RNA–Protein interactions for RNA: ENST00000354558.7

CKAP5-202, Transcript of cytoskeleton associated protein 5, humanhuman

TSL 1 (best) BASIC

Gene CKAP5, Length 6,428 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP5-202ENST00000354558 FRYLO94915 3013 aa2.69□□□□□ -1.98
CKAP5-202ENST00000354558 CRYBG3Q68DQ2 2970 aa2.69□□□□□ -1.98
CKAP5-202ENST00000354558 TEP1Q99973 2627 aaKnown RBP2.69□□□□□ -1.98
CKAP5-202ENST00000354558 KRTAP13-3Q3SY46 172 aa2.68□□□□□ -1.98
CKAP5-202ENST00000354558 LAMA5O15230 3695 aa2.67□□□□□ -1.98
CKAP5-202ENST00000354558 KMT2BQ9UMN6 2715 aaPredicted RBP2.67□□□□□ -1.98
CKAP5-202ENST00000354558 KRTAP13-1Q8IUC0 172 aa2.66□□□□□ -1.98
CKAP5-202ENST00000354558 PP632Q6XCG6 107 aa2.66□□□□□ -1.98
CKAP5-202ENST00000354558 LRBAP50851 2863 aa2.66□□□□□ -1.98
CKAP5-202ENST00000354558 TEX15Q9BXT5 2789 aa2.65□□□□□ -1.98
CKAP5-202ENST00000354558 FLG2Q5D862 2391 aaPredicted RBP2.65□□□□□ -1.99
CKAP5-202ENST00000354558 CRCT1Q9UGL9 99 aa2.65□□□□□ -1.99
CKAP5-202ENST00000354558 GCN1Q92616 2671 aaKnown RBP2.64□□□□□ -1.99
CKAP5-202ENST00000354558 KRTAP1-4P0C5Y4 121 aa2.64□□□□□ -1.99
CKAP5-202ENST00000354558 CENPEQ02224 2701 aa2.64□□□□□ -1.99
CKAP5-202ENST00000354558 ATMQ13315 3056 aa2.64□□□□□ -1.99
CKAP5-202ENST00000354558 COL12A1Q99715 3063 aa2.64□□□□□ -1.99
CKAP5-202ENST00000354558 NOTCH1P46531 2555 aa2.64□□□□□ -1.99
CKAP5-202ENST00000354558 KRTAP7-1Q8IUC3 87 aa2.63□□□□□ -1.99
CKAP5-202ENST00000354558 LOC400499M0QZD8 3231 aa2.63□□□□□ -1.99
CKAP5-202ENST00000354558 COL6A5A8TX70 2615 aa2.63□□□□□ -1.99
CKAP5-202ENST00000354558 RELNP78509 3460 aa2.63□□□□□ -1.99
CKAP5-202ENST00000354558 ITPR2Q14571 2701 aa2.62□□□□□ -1.99
CKAP5-202ENST00000354558 LCE2DQ5TA82 110 aaPredicted RBP2.61□□□□□ -1.99
CKAP5-202ENST00000354558 MUC3AQ02505 3323 aa2.61□□□□□ -1.99
CKAP5-202ENST00000354558 ZFHX4Q86UP3 3567 aa2.61□□□□□ -1.99
CKAP5-202ENST00000354558 UTP20O75691 2785 aaKnown RBP2.61□□□□□ -1.99
CKAP5-202ENST00000354558 KRTAP25-1Q3LHN0 102 aa2.6□□□□□ -1.99
CKAP5-202ENST00000354558 NBEAQ8NFP9 2946 aa2.6□□□□□ -1.99
CKAP5-202ENST00000354558 UNC79Q9P2D8 2635 aa2.59□□□□□ -1.99
CKAP5-202ENST00000354558 H0YAA0 97 aa2.59□□□□□ -1.99
CKAP5-202ENST00000354558 DCHS1Q96JQ0 3298 aa2.59□□□□□ -2
CKAP5-202ENST00000354558 KRTAP16-1A8MUX0 517 aa2.58□□□□□ -2
CKAP5-202ENST00000354558 CHD6Q8TD26 2715 aa2.58□□□□□ -2
CKAP5-202ENST00000354558 DMBT1Q9UGM3 2413 aaPredicted RBP2.57□□□□□ -2
CKAP5-202ENST00000354558 ADGRG4Q8IZF6 3080 aa2.57□□□□□ -2
CKAP5-202ENST00000354558 BSNQ9UPA5 3926 aa2.56□□□□□ -2
CKAP5-202ENST00000354558 LORP23490 312 aaPredicted RBP2.55□□□□□ -2
CKAP5-202ENST00000354558 HIVEP1P15822 2718 aa2.55□□□□□ -2
CKAP5-202ENST00000354558 KALRNO60229 2985 aa2.54□□□□□ -2
CKAP5-202ENST00000354558 TACC2O95359 2948 aa2.54□□□□□ -2
CKAP5-202ENST00000354558 NBEAL1Q6ZS30 2694 aa2.54□□□□□ -2
CKAP5-202ENST00000354558 SMG1Q96Q15 3661 aaKnown RBP2.54□□□□□ -2
CKAP5-202ENST00000354558 MAP1AP78559 2803 aaPredicted RBP2.54□□□□□ -2
CKAP5-202ENST00000354558 KRTAP15-1Q3LI76 137 aa2.54□□□□□ -2
CKAP5-202ENST00000354558 ANK3Q12955 4377 aaKnown RBP2.54□□□□□ -2
CKAP5-202ENST00000354558 TENM4Q6N022 2769 aa2.53□□□□□ -2
CKAP5-202ENST00000354558 NDUFAF8A1L188 74 aa2.53□□□□□ -2
CKAP5-202ENST00000354558 STAB2Q8WWQ8 2551 aa2.53□□□□□ -2
CKAP5-202ENST00000354558 APCP25054 2843 aa2.53□□□□□ -2
CKAP5-202ENST00000354558 SPENQ96T58 3664 aaKnown RBP2.53□□□□□ -2.01
CKAP5-202ENST00000354558 KRTAP12-2P59991 146 aa2.52□□□□□ -2.01
CKAP5-202ENST00000354558 ZFHX3Q15911 3703 aa2.51□□□□□ -2.01
CKAP5-202ENST00000354558 CELSR2Q9HCU4 2923 aa2.5□□□□□ -2.01
CKAP5-202ENST00000354558 CSMD1Q96PZ7 3565 aa2.5□□□□□ -2.01
CKAP5-202ENST00000354558 ITPR1Q14643 2758 aa2.5□□□□□ -2.01
CKAP5-202ENST00000354558 ZZEF1O43149 2961 aa2.49□□□□□ -2.01
CKAP5-202ENST00000354558 UBR5O95071 2799 aaPredicted RBP2.49□□□□□ -2.01
CKAP5-202ENST00000354558 FLNCQ14315 2725 aa2.48□□□□□ -2.01
CKAP5-202ENST00000354558 ASH1LQ9NR48 2969 aaKnown RBP2.47□□□□□ -2.01
CKAP5-202ENST00000354558 CSMD2Q7Z408 3487 aa2.47□□□□□ -2.01
CKAP5-202ENST00000354558 NBEAL2Q6ZNJ1 2754 aa2.46□□□□□ -2.02
CKAP5-202ENST00000354558 HRNRQ86YZ3 2850 aaPredicted RBP2.45□□□□□ -2.02
CKAP5-202ENST00000354558 NSD1Q96L73 2696 aaPredicted RBP2.45□□□□□ -2.02
CKAP5-202ENST00000354558 FBN2P35556 2912 aa2.44□□□□□ -2.02
CKAP5-202ENST00000354558 AKAP9Q99996 3911 aa2.44□□□□□ -2.02
CKAP5-202ENST00000354558 KRTAP10-6P60371 365 aaPredicted RBP2.44□□□□□ -2.02
CKAP5-202ENST00000354558 LCE2CQ5TA81 110 aa2.43□□□□□ -2.02
CKAP5-202ENST00000354558 SVEP1Q4LDE5 3571 aa2.43□□□□□ -2.02
CKAP5-202ENST00000354558 LCE2BO14633 110 aa2.43□□□□□ -2.02
CKAP5-202ENST00000354558 KRTAP4-5Q9BYR2 181 aa2.43□□□□□ -2.02
CKAP5-202ENST00000354558 KRTAP8-1Q8IUC2 63 aa2.42□□□□□ -2.02
CKAP5-202ENST00000354558 NIPBLQ6KC79 2804 aaeCLIP2.42□□□□□ -2.025e-7■■■□□ 14.8
CKAP5-202ENST00000354558 VPS13CQ709C8 3753 aa2.42□□□□□ -2.02
CKAP5-202ENST00000354558 KRTAP13-4Q3LI77 160 aa2.41□□□□□ -2.02
CKAP5-202ENST00000354558 PDZD2O15018 2839 aa2.4□□□□□ -2.02
CKAP5-202ENST00000354558 KRTAP10-12P60413 245 aa2.4□□□□□ -2.03
CKAP5-202ENST00000354558 DCHS2Q6V1P9 2916 aa2.39□□□□□ -2.03
CKAP5-202ENST00000354558 HUWE1Q7Z6Z7 4374 aaKnown RBP2.38□□□□□ -2.03
CKAP5-202ENST00000354558 TENM2Q9NT68 2774 aa2.37□□□□□ -2.03
CKAP5-202ENST00000354558 CELSR1Q9NYQ6 3014 aa2.37□□□□□ -2.03
CKAP5-202ENST00000354558 ALMS1Q8TCU4 4167 aa2.36□□□□□ -2.03
CKAP5-202ENST00000354558 ZANQ9Y493 2812 aa2.36□□□□□ -2.03
CKAP5-202ENST00000354558 FBN1P35555 2871 aaKnown RBP2.35□□□□□ -2.03
CKAP5-202ENST00000354558 NF1P21359 2839 aa2.35□□□□□ -2.03
CKAP5-202ENST00000354558 TRRAPQ9Y4A5 3859 aa2.35□□□□□ -2.03
CKAP5-202ENST00000354558 OTOGQ6ZRI0 2925 aa2.34□□□□□ -2.03
CKAP5-202ENST00000354558 ZNF469Q96JG9 3925 aaPredicted RBP2.34□□□□□ -2.04
CKAP5-202ENST00000354558 CUBNO60494 3623 aa2.33□□□□□ -2.04
CKAP5-202ENST00000354558 MT1HL1P0DM35 61 aa2.32□□□□□ -2.04
CKAP5-202ENST00000354558 KRTAP23-1A1A580 65 aa2.31□□□□□ -2.04
CKAP5-202ENST00000354558 MXRA5Q9NR99 2828 aa2.29□□□□□ -2.04
CKAP5-202ENST00000354558 SPRR2FQ96RM1 72 aa2.29□□□□□ -2.04
CKAP5-202ENST00000354558 KRTAP12-1P59990 96 aa2.28□□□□□ -2.05
CKAP5-202ENST00000354558 SPRR2EP22531 72 aa2.27□□□□□ -2.05
CKAP5-202ENST00000354558 SPRR2BP35325 72 aa2.27□□□□□ -2.05
CKAP5-202ENST00000354558 SPRR2AP35326 72 aa2.27□□□□□ -2.05
CKAP5-202ENST00000354558 TENM1Q9UKZ4 2725 aa2.26□□□□□ -2.05
CKAP5-202ENST00000354558 KRTAP10-5P60370 271 aa2.26□□□□□ -2.05
CKAP5-202ENST00000354558 KRTAP10-7P60409 375 aaPredicted RBP2.25□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms