RNA–Protein interactions for RNA: ENST00000355815.8

SREBF1-202, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SREBF1, Length 4,253 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-202ENST00000355815 PSORS1C2Q9UIG4 136 aa8.68□□□□□ -1.02
SREBF1-202ENST00000355815 PANO1I0J062 215 aa8.68□□□□□ -1.02
SREBF1-202ENST00000355815 CSAG1Q6PB30 78 aa8.68□□□□□ -1.02
SREBF1-202ENST00000355815 A0A0D9SG42 100 aa8.67□□□□□ -1.02
SREBF1-202ENST00000355815 IGLV5-37A0A075B6J1 123 aa8.67□□□□□ -1.02
SREBF1-202ENST00000355815 SPRR1AP35321 89 aa8.67□□□□□ -1.02
SREBF1-202ENST00000355815 KRTAP7-1Q8IUC3 87 aa8.67□□□□□ -1.02
SREBF1-202ENST00000355815 LINC01558Q9Y6Z2 57 aa8.67□□□□□ -1.02
SREBF1-202ENST00000355815 MMP24-AS1A0A0U1RRL7 71 aa8.66□□□□□ -1.02
SREBF1-202ENST00000355815 SRRM2Q9UQ35 2752 aaKnown RBP8.65□□□□□ -1.02
SREBF1-202ENST00000355815 TYMSOSQ8TAI1 123 aa8.65□□□□□ -1.02
SREBF1-202ENST00000355815 KRTAP11-1Q8IUC1 163 aa8.63□□□□□ -1.03
SREBF1-202ENST00000355815 ZNF861PO60384 105 aa8.63□□□□□ -1.03
SREBF1-202ENST00000355815 C9orf92A6NGG3 77 aa8.61□□□□□ -1.03
SREBF1-202ENST00000355815 ANK3Q12955 4377 aaKnown RBP8.61□□□□□ -1.03
SREBF1-202ENST00000355815 KRTAP4-16G5E9R7 235 aaPredicted RBP8.61□□□□□ -1.03
SREBF1-202ENST00000355815 PLA2G1BP04054 148 aaKnown RBP8.6□□□□□ -1.03
SREBF1-202ENST00000355815 TNP2Q05952 138 aa8.59□□□□□ -1.03
SREBF1-202ENST00000355815 LINC00472Q9H8W2 130 aa8.55□□□□□ -1.04
SREBF1-202ENST00000355815 SMR3BP02814 79 aaPredicted RBP8.54□□□□□ -1.04
SREBF1-202ENST00000355815 ADM2Q7Z4H4 148 aa8.54□□□□□ -1.04
SREBF1-202ENST00000355815 ZCCHC13Q8WW36 166 aaKnown RBP8.52□□□□□ -1.04
SREBF1-202ENST00000355815 A6NN06 94 aa8.51□□□□□ -1.05
SREBF1-202ENST00000355815 CSMD3Q7Z407 3707 aa8.5□□□□□ -1.05
SREBF1-202ENST00000355815 IGLV7-43P04211 117 aa8.48□□□□□ -1.05
SREBF1-202ENST00000355815 COL7A1Q02388 2944 aa8.47□□□□□ -1.05
SREBF1-202ENST00000355815 AKAP9Q99996 3911 aa8.46□□□□□ -1.05
SREBF1-202ENST00000355815 A0A1B0GU33 70 aa8.45□□□□□ -1.06
SREBF1-202ENST00000355815 KRTAP29-1A8MX34 341 aaPredicted RBP8.43□□□□□ -1.06
SREBF1-202ENST00000355815 Q5W150 140 aa8.41□□□□□ -1.06
SREBF1-202ENST00000355815 FBN3Q75N90 2809 aa8.4□□□□□ -1.06
SREBF1-202ENST00000355815 A0A087X002 238 aa8.39□□□□□ -1.07
SREBF1-202ENST00000355815 NOTCH2NLQ7Z3S9 236 aa8.39□□□□□ -1.07
SREBF1-202ENST00000355815 KRTAP10-2P60368 255 aa8.38□□□□□ -1.07
SREBF1-202ENST00000355815 LINC00304Q8N9R0 145 aa8.36□□□□□ -1.07
SREBF1-202ENST00000355815 SPRR1BP22528 89 aa8.35□□□□□ -1.07
SREBF1-202ENST00000355815 Q6ZRN7 208 aaPredicted RBP8.33□□□□□ -1.08
SREBF1-202ENST00000355815 PLAC8Q9NZF1 115 aa8.32□□□□□ -1.08
SREBF1-202ENST00000355815 LCE6AA0A183 80 aa8.27□□□□□ -1.09
SREBF1-202ENST00000355815 KRTAP10-1P60331 282 aa8.26□□□□□ -1.09
SREBF1-202ENST00000355815 J3QL48 77 aa8.26□□□□□ -1.09
SREBF1-202ENST00000355815 SPATA8Q6RVD6 105 aa8.24□□□□□ -1.09
SREBF1-202ENST00000355815 Q6ZR54 194 aa8.24□□□□□ -1.09
SREBF1-202ENST00000355815 DMAC1Q96GE9 116 aa8.24□□□□□ -1.09
SREBF1-202ENST00000355815 A0A0A0MQY5 61 aa8.21□□□□□ -1.1
SREBF1-202ENST00000355815 MEGF8Q7Z7M0 2845 aa8.18□□□□□ -1.1
SREBF1-202ENST00000355815 KRTAP13-1Q8IUC0 172 aa8.17□□□□□ -1.1
SREBF1-202ENST00000355815 LUZP6Q538Z0 58 aa8.14□□□□□ -1.11
SREBF1-202ENST00000355815 LINC00483Q53H64 154 aa8.14□□□□□ -1.11
SREBF1-202ENST00000355815 COX6B2Q6YFQ2 88 aa8.11□□□□□ -1.11
SREBF1-202ENST00000355815 RPL37P61927 97 aaKnown RBP8.06□□□□□ -1.12
SREBF1-202ENST00000355815 NDUFAF8A1L188 74 aa8.04□□□□□ -1.12
SREBF1-202ENST00000355815 ROMO1P60602 79 aa8.04□□□□□ -1.12
SREBF1-202ENST00000355815 H1FX-AS1Q4G0G2 97 aa8.04□□□□□ -1.12
SREBF1-202ENST00000355815 KRTAP13-2Q52LG2 175 aa8.03□□□□□ -1.12
SREBF1-202ENST00000355815 KRTAP25-1Q3LHN0 102 aa8.03□□□□□ -1.12
SREBF1-202ENST00000355815 KRTAP16-1A8MUX0 517 aa8.02□□□□□ -1.13
SREBF1-202ENST00000355815 ASB16-AS1Q495Z4 193 aa7.98□□□□□ -1.13
SREBF1-202ENST00000355815 CAMK2N1Q7Z7J9 78 aa7.95□□□□□ -1.14
SREBF1-202ENST00000355815 S4R3F8 94 aa7.88□□□□□ -1.15
SREBF1-202ENST00000355815 A8MUU9 505 aa7.88□□□□□ -1.15
SREBF1-202ENST00000355815 HUWE1Q7Z6Z7 4374 aaKnown RBP7.88□□□□□ -1.15
SREBF1-202ENST00000355815 Q6ZSA8 131 aa7.87□□□□□ -1.15
SREBF1-202ENST00000355815 KRTAP21-3Q3LHN1 58 aa7.86□□□□□ -1.15
SREBF1-202ENST00000355815 R4GN34 69 aa7.83□□□□□ -1.16
SREBF1-202ENST00000355815 DNAH10Q8IVF4 4471 aa7.83□□□□□ -1.16
SREBF1-202ENST00000355815 C10orf95Q9H7T3 257 aa7.79□□□□□ -1.16
SREBF1-202ENST00000355815 ANK2Q01484 3957 aa7.79□□□□□ -1.16
SREBF1-202ENST00000355815 KRTAP1-4P0C5Y4 121 aa7.78□□□□□ -1.16
SREBF1-202ENST00000355815 M0QZ58 72 aa7.75□□□□□ -1.17
SREBF1-202ENST00000355815 Q5VSD8 79 aa7.72□□□□□ -1.17
SREBF1-202ENST00000355815 H0YAA0 97 aa7.68□□□□□ -1.18
SREBF1-202ENST00000355815 C20orf166-AS1Q96NR2 134 aa7.68□□□□□ -1.18
SREBF1-202ENST00000355815 PLECQ15149 4684 aaKnown RBP7.67□□□□□ -1.18
SREBF1-202ENST00000355815 M0R2T5 61 aa7.64□□□□□ -1.19
SREBF1-202ENST00000355815 DNAH9Q9NYC9 4486 aa7.62□□□□□ -1.19
SREBF1-202ENST00000355815 LYSTQ99698 3801 aa7.62□□□□□ -1.19
SREBF1-202ENST00000355815 SEC61BP60468 96 aaKnown RBP7.62□□□□□ -1.19
SREBF1-202ENST00000355815 DNHD1Q96M86 4753 aa7.58□□□□□ -1.2
SREBF1-202ENST00000355815 KRTAP13-3Q3SY46 172 aa7.54□□□□□ -1.2
SREBF1-202ENST00000355815 DNAH11Q96DT5 4516 aa7.51□□□□□ -1.21
SREBF1-202ENST00000355815 RPS29P62273 56 aaKnown RBP7.5□□□□□ -1.21
SREBF1-202ENST00000355815 STARD9Q9P2P6 4700 aa7.49□□□□□ -1.21
SREBF1-202ENST00000355815 P0C880 135 aa7.48□□□□□ -1.21
SREBF1-202ENST00000355815 PRKDCP78527 4128 aaKnown RBP7.47□□□□□ -1.21
SREBF1-202ENST00000355815 DNAH1Q9P2D7 4330 aa7.46□□□□□ -1.22
SREBF1-202ENST00000355815 PLAC4Q8WY50 150 aa7.43□□□□□ -1.22
SREBF1-202ENST00000355815 KMT2AQ03164 3969 aa7.43□□□□□ -1.22
SREBF1-202ENST00000355815 DNAH7Q8WXX0 4024 aa7.36□□□□□ -1.23
SREBF1-202ENST00000355815 KRTAP10-8P60410 259 aa7.33□□□□□ -1.24
SREBF1-202ENST00000355815 DNAH8Q96JB1 4490 aa7.32□□□□□ -1.24
SREBF1-202ENST00000355815 LRP1BQ9NZR2 4599 aa7.29□□□□□ -1.24
SREBF1-202ENST00000355815 FAT1Q14517 4588 aa7.29□□□□□ -1.24
SREBF1-202ENST00000355815 A0A1B0GVY2 172 aa7.29□□□□□ -1.24
SREBF1-202ENST00000355815 CMYA5Q8N3K9 4069 aa7.28□□□□□ -1.24
SREBF1-202ENST00000355815 XP32Q5T750 250 aa7.28□□□□□ -1.24
SREBF1-202ENST00000355815 DNAH5Q8TE73 4624 aa7.26□□□□□ -1.25
SREBF1-202ENST00000355815 VPS13DQ5THJ4 4388 aa7.25□□□□□ -1.25
SREBF1-202ENST00000355815 FRAS1Q86XX4 4008 aa7.24□□□□□ -1.25
SREBF1-202ENST00000355815 KRTAP3-1Q9BYR8 98 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms