RNA–Protein interactions for RNA: ENST00000339488.8

PTCHD4-201, Transcript of patched domain containing 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PTCHD4, Length 2,850 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-201ENST00000339488 ANK2Q01484 3957 aa5.71□□□□□ -1.49
PTCHD4-201ENST00000339488 PLA2G2DQ9UNK4 145 aa5.71□□□□□ -1.5
PTCHD4-201ENST00000339488 SPART-AS1P0CW21 52 aa5.71□□□□□ -1.5
PTCHD4-201ENST00000339488 KRTAP10-3P60369 221 aa5.71□□□□□ -1.5
PTCHD4-201ENST00000339488 LINC00304Q8N9R0 145 aa5.71□□□□□ -1.5
PTCHD4-201ENST00000339488 TENM3Q9P273 2699 aa5.71□□□□□ -1.5
PTCHD4-201ENST00000339488 DNAH10Q8IVF4 4471 aa5.7□□□□□ -1.5
PTCHD4-201ENST00000339488 A0A1B0GVX0 72 aa5.7□□□□□ -1.5
PTCHD4-201ENST00000339488 KRTAP24-1Q3LI83 254 aa5.7□□□□□ -1.5
PTCHD4-201ENST00000339488 SPINK1P00995 79 aa5.69□□□□□ -1.5
PTCHD4-201ENST00000339488 SPINK6Q6UWN8 80 aa5.69□□□□□ -1.5
PTCHD4-201ENST00000339488 NOTCH1P46531 2555 aa5.68□□□□□ -1.5
PTCHD4-201ENST00000339488 TLX1NBP0CAT3 122 aa5.68□□□□□ -1.5
PTCHD4-201ENST00000339488 CMYA5Q8N3K9 4069 aa5.68□□□□□ -1.5
PTCHD4-201ENST00000339488 CDK2AP2O75956 126 aa5.67□□□□□ -1.5
PTCHD4-201ENST00000339488 SSBP3-AS1Q7Z2R9 100 aa5.67□□□□□ -1.5
PTCHD4-201ENST00000339488 MGAM2Q2M2H8 2515 aa5.67□□□□□ -1.5
PTCHD4-201ENST00000339488 LYSTQ99698 3801 aa5.66□□□□□ -1.5
PTCHD4-201ENST00000339488 CHTF8P0CG12 524 aa5.65□□□□□ -1.5
PTCHD4-201ENST00000339488 IGLV7-43P04211 117 aa5.65□□□□□ -1.5
PTCHD4-201ENST00000339488 KRTAP13-3Q3SY46 172 aa5.65□□□□□ -1.51
PTCHD4-201ENST00000339488 SPINT4Q6UDR6 99 aa5.65□□□□□ -1.51
PTCHD4-201ENST00000339488 H0YAA0 97 aa5.63□□□□□ -1.51
PTCHD4-201ENST00000339488 MEGF8Q7Z7M0 2845 aa5.62□□□□□ -1.51
PTCHD4-201ENST00000339488 ANAPC11Q9NYG5 84 aa5.61□□□□□ -1.51
PTCHD4-201ENST00000339488 LINC01556Q5JQF7 62 aa5.6□□□□□ -1.51
PTCHD4-201ENST00000339488 C20orf166-AS1Q96NR2 134 aa5.59□□□□□ -1.51
PTCHD4-201ENST00000339488 DNAH1Q9P2D7 4330 aa5.59□□□□□ -1.51
PTCHD4-201ENST00000339488 KRTAP16-1A8MUX0 517 aa5.58□□□□□ -1.52
PTCHD4-201ENST00000339488 SPRR1BP22528 89 aa5.57□□□□□ -1.52
PTCHD4-201ENST00000339488 Q6ZSA8 131 aa5.57□□□□□ -1.52
PTCHD4-201ENST00000339488 PSORS1C2Q9UIG4 136 aa5.57□□□□□ -1.52
PTCHD4-201ENST00000339488 IGKV2D-30A0A075B6S6 120 aa5.55□□□□□ -1.52
PTCHD4-201ENST00000339488 IGKV2-30P06310 120 aa5.55□□□□□ -1.52
PTCHD4-201ENST00000339488 DMBT1Q9UGM3 2413 aaPredicted RBP5.55□□□□□ -1.52
PTCHD4-201ENST00000339488 DNAH3Q8TD57 4116 aa5.55□□□□□ -1.52
PTCHD4-201ENST00000339488 A0A087WTM6 91 aa5.55□□□□□ -1.52
PTCHD4-201ENST00000339488 FRAS1Q86XX4 4008 aa5.55□□□□□ -1.52
PTCHD4-201ENST00000339488 TYMSOSQ8TAI1 123 aa5.52□□□□□ -1.53
PTCHD4-201ENST00000339488 Q8N1X5 172 aa5.51□□□□□ -1.53
PTCHD4-201ENST00000339488 C10orf95Q9H7T3 257 aa5.5□□□□□ -1.53
PTCHD4-201ENST00000339488 TGP01266 2768 aa5.5□□□□□ -1.53
PTCHD4-201ENST00000339488 PRKDCP78527 4128 aaKnown RBP5.48□□□□□ -1.53
PTCHD4-201ENST00000339488 PANO1I0J062 215 aa5.48□□□□□ -1.53
PTCHD4-201ENST00000339488 C14orf177Q52M58 125 aa5.48□□□□□ -1.53
PTCHD4-201ENST00000339488 LY6G6CO95867 125 aa5.47□□□□□ -1.53
PTCHD4-201ENST00000339488 TPRXLQ17RH7 258 aa5.46□□□□□ -1.53
PTCHD4-201ENST00000339488 NUPR2A6NF83 97 aa5.46□□□□□ -1.54
PTCHD4-201ENST00000339488 KRTAP10-11P60412 298 aa5.46□□□□□ -1.54
PTCHD4-201ENST00000339488 KRTAP15-1Q3LI76 137 aa5.45□□□□□ -1.54
PTCHD4-201ENST00000339488 DNAH9Q9NYC9 4486 aa5.45□□□□□ -1.54
PTCHD4-201ENST00000339488 STAB2Q8WWQ8 2551 aa5.45□□□□□ -1.54
PTCHD4-201ENST00000339488 H3BNG1 76 aa5.43□□□□□ -1.54
PTCHD4-201ENST00000339488 DNAH8Q96JB1 4490 aa5.43□□□□□ -1.54
PTCHD4-201ENST00000339488 A0A1B0GU33 70 aa5.43□□□□□ -1.54
PTCHD4-201ENST00000339488 FAM229AH3BQW9 127 aa5.43□□□□□ -1.54
PTCHD4-201ENST00000339488 FBN3Q75N90 2809 aa5.42□□□□□ -1.54
PTCHD4-201ENST00000339488 CIRBP-AS1Q8TBR5 109 aa5.42□□□□□ -1.54
PTCHD4-201ENST00000339488 WWC2-AS2Q96NR7 200 aa5.42□□□□□ -1.54
PTCHD4-201ENST00000339488 DNAH17Q9UFH2 4485 aa5.41□□□□□ -1.54
PTCHD4-201ENST00000339488 KRTAP13-1Q8IUC0 172 aa5.41□□□□□ -1.54
PTCHD4-201ENST00000339488 LUZP6Q538Z0 58 aa5.41□□□□□ -1.54
PTCHD4-201ENST00000339488 KRTAP1-5Q9BYS1 174 aa5.4□□□□□ -1.54
PTCHD4-201ENST00000339488 HUWE1Q7Z6Z7 4374 aaKnown RBP5.4□□□□□ -1.55
PTCHD4-201ENST00000339488 KRTAP21-3Q3LHN1 58 aa5.38□□□□□ -1.55
PTCHD4-201ENST00000339488 H1FX-AS1Q4G0G2 97 aa5.37□□□□□ -1.55
PTCHD4-201ENST00000339488 K7ERS5 55 aa5.34□□□□□ -1.55
PTCHD4-201ENST00000339488 A0A0D9SG42 100 aa5.32□□□□□ -1.56
PTCHD4-201ENST00000339488 NBDYA0A0U1RRE5 68 aa5.31□□□□□ -1.56
PTCHD4-201ENST00000339488 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.31□□□□□ -1.56
PTCHD4-201ENST00000339488 COX6B2Q6YFQ2 88 aa5.28□□□□□ -1.56
PTCHD4-201ENST00000339488 DNAH7Q8WXX0 4024 aa5.27□□□□□ -1.57
PTCHD4-201ENST00000339488 STARD9Q9P2P6 4700 aa5.26□□□□□ -1.57
PTCHD4-201ENST00000339488 VPS13DQ5THJ4 4388 aa5.25□□□□□ -1.57
PTCHD4-201ENST00000339488 KMT2AQ03164 3969 aa5.24□□□□□ -1.57
PTCHD4-201ENST00000339488 PLECQ15149 4684 aaKnown RBP5.22□□□□□ -1.57
PTCHD4-201ENST00000339488 KRTAP13-4Q3LI77 160 aa5.19□□□□□ -1.58
PTCHD4-201ENST00000339488 SPACA4Q8TDM5 124 aa5.19□□□□□ -1.58
PTCHD4-201ENST00000339488 APLNQ9ULZ1 77 aa5.18□□□□□ -1.58
PTCHD4-201ENST00000339488 RPL37P61927 97 aaKnown RBP5.18□□□□□ -1.58
PTCHD4-201ENST00000339488 DYNC2H1Q8NCM8 4307 aaKnown RBP5.18□□□□□ -1.58
PTCHD4-201ENST00000339488 KRTAP3-1Q9BYR8 98 aa5.17□□□□□ -1.58
PTCHD4-201ENST00000339488 UBE2DNLQ8IWF7 75 aa5.16□□□□□ -1.58
PTCHD4-201ENST00000339488 HECTD4Q9Y4D8 3996 aa5.13□□□□□ -1.59
PTCHD4-201ENST00000339488 HYDINQ4G0P3 5121 aa5.09□□□□□ -1.59
PTCHD4-201ENST00000339488 KMT2CQ8NEZ4 4911 aaKnown RBP5.09□□□□□ -1.59
PTCHD4-201ENST00000339488 KRTAP13-2Q52LG2 175 aa5.07□□□□□ -1.6
PTCHD4-201ENST00000339488 SACSQ9NZJ4 4579 aa5.06□□□□□ -1.6
PTCHD4-201ENST00000339488 KRTAP12-2P59991 146 aa5.06□□□□□ -1.6
PTCHD4-201ENST00000339488 DNAH2Q9P225 4427 aa5.05□□□□□ -1.6
PTCHD4-201ENST00000339488 S4R3F8 94 aa5.04□□□□□ -1.6
PTCHD4-201ENST00000339488 KRTAP10-6P60371 365 aaPredicted RBP5.03□□□□□ -1.6
PTCHD4-201ENST00000339488 DNAH6Q9C0G6 4158 aa5.02□□□□□ -1.61
PTCHD4-201ENST00000339488 C9orf92A6NGG3 77 aa5.02□□□□□ -1.61
PTCHD4-201ENST00000339488 DNAH11Q96DT5 4516 aa5.01□□□□□ -1.61
PTCHD4-201ENST00000339488 Q6ZRN7 208 aaPredicted RBP4.99□□□□□ -1.61
PTCHD4-201ENST00000339488 RYR2Q92736 4967 aa4.99□□□□□ -1.61
PTCHD4-201ENST00000339488 RYR3Q15413 4870 aa4.99□□□□□ -1.61
PTCHD4-201ENST00000339488 SEC61BP60468 96 aaKnown RBP4.98□□□□□ -1.61
PTCHD4-201ENST00000339488 KRTAP3-2Q9BYR7 98 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms