RNA–Protein interactions for RNA: ENST00000355371.8

SHTN1-202, Transcript of shootin 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SHTN1, Length 5,361 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHTN1-202ENST00000355371 LRBAP50851 2863 aa8.97□□□□□ -0.97
SHTN1-202ENST00000355371 KRTAP25-1Q3LHN0 102 aa8.96□□□□□ -0.97
SHTN1-202ENST00000355371 ADGRG4Q8IZF6 3080 aa8.96□□□□□ -0.98
SHTN1-202ENST00000355371 FRYLO94915 3013 aa8.94□□□□□ -0.98
SHTN1-202ENST00000355371 APCP25054 2843 aa8.92□□□□□ -0.98
SHTN1-202ENST00000355371 NIPBLQ6KC79 2804 aaeCLIP8.92□□□□□ -0.98
SHTN1-202ENST00000355371 NBEAQ8NFP9 2946 aa8.91□□□□□ -0.98
SHTN1-202ENST00000355371 BOD1L1Q8NFC6 3051 aa8.9□□□□□ -0.98
SHTN1-202ENST00000355371 DMXL2Q8TDJ6 3036 aa8.89□□□□□ -0.99
SHTN1-202ENST00000355371 KRTAP1-4P0C5Y4 121 aa8.89□□□□□ -0.99
SHTN1-202ENST00000355371 COL6A3P12111 3177 aa8.89□□□□□ -0.99
SHTN1-202ENST00000355371 FREM2Q5SZK8 3169 aa8.85□□□□□ -0.99
SHTN1-202ENST00000355371 EYSQ5T1H1 3165 aa8.82□□□□□ -1
SHTN1-202ENST00000355371 TNRC18O15417 2968 aaPredicted RBP8.8□□□□□ -1
SHTN1-202ENST00000355371 TENM4Q6N022 2769 aa8.79□□□□□ -1
SHTN1-202ENST00000355371 ZZEF1O43149 2961 aa8.78□□□□□ -1
SHTN1-202ENST00000355371 ASH1LQ9NR48 2969 aaKnown RBP8.77□□□□□ -1.01
SHTN1-202ENST00000355371 SPTBN5Q9NRC6 3674 aaKnown RBP8.76□□□□□ -1.01
SHTN1-202ENST00000355371 XP32Q5T750 250 aa8.75□□□□□ -1.01
SHTN1-202ENST00000355371 CELSR2Q9HCU4 2923 aa8.71□□□□□ -1.01
SHTN1-202ENST00000355371 TNP1P09430 55 aa8.7□□□□□ -1.02
SHTN1-202ENST00000355371 HRNRQ86YZ3 2850 aaPredicted RBP8.68□□□□□ -1.02
SHTN1-202ENST00000355371 ZANQ9Y493 2812 aa8.67□□□□□ -1.02
SHTN1-202ENST00000355371 REV3LO60673 3130 aa8.67□□□□□ -1.02
SHTN1-202ENST00000355371 KRTAP16-1A8MUX0 517 aa8.67□□□□□ -1.02
SHTN1-202ENST00000355371 DCHS2Q6V1P9 2916 aa8.65□□□□□ -1.03
SHTN1-202ENST00000355371 TPRXLQ17RH7 258 aa8.63□□□□□ -1.03
SHTN1-202ENST00000355371 CRYBG3Q68DQ2 2970 aa8.62□□□□□ -1.03
SHTN1-202ENST00000355371 USP34Q70CQ2 3546 aa8.61□□□□□ -1.03
SHTN1-202ENST00000355371 DMXL1Q9Y485 3027 aa8.6□□□□□ -1.03
SHTN1-202ENST00000355371 CFAP47Q6ZTR5 3102 aa8.6□□□□□ -1.03
SHTN1-202ENST00000355371 PP632Q6XCG6 107 aa8.54□□□□□ -1.04
SHTN1-202ENST00000355371 H0YAA0 97 aa8.51□□□□□ -1.05
SHTN1-202ENST00000355371 NDUFAF8A1L188 74 aa8.5□□□□□ -1.05
SHTN1-202ENST00000355371 KRTAP13-3Q3SY46 172 aa8.5□□□□□ -1.05
SHTN1-202ENST00000355371 SPEGQ15772 3267 aa8.49□□□□□ -1.05
SHTN1-202ENST00000355371 FBN2P35556 2912 aa8.43□□□□□ -1.06
SHTN1-202ENST00000355371 NF1P21359 2839 aa8.42□□□□□ -1.06
SHTN1-202ENST00000355371 C10orf95Q9H7T3 257 aa8.41□□□□□ -1.06
SHTN1-202ENST00000355371 LOC400499M0QZD8 3231 aa8.41□□□□□ -1.06
SHTN1-202ENST00000355371 A0A1B0GVY2 172 aa8.4□□□□□ -1.06
SHTN1-202ENST00000355371 KRTAP10-8P60410 259 aa8.39□□□□□ -1.07
SHTN1-202ENST00000355371 P0C880 135 aa8.3□□□□□ -1.08
SHTN1-202ENST00000355371 TENM1Q9UKZ4 2725 aa8.3□□□□□ -1.08
SHTN1-202ENST00000355371 TENM3Q9P273 2699 aa8.27□□□□□ -1.09
SHTN1-202ENST00000355371 TENM2Q9NT68 2774 aa8.27□□□□□ -1.09
SHTN1-202ENST00000355371 MXRA5Q9NR99 2828 aa8.26□□□□□ -1.09
SHTN1-202ENST00000355371 KRTAP10-10P60014 251 aa8.26□□□□□ -1.09
SHTN1-202ENST00000355371 CELSR1Q9NYQ6 3014 aa8.24□□□□□ -1.09
SHTN1-202ENST00000355371 PRO2289Q9P1D8 64 aa8.19□□□□□ -1.1
SHTN1-202ENST00000355371 MYO15AQ9UKN7 3530 aa8.18□□□□□ -1.1
SHTN1-202ENST00000355371 TGP01266 2768 aa8.16□□□□□ -1.1
SHTN1-202ENST00000355371 PDZD2O15018 2839 aa8.11□□□□□ -1.11
SHTN1-202ENST00000355371 RELNP78509 3460 aa8.09□□□□□ -1.11
SHTN1-202ENST00000355371 WDFY3Q8IZQ1 3526 aa8.01□□□□□ -1.13
SHTN1-202ENST00000355371 KRTAP12-2P59991 146 aa8□□□□□ -1.13
SHTN1-202ENST00000355371 KRTAP3-1Q9BYR8 98 aa7.95□□□□□ -1.14
SHTN1-202ENST00000355371 DCHS1Q96JQ0 3298 aa7.95□□□□□ -1.14
SHTN1-202ENST00000355371 PKD1L1Q8TDX9 2849 aa7.93□□□□□ -1.14
SHTN1-202ENST00000355371 KRTAP13-4Q3LI77 160 aa7.91□□□□□ -1.14
SHTN1-202ENST00000355371 KRTAP12-1P59990 96 aa7.9□□□□□ -1.14
SHTN1-202ENST00000355371 ASPMQ8IZT6 3477 aa7.9□□□□□ -1.15
SHTN1-202ENST00000355371 OTOGQ6ZRI0 2925 aa7.86□□□□□ -1.15
SHTN1-202ENST00000355371 LAMA5O15230 3695 aa7.85□□□□□ -1.15
SHTN1-202ENST00000355371 ZFHX4Q86UP3 3567 aa7.85□□□□□ -1.15
SHTN1-202ENST00000355371 NBPF19A0A087WUL8 3843 aa7.81□□□□□ -1.16
SHTN1-202ENST00000355371 VWFP04275 2813 aa7.8□□□□□ -1.16
SHTN1-202ENST00000355371 ANK3Q12955 4377 aaKnown RBP7.78□□□□□ -1.16
SHTN1-202ENST00000355371 KRTAP10-6P60371 365 aaPredicted RBP7.72□□□□□ -1.17
SHTN1-202ENST00000355371 FBN1P35555 2871 aaKnown RBP7.7□□□□□ -1.18
SHTN1-202ENST00000355371 DMDP11532 3685 aa7.7□□□□□ -1.18
SHTN1-202ENST00000355371 CSMD1Q96PZ7 3565 aa7.65□□□□□ -1.19
SHTN1-202ENST00000355371 MT1HL1P0DM35 61 aa7.64□□□□□ -1.19
SHTN1-202ENST00000355371 SMG1Q96Q15 3661 aaKnown RBP7.61□□□□□ -1.19
SHTN1-202ENST00000355371 MUC3AQ02505 3323 aa7.57□□□□□ -1.2
SHTN1-202ENST00000355371 FBN3Q75N90 2809 aa7.55□□□□□ -1.2
SHTN1-202ENST00000355371 ZFHX3Q15911 3703 aa7.53□□□□□ -1.2
SHTN1-202ENST00000355371 KRTAP10-4P60372 401 aaPredicted RBP7.51□□□□□ -1.21
SHTN1-202ENST00000355371 KRTAP3-3Q9BYR6 98 aa7.47□□□□□ -1.21
SHTN1-202ENST00000355371 MEGF8Q7Z7M0 2845 aa7.47□□□□□ -1.21
SHTN1-202ENST00000355371 KRTAP15-1Q3LI76 137 aa7.46□□□□□ -1.21
SHTN1-202ENST00000355371 KRTAP3-2Q9BYR7 98 aa7.46□□□□□ -1.21
SHTN1-202ENST00000355371 SVEP1Q4LDE5 3571 aa7.41□□□□□ -1.22
SHTN1-202ENST00000355371 CSMD2Q7Z408 3487 aa7.39□□□□□ -1.23
SHTN1-202ENST00000355371 SPENQ96T58 3664 aaKnown RBP7.37□□□□□ -1.23
SHTN1-202ENST00000355371 TRRAPQ9Y4A5 3859 aa7.37□□□□□ -1.23
SHTN1-202ENST00000355371 SRRM2Q9UQ35 2752 aaKnown RBP7.36□□□□□ -1.23
SHTN1-202ENST00000355371 HUWE1Q7Z6Z7 4374 aaKnown RBP7.35□□□□□ -1.23
SHTN1-202ENST00000355371 BSNQ9UPA5 3926 aa7.32□□□□□ -1.24
SHTN1-202ENST00000355371 KRTAP4-5Q9BYR2 181 aa7.27□□□□□ -1.25
SHTN1-202ENST00000355371 COL7A1Q02388 2944 aa7.25□□□□□ -1.25
SHTN1-202ENST00000355371 ALMS1Q8TCU4 4167 aa7.24□□□□□ -1.25
SHTN1-202ENST00000355371 KRTAP10-12P60413 245 aa7.22□□□□□ -1.25
SHTN1-202ENST00000355371 KRTAP23-1A1A580 65 aa7.14□□□□□ -1.27
SHTN1-202ENST00000355371 CUBNO60494 3623 aa7.13□□□□□ -1.27
SHTN1-202ENST00000355371 INE1O15225 51 aa7.06□□□□□ -1.28
SHTN1-202ENST00000355371 KRTAP12-3P60328 96 aa7.03□□□□□ -1.28
SHTN1-202ENST00000355371 VPS13CQ709C8 3753 aa6.97□□□□□ -1.29
SHTN1-202ENST00000355371 DNAH9Q9NYC9 4486 aa6.97□□□□□ -1.29
SHTN1-202ENST00000355371 LORP23490 312 aaPredicted RBP6.96□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms