RNA–Protein interactions for RNA: ENST00000348165.9

UBE3C-201, Transcript of ubiquitin protein ligase E3C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3C, Length 5,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3C-201ENST00000348165 DCHS2Q6V1P9 2916 aa10.92□□□□□ -0.66
UBE3C-201ENST00000348165 KRTAP11-1Q8IUC1 163 aa10.89□□□□□ -0.67
UBE3C-201ENST00000348165 SPEGQ15772 3267 aa10.89□□□□□ -0.67
UBE3C-201ENST00000348165 R4GN34 69 aa10.87□□□□□ -0.67
UBE3C-201ENST00000348165 Q6ZRN7 208 aaPredicted RBP10.85□□□□□ -0.67
UBE3C-201ENST00000348165 ROMO1P60602 79 aa10.84□□□□□ -0.67
UBE3C-201ENST00000348165 KRTAP16-1A8MUX0 517 aa10.81□□□□□ -0.68
UBE3C-201ENST00000348165 TNRC18O15417 2968 aaPredicted RBP10.8□□□□□ -0.68
UBE3C-201ENST00000348165 NOTCH2NLQ7Z3S9 236 aa10.8□□□□□ -0.68
UBE3C-201ENST00000348165 KRTAP29-1A8MX34 341 aaPredicted RBP10.79□□□□□ -0.68
UBE3C-201ENST00000348165 KRTAP7-1Q8IUC3 87 aa10.78□□□□□ -0.68
UBE3C-201ENST00000348165 SPATA8Q6RVD6 105 aa10.78□□□□□ -0.68
UBE3C-201ENST00000348165 RPL37P61927 97 aaKnown RBP10.77□□□□□ -0.68
UBE3C-201ENST00000348165 DMXL1Q9Y485 3027 aa10.77□□□□□ -0.69
UBE3C-201ENST00000348165 H1FX-AS1Q4G0G2 97 aa10.69□□□□□ -0.7
UBE3C-201ENST00000348165 A8MU10 97 aa10.69□□□□□ -0.7
UBE3C-201ENST00000348165 ADM2Q7Z4H4 148 aa10.67□□□□□ -0.7
UBE3C-201ENST00000348165 NF1P21359 2839 aa10.67□□□□□ -0.7
UBE3C-201ENST00000348165 M0QZ58 72 aa10.66□□□□□ -0.7
UBE3C-201ENST00000348165 TENM3Q9P273 2699 aa10.66□□□□□ -0.7
UBE3C-201ENST00000348165 KRTAP25-1Q3LHN0 102 aa10.66□□□□□ -0.7
UBE3C-201ENST00000348165 FBN2P35556 2912 aa10.63□□□□□ -0.71
UBE3C-201ENST00000348165 USP34Q70CQ2 3546 aa10.62□□□□□ -0.71
UBE3C-201ENST00000348165 KRTAP13-2Q52LG2 175 aa10.61□□□□□ -0.71
UBE3C-201ENST00000348165 MYO15AQ9UKN7 3530 aa10.61□□□□□ -0.71
UBE3C-201ENST00000348165 LOC400499M0QZD8 3231 aa10.57□□□□□ -0.72
UBE3C-201ENST00000348165 KRTAP13-1Q8IUC0 172 aa10.56□□□□□ -0.72
UBE3C-201ENST00000348165 RPS29P62273 56 aaKnown RBP10.51□□□□□ -0.73
UBE3C-201ENST00000348165 TENM1Q9UKZ4 2725 aa10.51□□□□□ -0.73
UBE3C-201ENST00000348165 HRNRQ86YZ3 2850 aaPredicted RBP10.5□□□□□ -0.73
UBE3C-201ENST00000348165 NDUFAF8A1L188 74 aa10.5□□□□□ -0.73
UBE3C-201ENST00000348165 KRTAP21-3Q3LHN1 58 aa10.45□□□□□ -0.74
UBE3C-201ENST00000348165 PLAC4Q8WY50 150 aa10.38□□□□□ -0.75
UBE3C-201ENST00000348165 PKD1L1Q8TDX9 2849 aa10.35□□□□□ -0.75
UBE3C-201ENST00000348165 TENM2Q9NT68 2774 aa10.3□□□□□ -0.76
UBE3C-201ENST00000348165 DCHS1Q96JQ0 3298 aa10.29□□□□□ -0.76
UBE3C-201ENST00000348165 MXRA5Q9NR99 2828 aa10.28□□□□□ -0.76
UBE3C-201ENST00000348165 A8MUU9 505 aa10.27□□□□□ -0.76
UBE3C-201ENST00000348165 CELSR1Q9NYQ6 3014 aa10.25□□□□□ -0.77
UBE3C-201ENST00000348165 C20orf166-AS1Q96NR2 134 aa10.23□□□□□ -0.77
UBE3C-201ENST00000348165 WDFY3Q8IZQ1 3526 aa10.17□□□□□ -0.78
UBE3C-201ENST00000348165 RELNP78509 3460 aa10.14□□□□□ -0.79
UBE3C-201ENST00000348165 KRTAP1-4P0C5Y4 121 aa10.13□□□□□ -0.79
UBE3C-201ENST00000348165 VWFP04275 2813 aa10.12□□□□□ -0.79
UBE3C-201ENST00000348165 LAMA5O15230 3695 aa10□□□□□ -0.81
UBE3C-201ENST00000348165 TGP01266 2768 aa9.99□□□□□ -0.81
UBE3C-201ENST00000348165 DMDP11532 3685 aa9.99□□□□□ -0.81
UBE3C-201ENST00000348165 XP32Q5T750 250 aa9.99□□□□□ -0.81
UBE3C-201ENST00000348165 ASPMQ8IZT6 3477 aa9.97□□□□□ -0.81
UBE3C-201ENST00000348165 ZFHX4Q86UP3 3567 aa9.95□□□□□ -0.82
UBE3C-201ENST00000348165 PDZD2O15018 2839 aa9.94□□□□□ -0.82
UBE3C-201ENST00000348165 FBN1P35555 2871 aaKnown RBP9.92□□□□□ -0.82
UBE3C-201ENST00000348165 MUC3AQ02505 3323 aa9.91□□□□□ -0.82
UBE3C-201ENST00000348165 SRRM2Q9UQ35 2752 aaKnown RBP9.89□□□□□ -0.83
UBE3C-201ENST00000348165 C10orf95Q9H7T3 257 aa9.83□□□□□ -0.84
UBE3C-201ENST00000348165 A0A1B0GVY2 172 aa9.82□□□□□ -0.84
UBE3C-201ENST00000348165 TNP1P09430 55 aa9.8□□□□□ -0.84
UBE3C-201ENST00000348165 H0YAA0 97 aa9.77□□□□□ -0.85
UBE3C-201ENST00000348165 TPRXLQ17RH7 258 aa9.76□□□□□ -0.85
UBE3C-201ENST00000348165 P0C880 135 aa9.7□□□□□ -0.86
UBE3C-201ENST00000348165 KRTAP10-8P60410 259 aa9.67□□□□□ -0.86
UBE3C-201ENST00000348165 KRTAP13-3Q3SY46 172 aa9.66□□□□□ -0.86
UBE3C-201ENST00000348165 OTOGQ6ZRI0 2925 aa9.66□□□□□ -0.86
UBE3C-201ENST00000348165 ZFHX3Q15911 3703 aa9.66□□□□□ -0.86
UBE3C-201ENST00000348165 SMG1Q96Q15 3661 aaKnown RBP9.65□□□□□ -0.86
UBE3C-201ENST00000348165 PP632Q6XCG6 107 aa9.62□□□□□ -0.87
UBE3C-201ENST00000348165 CSMD1Q96PZ7 3565 aa9.61□□□□□ -0.87
UBE3C-201ENST00000348165 NBPF19A0A087WUL8 3843 aa9.6□□□□□ -0.87
UBE3C-201ENST00000348165 KRTAP10-10P60014 251 aa9.56□□□□□ -0.88
UBE3C-201ENST00000348165 FBN3Q75N90 2809 aa9.43□□□□□ -0.9
UBE3C-201ENST00000348165 SVEP1Q4LDE5 3571 aa9.42□□□□□ -0.9
UBE3C-201ENST00000348165 SPENQ96T58 3664 aaKnown RBP9.33□□□□□ -0.92
UBE3C-201ENST00000348165 COL7A1Q02388 2944 aa9.3□□□□□ -0.92
UBE3C-201ENST00000348165 CUBNO60494 3623 aa9.29□□□□□ -0.92
UBE3C-201ENST00000348165 CSMD2Q7Z408 3487 aa9.29□□□□□ -0.92
UBE3C-201ENST00000348165 PRO2289Q9P1D8 64 aa9.24□□□□□ -0.93
UBE3C-201ENST00000348165 MEGF8Q7Z7M0 2845 aa9.21□□□□□ -0.93
UBE3C-201ENST00000348165 BSNQ9UPA5 3926 aa9.19□□□□□ -0.94
UBE3C-201ENST00000348165 ANK3Q12955 4377 aaKnown RBP9.13□□□□□ -0.95
UBE3C-201ENST00000348165 TRRAPQ9Y4A5 3859 aa9.06□□□□□ -0.96
UBE3C-201ENST00000348165 KRTAP12-2P59991 146 aa9.04□□□□□ -0.96
UBE3C-201ENST00000348165 KRTAP3-1Q9BYR8 98 aa9.03□□□□□ -0.96
UBE3C-201ENST00000348165 KRTAP12-1P59990 96 aa8.89□□□□□ -0.99
UBE3C-201ENST00000348165 KRTAP13-4Q3LI77 160 aa8.81□□□□□ -1
UBE3C-201ENST00000348165 MT1HL1P0DM35 61 aa8.81□□□□□ -1
UBE3C-201ENST00000348165 KRTAP15-1Q3LI76 137 aa8.74□□□□□ -1.01
UBE3C-201ENST00000348165 VPS13CQ709C8 3753 aa8.72□□□□□ -1.01
UBE3C-201ENST00000348165 KRTAP10-6P60371 365 aaPredicted RBP8.71□□□□□ -1.01
UBE3C-201ENST00000348165 KRTAP4-5Q9BYR2 181 aa8.66□□□□□ -1.02
UBE3C-201ENST00000348165 KRTAP10-4P60372 401 aaPredicted RBP8.58□□□□□ -1.04
UBE3C-201ENST00000348165 INE1O15225 51 aa8.51□□□□□ -1.05
UBE3C-201ENST00000348165 HUWE1Q7Z6Z7 4374 aaKnown RBP8.51□□□□□ -1.05
UBE3C-201ENST00000348165 ZNF469Q96JG9 3925 aaPredicted RBP8.5□□□□□ -1.05
UBE3C-201ENST00000348165 KRTAP3-3Q9BYR6 98 aa8.45□□□□□ -1.06
UBE3C-201ENST00000348165 KRTAP3-2Q9BYR7 98 aa8.41□□□□□ -1.06
UBE3C-201ENST00000348165 AKAP9Q99996 3911 aa8.33□□□□□ -1.08
UBE3C-201ENST00000348165 CSMD3Q7Z407 3707 aa8.29□□□□□ -1.08
UBE3C-201ENST00000348165 KRTAP10-12P60413 245 aa8.19□□□□□ -1.1
UBE3C-201ENST00000348165 DNAH5Q8TE73 4624 aa8.15□□□□□ -1.1
UBE3C-201ENST00000348165 DNAH9Q9NYC9 4486 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms