0.83
SMARCD3-202ENST00000356800 A0A0U1RQV1 116 aa9.9□□□□□ -0.83
SMARCD3-202ENST00000356800 MP68P56378 58 aa9.89□□□□□ -0.83
SMARCD3-202ENST00000356800 H0Y9P7 68 aa9.87□□□□□ -0.83
SMARCD3-202ENST00000356800 H3BPC8 53 aa9.87□□□□□ -0.83
SMARCD3-202ENST00000356800 SNURFQ9Y675 71 aa9.86□□□□□ -0.83
SMARCD3-202ENST00000356800 HERC1Q15751 4861 aa9.85□□□□□ -0.83
SMARCD3-202ENST00000356800 C20orf166-AS1Q96NR2 134 aa9.84□□□□□ -0.83
SMARCD3-202ENST00000356800 CYSTM1Q9H1C7 97 aa9.84□□□□□ -0.83
SMARCD3-202ENST00000356800 TPRXLQ17RH7 258 aa9.83□□□□□ -0.84
SMARCD3-202ENST00000356800 ZCCHC13Q8WW36 166 aaKnown RBP9.83□□□□□ -0.84
SMARCD3-202ENST00000356800 A8MUU9 505 aa9.83□□□□□ -0.84
SMARCD3-202ENST00000356800 Q5W150 140 aa9.82□□□□□ -0.84
SMARCD3-202ENST00000356800 LPAP08519 4548 aa9.81□□□□□ -0.84
SMARCD3-202ENST00000356800 XP32Q5T750 250 aa9.81□□□□□ -0.84
SMARCD3-202ENST00000356800 LINC00208Q96KT6 92 aa9.8□□□□□ -0.84
SMARCD3-202ENST00000356800 NDUFC1O43677 76 aa9.8□□□□□ -0.84
SMARCD3-202ENST00000356800 C1orf64Q8NEQ6 169 aa9.79□□□□□ -0.84
SMARCD3-202ENST00000356800 H7BZZ5 65 aa9.77□□□□□ -0.85
SMARCD3-202ENST00000356800 Q75L30 129 aa9.77□□□□□ -0.85
SMARCD3-202ENST00000356800 LOC101927531A0A1B0GV80 90 aa9.73□□□□□ -0.85
SMARCD3-202ENST00000356800 LRP2P98164 4655 aa9.72□□□□□ -0.85
SMARCD3-202ENST00000356800 HMCN2Q8NDA2 5059 aa9.71□□□□□ -0.85
SMARCD3-202ENST00000356800 RPL37P61927 97 aaKnown RBP9.71□□□□□ -0.85
SMARCD3-202ENST00000356800 TMEM258P61165 79 aa9.69□□□□□ -0.86
SMARCD3-202ENST00000356800 CYP4F30PQ9H0H9 118 aa9.66□□□□□ -0.86
SMARCD3-202ENST00000356800 IGKV2-30P06310 120 aa9.65□□□□□ -0.86
SMARCD3-202ENST00000356800 ATP11AUNQ6ZP68 121 aa9.61□□□□□ -0.87
SMARCD3-202ENST00000356800 FAM236DA0A1B0GTK5 79 aa9.58□□□□□ -0.88
SMARCD3-202ENST00000356800 FAM236CP0DP71 79 aa9.58□□□□□ -0.88
SMARCD3-202ENST00000356800 PCOTHQ58A44 107 aa9.58□□□□□ -0.88
SMARCD3-202ENST00000356800 IGKV2D-30A0A075B6S6 120 aa9.58□□□□□ -0.88
SMARCD3-202ENST00000356800 SPANXA2-OT1Q8N9U9 137 aa9.58□□□□□ -0.88
SMARCD3-202ENST00000356800 ATP5EP56381 51 aaPredicted RBP9.57□□□□□ -0.88
SMARCD3-202ENST00000356800 C7orf65Q6ZTY9 151 aa9.56□□□□□ -0.88
SMARCD3-202ENST00000356800 SPINK7P58062 85 aa9.49□□□□□ -0.89
SMARCD3-202ENST00000356800 MUC17Q685J3 4493 aa9.49□□□□□ -0.89
SMARCD3-202ENST00000356800 HRES1P13985 223 aa9.48□□□□□ -0.89
SMARCD3-202ENST00000356800 SEC61BP60468 96 aaKnown RBP9.48□□□□□ -0.89
SMARCD3-202ENST00000356800 RPS28P62857 69 aaKnown RBP9.39□□□□□ -0.91
SMARCD3-202ENST00000356800 KRTAP4-1Q9BYQ7 146 aa9.39□□□□□ -0.91
SMARCD3-202ENST00000356800 SERP1Q9Y6X1 66 aa9.39□□□□□ -0.91
SMARCD3-202ENST00000356800 DMAC1Q96GE9 116 aa9.36□□□□□ -0.91
SMARCD3-202ENST00000356800 C4orf26Q17RF5 130 aa9.33□□□□□ -0.92
SMARCD3-202ENST00000356800 ACYP2P14621 99 aa9.29□□□□□ -0.92
SMARCD3-202ENST00000356800 A8MUN3 132 aa9.29□□□□□ -0.92
SMARCD3-202ENST00000356800 UBR4Q5T4S7 5183 aa9.28□□□□□ -0.92
SMARCD3-202ENST00000356800 COX6B2Q6YFQ2 88 aa9.25□□□□□ -0.93
SMARCD3-202ENST00000356800 COA5Q86WW8 74 aa9.25□□□□□ -0.93
SMARCD3-202ENST00000356800 MPLKIPQ8TAP9 179 aa9.25□□□□□ -0.93
SMARCD3-202ENST00000356800 KRTAP3-1Q9BYR8 98 aa9.23□□□□□ -0.93
SMARCD3-202ENST00000356800 RNF213Q63HN8 5207 aa9.22□□□□□ -0.93
SMARCD3-202ENST00000356800 MUC2Q02817 5179 aa9.22□□□□□ -0.93
SMARCD3-202ENST00000356800 SMIM26A0A096LP01 95 aa9.13□□□□□ -0.95
SMARCD3-202ENST00000356800 RBM12B-AS1Q9P1G2 102 aa9.13□□□□□ -0.95
SMARCD3-202ENST00000356800 CHKB-CPT1BH3BT56 60 aa9.12□□□□□ -0.95
SMARCD3-202ENST00000356800 KRTAP19-2Q3LHN2 52 aa9.11□□□□□ -0.95
SMARCD3-202ENST00000356800 SVIPQ8NHG7 77 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms