RNA–Protein interactions for RNA: ENST00000339570.9

SCARB1-202, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5 BASIC

Gene SCARB1, Length 3,329 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-202ENST00000339570 STARD9Q9P2P6 4700 aa9.62□□□□□ -0.87
SCARB1-202ENST00000339570 WWC2-AS2Q96NR7 200 aa9.62□□□□□ -0.87
SCARB1-202ENST00000339570 SPINK7P58062 85 aa9.61□□□□□ -0.87
SCARB1-202ENST00000339570 Q5W150 140 aa9.61□□□□□ -0.87
SCARB1-202ENST00000339570 Q6ZRN7 208 aaPredicted RBP9.6□□□□□ -0.87
SCARB1-202ENST00000339570 A0A087WTM6 91 aa9.59□□□□□ -0.87
SCARB1-202ENST00000339570 TP53AIP1Q9HCN2 124 aa9.59□□□□□ -0.87
SCARB1-202ENST00000339570 LOC101927531A0A1B0GV80 90 aa9.59□□□□□ -0.87
SCARB1-202ENST00000339570 DNAH8Q96JB1 4490 aa9.57□□□□□ -0.88
SCARB1-202ENST00000339570 IGLV5-52A0A0A0MRZ9 124 aa9.55□□□□□ -0.88
SCARB1-202ENST00000339570 Q75L30 129 aa9.55□□□□□ -0.88
SCARB1-202ENST00000339570 ZNF861PO60384 105 aa9.54□□□□□ -0.88
SCARB1-202ENST00000339570 HECTD4Q9Y4D8 3996 aa9.53□□□□□ -0.88
SCARB1-202ENST00000339570 ZNF706Q9Y5V0 76 aaPredicted RBP9.53□□□□□ -0.88
SCARB1-202ENST00000339570 Q6ZR54 194 aa9.51□□□□□ -0.89
SCARB1-202ENST00000339570 NUPR2A6NF83 97 aa9.5□□□□□ -0.89
SCARB1-202ENST00000339570 DNAH17Q9UFH2 4485 aa9.49□□□□□ -0.89
SCARB1-202ENST00000339570 PRKDCP78527 4128 aaKnown RBP9.48□□□□□ -0.89
SCARB1-202ENST00000339570 LINC00483Q53H64 154 aa9.48□□□□□ -0.89
SCARB1-202ENST00000339570 LY6G6CO95867 125 aa9.47□□□□□ -0.89
SCARB1-202ENST00000339570 ATP11AUNQ6ZP68 121 aa9.47□□□□□ -0.89
SCARB1-202ENST00000339570 ASB16-AS1Q495Z4 193 aa9.46□□□□□ -0.89
SCARB1-202ENST00000339570 LINC01558Q9Y6Z2 57 aa9.46□□□□□ -0.89
SCARB1-202ENST00000339570 KTN1-AS1Q86SY8 53 aa9.46□□□□□ -0.9
SCARB1-202ENST00000339570 CDC42SE1Q9NRR8 79 aa9.46□□□□□ -0.9
SCARB1-202ENST00000339570 DNAH2Q9P225 4427 aa9.45□□□□□ -0.9
SCARB1-202ENST00000339570 DNAH6Q9C0G6 4158 aa9.45□□□□□ -0.9
SCARB1-202ENST00000339570 IGKV2D-30A0A075B6S6 120 aa9.42□□□□□ -0.9
SCARB1-202ENST00000339570 IGKV2-30P06310 120 aa9.42□□□□□ -0.9
SCARB1-202ENST00000339570 RBM12B-AS1Q9P1G2 102 aa9.42□□□□□ -0.9
SCARB1-202ENST00000339570 IGLV7-43P04211 117 aa9.41□□□□□ -0.9
SCARB1-202ENST00000339570 VPS13DQ5THJ4 4388 aa9.4□□□□□ -0.9
SCARB1-202ENST00000339570 A6NN06 94 aa9.38□□□□□ -0.91
SCARB1-202ENST00000339570 PRAC1Q96KF2 57 aa9.38□□□□□ -0.91
SCARB1-202ENST00000339570 SPINK1P00995 79 aa9.38□□□□□ -0.91
SCARB1-202ENST00000339570 LINC00313P59037 77 aa9.38□□□□□ -0.91
SCARB1-202ENST00000339570 PLAC8Q9NZF1 115 aa9.38□□□□□ -0.91
SCARB1-202ENST00000339570 DNAH11Q96DT5 4516 aa9.37□□□□□ -0.91
SCARB1-202ENST00000339570 C1orf134Q5TEV5 83 aa9.37□□□□□ -0.91
SCARB1-202ENST00000339570 ACYP2P14621 99 aa9.36□□□□□ -0.91
SCARB1-202ENST00000339570 KRTAP10-2P60368 255 aa9.34□□□□□ -0.91
SCARB1-202ENST00000339570 J3QL48 77 aa9.33□□□□□ -0.92
SCARB1-202ENST00000339570 ADM2Q7Z4H4 148 aa9.33□□□□□ -0.92
SCARB1-202ENST00000339570 DYNC2H1Q8NCM8 4307 aaKnown RBP9.32□□□□□ -0.92
SCARB1-202ENST00000339570 A0A1B0GU69 56 aa9.32□□□□□ -0.92
SCARB1-202ENST00000339570 C7orf65Q6ZTY9 151 aa9.28□□□□□ -0.92
SCARB1-202ENST00000339570 KRTAP13-3Q3SY46 172 aa9.27□□□□□ -0.93
SCARB1-202ENST00000339570 ALMS1Q8TCU4 4167 aa9.26□□□□□ -0.93
SCARB1-202ENST00000339570 KRTAP13-2Q52LG2 175 aa9.25□□□□□ -0.93
SCARB1-202ENST00000339570 FAM229AH3BQW9 127 aa9.23□□□□□ -0.93
SCARB1-202ENST00000339570 Q8N1X5 172 aa9.23□□□□□ -0.93
SCARB1-202ENST00000339570 LRP1BQ9NZR2 4599 aa9.23□□□□□ -0.93
SCARB1-202ENST00000339570 SSBP3-AS1Q7Z2R9 100 aa9.21□□□□□ -0.93
SCARB1-202ENST00000339570 DMAC1Q96GE9 116 aa9.2□□□□□ -0.94
SCARB1-202ENST00000339570 DNHD1Q96M86 4753 aa9.2□□□□□ -0.94
SCARB1-202ENST00000339570 C8orf87E5RJ46 101 aa9.2□□□□□ -0.94
SCARB1-202ENST00000339570 DNAH5Q8TE73 4624 aa9.17□□□□□ -0.94
SCARB1-202ENST00000339570 KRTAP10-1P60331 282 aa9.16□□□□□ -0.94
SCARB1-202ENST00000339570 PLA2G1BP04054 148 aaKnown RBP9.14□□□□□ -0.95
SCARB1-202ENST00000339570 FLG2Q5D862 2391 aaPredicted RBP9.14□□□□□ -0.95
SCARB1-202ENST00000339570 MIR22HGQ0VDD5 57 aa9.14□□□□□ -0.95
SCARB1-202ENST00000339570 HYDINQ4G0P3 5121 aa9.11□□□□□ -0.95
SCARB1-202ENST00000339570 VPS13BQ7Z7G8 4022 aa9.11□□□□□ -0.95
SCARB1-202ENST00000339570 TYMSOSQ8TAI1 123 aa9.09□□□□□ -0.95
SCARB1-202ENST00000339570 C9orf92A6NGG3 77 aa9.09□□□□□ -0.95
SCARB1-202ENST00000339570 UQCR11O14957 56 aa9.08□□□□□ -0.96
SCARB1-202ENST00000339570 SMR3BP02814 79 aaPredicted RBP9.07□□□□□ -0.96
SCARB1-202ENST00000339570 KRTAP16-1A8MUX0 517 aa9.06□□□□□ -0.96
SCARB1-202ENST00000339570 FAT2Q9NYQ8 4349 aa9.05□□□□□ -0.96
SCARB1-202ENST00000339570 DMBT1Q9UGM3 2413 aaPredicted RBP9.04□□□□□ -0.96
SCARB1-202ENST00000339570 KRTAP1-4P0C5Y4 121 aa9.01□□□□□ -0.97
SCARB1-202ENST00000339570 SPATA8Q6RVD6 105 aa8.98□□□□□ -0.97
SCARB1-202ENST00000339570 CSAG1Q6PB30 78 aa8.97□□□□□ -0.97
SCARB1-202ENST00000339570 PKHD1P08F94 4074 aa8.96□□□□□ -0.97
SCARB1-202ENST00000339570 KRTAP3-3Q9BYR6 98 aa8.9□□□□□ -0.98
SCARB1-202ENST00000339570 KRTAP3-2Q9BYR7 98 aa8.9□□□□□ -0.98
SCARB1-202ENST00000339570 LCE2DQ5TA82 110 aaPredicted RBP8.9□□□□□ -0.99
SCARB1-202ENST00000339570 LINC00304Q8N9R0 145 aa8.89□□□□□ -0.99
SCARB1-202ENST00000339570 CRIPTQ9P021 101 aa8.88□□□□□ -0.99
SCARB1-202ENST00000339570 PKD1P98161 4303 aa8.88□□□□□ -0.99
SCARB1-202ENST00000339570 FAT1Q14517 4588 aa8.87□□□□□ -0.99
SCARB1-202ENST00000339570 LINC01554Q52M75 96 aa8.87□□□□□ -0.99
SCARB1-202ENST00000339570 Q6ZSA8 131 aa8.85□□□□□ -0.99
SCARB1-202ENST00000339570 H0YAA0 97 aa8.77□□□□□ -1.01
SCARB1-202ENST00000339570 A0A1B0GU33 70 aa8.72□□□□□ -1.01
SCARB1-202ENST00000339570 KRTAP3-1Q9BYR8 98 aa8.7□□□□□ -1.02
SCARB1-202ENST00000339570 DYNC1H1Q14204 4646 aaKnown RBP8.66□□□□□ -1.02
SCARB1-202ENST00000339570 MYCBP2O75592 4640 aa8.64□□□□□ -1.03
SCARB1-202ENST00000339570 A0A0D9SG42 100 aa8.64□□□□□ -1.03
SCARB1-202ENST00000339570 H1FX-AS1Q4G0G2 97 aa8.6□□□□□ -1.03
SCARB1-202ENST00000339570 A8MUU9 505 aa8.59□□□□□ -1.04
SCARB1-202ENST00000339570 SACSQ9NZJ4 4579 aa8.56□□□□□ -1.04
SCARB1-202ENST00000339570 LRP1Q07954 4544 aaKnown RBP8.56□□□□□ -1.04
SCARB1-202ENST00000339570 H3BS24 57 aa8.54□□□□□ -1.04
SCARB1-202ENST00000339570 C20orf166-AS1Q96NR2 134 aa8.54□□□□□ -1.04
SCARB1-202ENST00000339570 COX6B2Q6YFQ2 88 aa8.52□□□□□ -1.04
SCARB1-202ENST00000339570 KRTAP25-1Q3LHN0 102 aa8.49□□□□□ -1.05
SCARB1-202ENST00000339570 K7ERS5 55 aa8.49□□□□□ -1.05
SCARB1-202ENST00000339570 APOBP04114 4563 aaKnown RBP8.46□□□□□ -1.06
SCARB1-202ENST00000339570 HSPG2P98160 4391 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms