RNA–Protein interactions for RNA: ENST00000341316.6

SPG7-202, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 1 (best) BASIC

Gene SPG7, Length 2,288 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-202ENST00000341316 C1orf195Q5TG92 126 aa11.92□□□□□ -0.5
SPG7-202ENST00000341316 V9GYY9 64 aa11.91□□□□□ -0.5
SPG7-202ENST00000341316 ASB16-AS1Q495Z4 193 aa11.89□□□□□ -0.51
SPG7-202ENST00000341316 C8orf17Q9NRJ1 99 aa11.88□□□□□ -0.51
SPG7-202ENST00000341316 KRTAP10-1P60331 282 aa11.86□□□□□ -0.51
SPG7-202ENST00000341316 Q8N9P0 234 aaPredicted RBP11.86□□□□□ -0.51
SPG7-202ENST00000341316 PCOTHQ58A44 107 aa11.85□□□□□ -0.51
SPG7-202ENST00000341316 Q5VV11 94 aa11.85□□□□□ -0.51
SPG7-202ENST00000341316 TP53AIP1Q9HCN2 124 aa11.85□□□□□ -0.51
SPG7-202ENST00000341316 IGLV7-46A0A075B6I9 117 aa11.84□□□□□ -0.51
SPG7-202ENST00000341316 IGHV6-1A0A0B4J1U7 121 aa11.84□□□□□ -0.51
SPG7-202ENST00000341316 A0A1B0GVX0 72 aa11.83□□□□□ -0.52
SPG7-202ENST00000341316 Q6ZSA8 131 aa11.83□□□□□ -0.52
SPG7-202ENST00000341316 COA5Q86WW8 74 aa11.83□□□□□ -0.52
SPG7-202ENST00000341316 CD164Q04900 197 aa11.81□□□□□ -0.52
SPG7-202ENST00000341316 A0A087X002 238 aa11.8□□□□□ -0.52
SPG7-202ENST00000341316 NDUFS5O43920 106 aa11.8□□□□□ -0.52
SPG7-202ENST00000341316 NOTCH2NLQ7Z3S9 236 aa11.8□□□□□ -0.52
SPG7-202ENST00000341316 LIMD2Q9BT23 127 aa11.8□□□□□ -0.52
SPG7-202ENST00000341316 SACSQ9NZJ4 4579 aa11.79□□□□□ -0.52
SPG7-202ENST00000341316 PRR15LQ9BU68 103 aa11.77□□□□□ -0.52
SPG7-202ENST00000341316 CDK2AP2O75956 126 aa11.77□□□□□ -0.53
SPG7-202ENST00000341316 A8MU10 97 aa11.76□□□□□ -0.53
SPG7-202ENST00000341316 SPINK6Q6UWN8 80 aa11.76□□□□□ -0.53
SPG7-202ENST00000341316 VPS13BQ7Z7G8 4022 aa11.76□□□□□ -0.53
SPG7-202ENST00000341316 MRPL34Q9BQ48 92 aaKnown RBP11.75□□□□□ -0.53
SPG7-202ENST00000341316 PKHD1P08F94 4074 aa11.75□□□□□ -0.53
SPG7-202ENST00000341316 CHKB-CPT1BH3BT56 60 aa11.74□□□□□ -0.53
SPG7-202ENST00000341316 SSBP3-AS1Q7Z2R9 100 aa11.73□□□□□ -0.53
SPG7-202ENST00000341316 KRTAP21-3Q3LHN1 58 aa11.72□□□□□ -0.53
SPG7-202ENST00000341316 KRTAP13-2Q52LG2 175 aa11.71□□□□□ -0.53
SPG7-202ENST00000341316 LOC101927531A0A1B0GV80 90 aa11.65□□□□□ -0.55
SPG7-202ENST00000341316 Q75L30 129 aa11.65□□□□□ -0.55
SPG7-202ENST00000341316 KRTAP1-4P0C5Y4 121 aa11.63□□□□□ -0.55
SPG7-202ENST00000341316 PMAIP1Q13794 54 aa11.62□□□□□ -0.55
SPG7-202ENST00000341316 HRES1P13985 223 aa11.61□□□□□ -0.55
SPG7-202ENST00000341316 SPAG11AQ6PDA7 123 aa11.61□□□□□ -0.55
SPG7-202ENST00000341316 Q5W150 140 aa11.58□□□□□ -0.55
SPG7-202ENST00000341316 A6NED7 52 aa11.58□□□□□ -0.56
SPG7-202ENST00000341316 DYNC1H1Q14204 4646 aaKnown RBP11.57□□□□□ -0.56
SPG7-202ENST00000341316 LINC01558Q9Y6Z2 57 aa11.57□□□□□ -0.56
SPG7-202ENST00000341316 LCA10Q71F78 164 aa11.57□□□□□ -0.56
SPG7-202ENST00000341316 KRTAP13-3Q3SY46 172 aa11.55□□□□□ -0.56
SPG7-202ENST00000341316 SPTSSBQ8NFR3 76 aa11.51□□□□□ -0.57
SPG7-202ENST00000341316 C8orf87E5RJ46 101 aa11.5□□□□□ -0.57
SPG7-202ENST00000341316 PLA2G1BP04054 148 aaKnown RBP11.48□□□□□ -0.57
SPG7-202ENST00000341316 FAT1Q14517 4588 aa11.47□□□□□ -0.57
SPG7-202ENST00000341316 LINC00313P59037 77 aa11.47□□□□□ -0.57
SPG7-202ENST00000341316 CDC42SE1Q9NRR8 79 aa11.46□□□□□ -0.58
SPG7-202ENST00000341316 ATP11AUNQ6ZP68 121 aa11.45□□□□□ -0.58
SPG7-202ENST00000341316 PRR26Q8N8Z3 221 aa11.44□□□□□ -0.58
SPG7-202ENST00000341316 SEC61GP60059 68 aa11.43□□□□□ -0.58
SPG7-202ENST00000341316 RYR2Q92736 4967 aa11.42□□□□□ -0.58
SPG7-202ENST00000341316 KMT2CQ8NEZ4 4911 aaKnown RBP11.42□□□□□ -0.58
SPG7-202ENST00000341316 TYMSOSQ8TAI1 123 aa11.42□□□□□ -0.58
SPG7-202ENST00000341316 APOBP04114 4563 aaKnown RBP11.41□□□□□ -0.58
SPG7-202ENST00000341316 SPINK7P58062 85 aa11.41□□□□□ -0.58
SPG7-202ENST00000341316 KRTAP16-1A8MUX0 517 aa11.39□□□□□ -0.59
SPG7-202ENST00000341316 SMR3BP02814 79 aaPredicted RBP11.38□□□□□ -0.59
SPG7-202ENST00000341316 RETNLBQ9BQ08 111 aa11.37□□□□□ -0.59
SPG7-202ENST00000341316 ACYP2P14621 99 aa11.37□□□□□ -0.59
SPG7-202ENST00000341316 C4orf48Q5BLP8 95 aa11.35□□□□□ -0.59
SPG7-202ENST00000341316 A0A1B0GVY2 172 aa11.34□□□□□ -0.59
SPG7-202ENST00000341316 A6NN06 94 aa11.33□□□□□ -0.6
SPG7-202ENST00000341316 FAM229AH3BQW9 127 aa11.33□□□□□ -0.6
SPG7-202ENST00000341316 SPINK1P00995 79 aa11.32□□□□□ -0.6
SPG7-202ENST00000341316 KTN1-AS1Q86SY8 53 aa11.32□□□□□ -0.6
SPG7-202ENST00000341316 DMAC1Q96GE9 116 aa11.32□□□□□ -0.6
SPG7-202ENST00000341316 IGKV2-30P06310 120 aa11.28□□□□□ -0.6
SPG7-202ENST00000341316 LINC00304Q8N9R0 145 aa11.25□□□□□ -0.61
SPG7-202ENST00000341316 KRTAP10-4P60372 401 aaPredicted RBP11.25□□□□□ -0.61
SPG7-202ENST00000341316 PKHD1L1Q86WI1 4243 aa11.19□□□□□ -0.62
SPG7-202ENST00000341316 RPS29P62273 56 aaKnown RBP11.17□□□□□ -0.62
SPG7-202ENST00000341316 IGKV2D-30A0A075B6S6 120 aa11.14□□□□□ -0.63
SPG7-202ENST00000341316 A0A1B0GU69 56 aa11.12□□□□□ -0.63
SPG7-202ENST00000341316 C7orf65Q6ZTY9 151 aa11.12□□□□□ -0.63
SPG7-202ENST00000341316 RBM12B-AS1Q9P1G2 102 aa11.1□□□□□ -0.63
SPG7-202ENST00000341316 RYR3Q15413 4870 aa11.09□□□□□ -0.63
SPG7-202ENST00000341316 LRP1Q07954 4544 aaKnown RBP11.03□□□□□ -0.64
SPG7-202ENST00000341316 C9orf92A6NGG3 77 aa11.01□□□□□ -0.65
SPG7-202ENST00000341316 HSPG2P98160 4391 aa10.99□□□□□ -0.65
SPG7-202ENST00000341316 SPATA8Q6RVD6 105 aa10.98□□□□□ -0.65
SPG7-202ENST00000341316 MIR22HGQ0VDD5 57 aa10.93□□□□□ -0.66
SPG7-202ENST00000341316 UQCR11O14957 56 aa10.93□□□□□ -0.66
SPG7-202ENST00000341316 TNXBP22105 4242 aa10.92□□□□□ -0.66
SPG7-202ENST00000341316 C20orf166-AS1Q96NR2 134 aa10.92□□□□□ -0.66
SPG7-202ENST00000341316 A8MUU9 505 aa10.91□□□□□ -0.66
SPG7-202ENST00000341316 FLG2Q5D862 2391 aaPredicted RBP10.91□□□□□ -0.66
SPG7-202ENST00000341316 Q8N1X5 172 aa10.89□□□□□ -0.67
SPG7-202ENST00000341316 RYR1P21817 5038 aa10.88□□□□□ -0.67
SPG7-202ENST00000341316 FAT3Q8TDW7 4589 aa10.88□□□□□ -0.67
SPG7-202ENST00000341316 PRAC1Q96KF2 57 aa10.86□□□□□ -0.67
SPG7-202ENST00000341316 ADM2Q7Z4H4 148 aa10.83□□□□□ -0.68
SPG7-202ENST00000341316 KRTAP17-1Q9BYP8 105 aa10.83□□□□□ -0.68
SPG7-202ENST00000341316 KIAA1109Q2LD37 5005 aa10.81□□□□□ -0.68
SPG7-202ENST00000341316 Q5VSD8 79 aa10.79□□□□□ -0.68
SPG7-202ENST00000341316 KRTAP10-8P60410 259 aa10.78□□□□□ -0.68
SPG7-202ENST00000341316 MYCBP2O75592 4640 aa10.75□□□□□ -0.69
SPG7-202ENST00000341316 DMBT1Q9UGM3 2413 aaPredicted RBP10.73□□□□□ -0.69
SPG7-202ENST00000341316 KRTAP3-1Q9BYR8 98 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms