RNA–Protein interactions for RNA: ENST00000354193.4

SVIP-201, Transcript of small VCP interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SVIP, Length 4,541 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-201ENST00000354193 DYNC2H1Q8NCM8 4307 aaKnown RBP6.43□□□□□ -1.38
SVIP-201ENST00000354193 SPINK1P00995 79 aa6.43□□□□□ -1.38
SVIP-201ENST00000354193 KRTAP1-4P0C5Y4 121 aa6.43□□□□□ -1.38
SVIP-201ENST00000354193 TMEM258P61165 79 aa6.43□□□□□ -1.38
SVIP-201ENST00000354193 A0A1B0GVY2 172 aa6.42□□□□□ -1.38
SVIP-201ENST00000354193 LRP1BQ9NZR2 4599 aa6.42□□□□□ -1.38
SVIP-201ENST00000354193 MPLKIPQ8TAP9 179 aa6.4□□□□□ -1.39
SVIP-201ENST00000354193 FRAS1Q86XX4 4008 aa6.4□□□□□ -1.39
SVIP-201ENST00000354193 PKHD1P08F94 4074 aa6.39□□□□□ -1.39
SVIP-201ENST00000354193 DNAH17Q9UFH2 4485 aa6.39□□□□□ -1.39
SVIP-201ENST00000354193 H7BZZ5 65 aa6.39□□□□□ -1.39
SVIP-201ENST00000354193 CD164Q04900 197 aa6.38□□□□□ -1.39
SVIP-201ENST00000354193 SACSQ9NZJ4 4579 aa6.37□□□□□ -1.39
SVIP-201ENST00000354193 NDUFC1O43677 76 aa6.37□□□□□ -1.39
SVIP-201ENST00000354193 KLKP1Q107X0 134 aa6.37□□□□□ -1.39
SVIP-201ENST00000354193 SPAG11AQ6PDA7 123 aa6.36□□□□□ -1.39
SVIP-201ENST00000354193 HECTD4Q9Y4D8 3996 aa6.36□□□□□ -1.39
SVIP-201ENST00000354193 A0A0U1RQV1 116 aa6.34□□□□□ -1.39
SVIP-201ENST00000354193 TP53AIP1Q9HCN2 124 aa6.34□□□□□ -1.39
SVIP-201ENST00000354193 DYNC1H1Q14204 4646 aaKnown RBP6.34□□□□□ -1.39
SVIP-201ENST00000354193 DNAH8Q96JB1 4490 aa6.34□□□□□ -1.39
SVIP-201ENST00000354193 KRTAP29-1A8MX34 341 aaPredicted RBP6.33□□□□□ -1.4
SVIP-201ENST00000354193 C8orf87E5RJ46 101 aa6.33□□□□□ -1.4
SVIP-201ENST00000354193 J3QL48 77 aa6.31□□□□□ -1.4
SVIP-201ENST00000354193 CHKB-CPT1BH3BT56 60 aa6.3□□□□□ -1.4
SVIP-201ENST00000354193 KIAA1109Q2LD37 5005 aa6.3□□□□□ -1.4
SVIP-201ENST00000354193 ALMS1Q8TCU4 4167 aa6.29□□□□□ -1.4
SVIP-201ENST00000354193 Q8N1X5 172 aa6.29□□□□□ -1.4
SVIP-201ENST00000354193 Q5W150 140 aa6.28□□□□□ -1.4
SVIP-201ENST00000354193 Q8N9P0 234 aaPredicted RBP6.28□□□□□ -1.4
SVIP-201ENST00000354193 VPS13BQ7Z7G8 4022 aa6.26□□□□□ -1.41
SVIP-201ENST00000354193 IGLV7-46A0A075B6I9 117 aa6.25□□□□□ -1.41
SVIP-201ENST00000354193 SERP1Q9Y6X1 66 aa6.24□□□□□ -1.41
SVIP-201ENST00000354193 RYR2Q92736 4967 aa6.22□□□□□ -1.41
SVIP-201ENST00000354193 RYR3Q15413 4870 aa6.22□□□□□ -1.41
SVIP-201ENST00000354193 LOC101927531A0A1B0GV80 90 aa6.21□□□□□ -1.41
SVIP-201ENST00000354193 PSPHP1O15172 72 aa6.21□□□□□ -1.42
SVIP-201ENST00000354193 FAT2Q9NYQ8 4349 aa6.21□□□□□ -1.42
SVIP-201ENST00000354193 ATP5EP56381 51 aaPredicted RBP6.21□□□□□ -1.42
SVIP-201ENST00000354193 ATP11AUNQ6ZP68 121 aa6.2□□□□□ -1.42
SVIP-201ENST00000354193 C7orf65Q6ZTY9 151 aa6.2□□□□□ -1.42
SVIP-201ENST00000354193 H3BPC8 53 aa6.2□□□□□ -1.42
SVIP-201ENST00000354193 C4orf26Q17RF5 130 aa6.2□□□□□ -1.42
SVIP-201ENST00000354193 APOBP04114 4563 aaKnown RBP6.18□□□□□ -1.42
SVIP-201ENST00000354193 ASB16-AS1Q495Z4 193 aa6.17□□□□□ -1.42
SVIP-201ENST00000354193 SMIM26A0A096LP01 95 aa6.17□□□□□ -1.42
SVIP-201ENST00000354193 OXTP01178 125 aa6.16□□□□□ -1.42
SVIP-201ENST00000354193 HRES1P13985 223 aa6.16□□□□□ -1.42
SVIP-201ENST00000354193 CYP4F30PQ9H0H9 118 aa6.16□□□□□ -1.42
SVIP-201ENST00000354193 LRP1Q07954 4544 aaKnown RBP6.15□□□□□ -1.42
SVIP-201ENST00000354193 COA5Q86WW8 74 aa6.15□□□□□ -1.43
SVIP-201ENST00000354193 KRTAP10-4P60372 401 aaPredicted RBP6.14□□□□□ -1.43
SVIP-201ENST00000354193 PKD1P98161 4303 aa6.14□□□□□ -1.43
SVIP-201ENST00000354193 Q5XG85 94 aa6.14□□□□□ -1.43
SVIP-201ENST00000354193 ZCCHC13Q8WW36 166 aaKnown RBP6.14□□□□□ -1.43
SVIP-201ENST00000354193 KRTAP4-5Q9BYR2 181 aa6.13□□□□□ -1.43
SVIP-201ENST00000354193 RYR1P21817 5038 aa6.12□□□□□ -1.43
SVIP-201ENST00000354193 MYCBP2O75592 4640 aa6.12□□□□□ -1.43
SVIP-201ENST00000354193 PRR15LQ9BU68 103 aa6.1□□□□□ -1.43
SVIP-201ENST00000354193 RPS28P62857 69 aaKnown RBP6.1□□□□□ -1.43
SVIP-201ENST00000354193 BRK1Q8WUW1 75 aa6.1□□□□□ -1.43
SVIP-201ENST00000354193 ACYP2P14621 99 aa6.09□□□□□ -1.43
SVIP-201ENST00000354193 SPINK7P58062 85 aa6.09□□□□□ -1.43
SVIP-201ENST00000354193 KRTAP17-1Q9BYP8 105 aa6.06□□□□□ -1.44
SVIP-201ENST00000354193 FAT3Q8TDW7 4589 aa6.06□□□□□ -1.44
SVIP-201ENST00000354193 KRTAP10-8P60410 259 aa6.06□□□□□ -1.44
SVIP-201ENST00000354193 RPS29P62273 56 aaKnown RBP6.05□□□□□ -1.44
SVIP-201ENST00000354193 A8MUN3 132 aa6.05□□□□□ -1.44
SVIP-201ENST00000354193 KRTAP16-1A8MUX0 517 aa6.05□□□□□ -1.44
SVIP-201ENST00000354193 SPANXA2-OT1Q8N9U9 137 aa6.04□□□□□ -1.44
SVIP-201ENST00000354193 EPPK1P58107 5090 aaKnown RBP6.04□□□□□ -1.44
SVIP-201ENST00000354193 FP248Q71RG6 208 aaPredicted RBP6.02□□□□□ -1.45
SVIP-201ENST00000354193 A6NED7 52 aa6.02□□□□□ -1.45
SVIP-201ENST00000354193 SPTSSBQ8NFR3 76 aa5.99□□□□□ -1.45
SVIP-201ENST00000354193 SEC61GP60059 68 aa5.98□□□□□ -1.45
SVIP-201ENST00000354193 MT1HL1P0DM35 61 aa5.96□□□□□ -1.46
SVIP-201ENST00000354193 A8MUU9 505 aa5.95□□□□□ -1.46
SVIP-201ENST00000354193 XP32Q5T750 250 aa5.95□□□□□ -1.46
SVIP-201ENST00000354193 V9GYY9 64 aa5.95□□□□□ -1.46
SVIP-201ENST00000354193 HSPG2P98160 4391 aa5.94□□□□□ -1.46
SVIP-201ENST00000354193 A0A1B0GU69 56 aa5.94□□□□□ -1.46
SVIP-201ENST00000354193 C20orf166-AS1Q96NR2 134 aa5.94□□□□□ -1.46
SVIP-201ENST00000354193 KRTAP13-3Q3SY46 172 aa5.92□□□□□ -1.46
SVIP-201ENST00000354193 Q75L30 129 aa5.91□□□□□ -1.46
SVIP-201ENST00000354193 DMAC1Q96GE9 116 aa5.9□□□□□ -1.46
SVIP-201ENST00000354193 RPL37P61927 97 aaKnown RBP5.9□□□□□ -1.47
SVIP-201ENST00000354193 COX6B2Q6YFQ2 88 aa5.9□□□□□ -1.47
SVIP-201ENST00000354193 RBM12B-AS1Q9P1G2 102 aa5.85□□□□□ -1.47
SVIP-201ENST00000354193 HERC2O95714 4834 aa5.85□□□□□ -1.47
SVIP-201ENST00000354193 Q1T7F1 81 aa5.81□□□□□ -1.48
SVIP-201ENST00000354193 SEC61BP60468 96 aaKnown RBP5.81□□□□□ -1.48
SVIP-201ENST00000354193 Q5VV11 94 aa5.78□□□□□ -1.48
SVIP-201ENST00000354193 LRP2P98164 4655 aa5.78□□□□□ -1.48
SVIP-201ENST00000354193 TPRXLQ17RH7 258 aa5.77□□□□□ -1.49
SVIP-201ENST00000354193 A8MU10 97 aa5.76□□□□□ -1.49
SVIP-201ENST00000354193 LINC01558Q9Y6Z2 57 aa5.75□□□□□ -1.49
SVIP-201ENST00000354193 S4R3F8 94 aa5.75□□□□□ -1.49
SVIP-201ENST00000354193 ABCA13Q86UQ4 5058 aa5.75□□□□□ -1.49
SVIP-201ENST00000354193 PMAIP1Q13794 54 aa5.74□□□□□ -1.49
SVIP-201ENST00000354193 A0A0D9SG42 100 aa5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 118.2 ms