RNA–Protein interactions for RNA: ENST00000355560.4

CLK2-201, Transcript of CDC like kinase 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CLK2, Length 2,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK2-201ENST00000355560 C1orf195Q5TG92 126 aa14.74□□□□□ -0.05
CLK2-201ENST00000355560 SPINK1P00995 79 aa14.74□□□□□ -0.05
CLK2-201ENST00000355560 NOTCH2NLQ7Z3S9 236 aa14.73□□□□□ -0.05
CLK2-201ENST00000355560 FAM229AH3BQW9 127 aa14.72□□□□□ -0.05
CLK2-201ENST00000355560 LINC00304Q8N9R0 145 aa14.72□□□□□ -0.05
CLK2-201ENST00000355560 A0A0U1RQV1 116 aa14.71□□□□□ -0.05
CLK2-201ENST00000355560 C5orf47Q569G3 176 aa14.69□□□□□ -0.06
CLK2-201ENST00000355560 H7BZZ5 65 aa14.69□□□□□ -0.06
CLK2-201ENST00000355560 TMEM258P61165 79 aa14.69□□□□□ -0.06
CLK2-201ENST00000355560 HSPG2P98160 4391 aa14.67□□□□□ -0.06
CLK2-201ENST00000355560 Q5VSD8 79 aa14.64□□□□□ -0.07
CLK2-201ENST00000355560 MRPL34Q9BQ48 92 aaKnown RBP14.64□□□□□ -0.07
CLK2-201ENST00000355560 SPAG11AQ6PDA7 123 aa14.63□□□□□ -0.07
CLK2-201ENST00000355560 NDUFC1O43677 76 aa14.62□□□□□ -0.07
CLK2-201ENST00000355560 RPS29P62273 56 aaKnown RBP14.61□□□□□ -0.07
CLK2-201ENST00000355560 C8orf87E5RJ46 101 aa14.6□□□□□ -0.07
CLK2-201ENST00000355560 NDUFS5O43920 106 aa14.59□□□□□ -0.07
CLK2-201ENST00000355560 MP68P56378 58 aa14.59□□□□□ -0.07
CLK2-201ENST00000355560 RYR1P21817 5038 aa14.58□□□□□ -0.08
CLK2-201ENST00000355560 TP53AIP1Q9HCN2 124 aa14.57□□□□□ -0.08
CLK2-201ENST00000355560 H0Y9P7 68 aa14.56□□□□□ -0.08
CLK2-201ENST00000355560 ZCCHC13Q8WW36 166 aaKnown RBP14.56□□□□□ -0.08
CLK2-201ENST00000355560 LINC00313P59037 77 aa14.54□□□□□ -0.08
CLK2-201ENST00000355560 PKHD1L1Q86WI1 4243 aa14.54□□□□□ -0.08
CLK2-201ENST00000355560 TRAV22A0A0B4J277 110 aa14.54□□□□□ -0.08
CLK2-201ENST00000355560 LINC00208Q96KT6 92 aa14.52□□□□□ -0.09
CLK2-201ENST00000355560 FAM236DA0A1B0GTK5 79 aa14.51□□□□□ -0.09
CLK2-201ENST00000355560 FAM236CP0DP71 79 aa14.51□□□□□ -0.09
CLK2-201ENST00000355560 KIAA1109Q2LD37 5005 aa14.48□□□□□ -0.09
CLK2-201ENST00000355560 H3BPC8 53 aa14.47□□□□□ -0.09
CLK2-201ENST00000355560 EPPK1P58107 5090 aaKnown RBP14.46□□□□□ -0.09
CLK2-201ENST00000355560 KRTAP17-1Q9BYP8 105 aa14.46□□□□□ -0.09
CLK2-201ENST00000355560 C1orf64Q8NEQ6 169 aa14.42□□□□□ -0.1
CLK2-201ENST00000355560 KRTAP16-1A8MUX0 517 aa14.39□□□□□ -0.11
CLK2-201ENST00000355560 LRP1Q07954 4544 aaKnown RBP14.39□□□□□ -0.11
CLK2-201ENST00000355560 Q8N9P0 234 aaPredicted RBP14.38□□□□□ -0.11
CLK2-201ENST00000355560 ATP5EP56381 51 aaPredicted RBP14.35□□□□□ -0.11
CLK2-201ENST00000355560 Q8N1X5 172 aa14.35□□□□□ -0.11
CLK2-201ENST00000355560 KRTAP10-8P60410 259 aa14.33□□□□□ -0.12
CLK2-201ENST00000355560 Q5W150 140 aa14.33□□□□□ -0.12
CLK2-201ENST00000355560 FLG2Q5D862 2391 aaPredicted RBP14.31□□□□□ -0.12
CLK2-201ENST00000355560 RETNLBQ9BQ08 111 aa14.3□□□□□ -0.12
CLK2-201ENST00000355560 TNXBP22105 4242 aa14.3□□□□□ -0.12
CLK2-201ENST00000355560 RPS28P62857 69 aaKnown RBP14.28□□□□□ -0.12
CLK2-201ENST00000355560 KRTAP13-3Q3SY46 172 aa14.28□□□□□ -0.12
CLK2-201ENST00000355560 SERP1Q9Y6X1 66 aa14.22□□□□□ -0.13
CLK2-201ENST00000355560 FAT3Q8TDW7 4589 aa14.21□□□□□ -0.13
CLK2-201ENST00000355560 OXTP01178 125 aa14.2□□□□□ -0.14
CLK2-201ENST00000355560 PRR4Q16378 134 aa14.2□□□□□ -0.14
CLK2-201ENST00000355560 PCOTHQ58A44 107 aa14.2□□□□□ -0.14
CLK2-201ENST00000355560 LOC101927531A0A1B0GV80 90 aa14.19□□□□□ -0.14
CLK2-201ENST00000355560 C9orf92A6NGG3 77 aa14.17□□□□□ -0.14
CLK2-201ENST00000355560 SPANXA2-OT1Q8N9U9 137 aa14.15□□□□□ -0.14
CLK2-201ENST00000355560 MYCBP2O75592 4640 aa14.15□□□□□ -0.14
CLK2-201ENST00000355560 CYP4F30PQ9H0H9 118 aa14.11□□□□□ -0.15
CLK2-201ENST00000355560 DMBT1Q9UGM3 2413 aaPredicted RBP14.09□□□□□ -0.15
CLK2-201ENST00000355560 MT1HL1P0DM35 61 aa14.09□□□□□ -0.15
CLK2-201ENST00000355560 IGLV7-46A0A075B6I9 117 aa14.05□□□□□ -0.16
CLK2-201ENST00000355560 IGKV2-30P06310 120 aa14.03□□□□□ -0.16
CLK2-201ENST00000355560 C20orf166-AS1Q96NR2 134 aa14.02□□□□□ -0.16
CLK2-201ENST00000355560 KRTAP4-5Q9BYR2 181 aa14□□□□□ -0.17
CLK2-201ENST00000355560 A8MUU9 505 aa14□□□□□ -0.17
CLK2-201ENST00000355560 FP248Q71RG6 208 aaPredicted RBP13.99□□□□□ -0.17
CLK2-201ENST00000355560 IGKV2D-30A0A075B6S6 120 aa13.96□□□□□ -0.18
CLK2-201ENST00000355560 HRES1P13985 223 aa13.89□□□□□ -0.19
CLK2-201ENST00000355560 SMIM26A0A096LP01 95 aa13.88□□□□□ -0.19
CLK2-201ENST00000355560 Q75L30 129 aa13.85□□□□□ -0.19
CLK2-201ENST00000355560 C7orf65Q6ZTY9 151 aa13.83□□□□□ -0.2
CLK2-201ENST00000355560 COA5Q86WW8 74 aa13.79□□□□□ -0.2
CLK2-201ENST00000355560 BIRC6Q9NR09 4857 aa13.73□□□□□ -0.21
CLK2-201ENST00000355560 DMAC1Q96GE9 116 aa13.72□□□□□ -0.21
CLK2-201ENST00000355560 ABCA13Q86UQ4 5058 aa13.72□□□□□ -0.21
CLK2-201ENST00000355560 XP32Q5T750 250 aa13.72□□□□□ -0.21
CLK2-201ENST00000355560 MPLKIPQ8TAP9 179 aa13.69□□□□□ -0.22
CLK2-201ENST00000355560 RPL37P61927 97 aaKnown RBP13.67□□□□□ -0.22
CLK2-201ENST00000355560 ACYP2P14621 99 aa13.66□□□□□ -0.22
CLK2-201ENST00000355560 ATP11AUNQ6ZP68 121 aa13.66□□□□□ -0.22
CLK2-201ENST00000355560 C4orf26Q17RF5 130 aa13.64□□□□□ -0.23
CLK2-201ENST00000355560 HERC2O95714 4834 aa13.64□□□□□ -0.23
CLK2-201ENST00000355560 SPINK7P58062 85 aa13.63□□□□□ -0.23
CLK2-201ENST00000355560 TPRXLQ17RH7 258 aa13.57□□□□□ -0.24
CLK2-201ENST00000355560 J3QL48 77 aa13.56□□□□□ -0.24
CLK2-201ENST00000355560 Q1T7F1 81 aa13.55□□□□□ -0.24
CLK2-201ENST00000355560 CHKB-CPT1BH3BT56 60 aa13.49□□□□□ -0.25
CLK2-201ENST00000355560 A8MUN3 132 aa13.45□□□□□ -0.26
CLK2-201ENST00000355560 V9GYY9 64 aa13.45□□□□□ -0.26
CLK2-201ENST00000355560 LPAP08519 4548 aa13.39□□□□□ -0.27
CLK2-201ENST00000355560 LRP2P98164 4655 aa13.38□□□□□ -0.27
CLK2-201ENST00000355560 PSPHP1O15172 72 aa13.37□□□□□ -0.27
CLK2-201ENST00000355560 KRTAP3-1Q9BYR8 98 aa13.36□□□□□ -0.27
CLK2-201ENST00000355560 SVIPQ8NHG7 77 aa13.32□□□□□ -0.28
CLK2-201ENST00000355560 COX6B2Q6YFQ2 88 aa13.31□□□□□ -0.28
CLK2-201ENST00000355560 LINC01558Q9Y6Z2 57 aa13.29□□□□□ -0.28
CLK2-201ENST00000355560 PRR15LQ9BU68 103 aa13.28□□□□□ -0.28
CLK2-201ENST00000355560 Q5VV11 94 aa13.22□□□□□ -0.29
CLK2-201ENST00000355560 PCLOQ9Y6V0 5065 aa13.16□□□□□ -0.3
CLK2-201ENST00000355560 SPTSSBQ8NFR3 76 aa13.09□□□□□ -0.31
CLK2-201ENST00000355560 SEC61BP60468 96 aaKnown RBP13.07□□□□□ -0.32
CLK2-201ENST00000355560 BRK1Q8WUW1 75 aa13.04□□□□□ -0.32
CLK2-201ENST00000355560 A0A1B0GU69 56 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms