RNA–Protein interactions for RNA: ENST00000338074.6

EPB41L1-202, Transcript of erythrocyte membrane protein band 4.1 like 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene EPB41L1, Length 6,266 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPB41L1-202ENST00000338074 STAB2Q8WWQ8 2551 aa7.64□□□□□ -1.19
EPB41L1-202ENST00000338074 BAHCC1Q9P281 2608 aa7.64□□□□□ -1.19
EPB41L1-202ENST00000338074 NBEAQ8NFP9 2946 aa7.63□□□□□ -1.19
EPB41L1-202ENST00000338074 COL12A1Q99715 3063 aa7.63□□□□□ -1.19
EPB41L1-202ENST00000338074 ADGRG4Q8IZF6 3080 aa7.61□□□□□ -1.19
EPB41L1-202ENST00000338074 A0A1B0GVY2 172 aa7.61□□□□□ -1.19
EPB41L1-202ENST00000338074 ITPR2Q14571 2701 aa7.6□□□□□ -1.19
EPB41L1-202ENST00000338074 KRTAP25-1Q3LHN0 102 aa7.58□□□□□ -1.2
EPB41L1-202ENST00000338074 HIVEP1P15822 2718 aa7.58□□□□□ -1.2
EPB41L1-202ENST00000338074 A6NN06 94 aa7.57□□□□□ -1.2
EPB41L1-202ENST00000338074 NSD1Q96L73 2696 aaPredicted RBP7.55□□□□□ -1.2
EPB41L1-202ENST00000338074 UTP20O75691 2785 aaKnown RBP7.55□□□□□ -1.2
EPB41L1-202ENST00000338074 ITPR1Q14643 2758 aa7.54□□□□□ -1.2
EPB41L1-202ENST00000338074 APCP25054 2843 aa7.53□□□□□ -1.2
EPB41L1-202ENST00000338074 KRTAP13-1Q8IUC0 172 aa7.52□□□□□ -1.21
EPB41L1-202ENST00000338074 NDUFAF8A1L188 74 aa7.52□□□□□ -1.21
EPB41L1-202ENST00000338074 C10orf95Q9H7T3 257 aa7.51□□□□□ -1.21
EPB41L1-202ENST00000338074 WDFY3Q8IZQ1 3526 aa7.5□□□□□ -1.21
EPB41L1-202ENST00000338074 ASB16-AS1Q495Z4 193 aa7.5□□□□□ -1.21
EPB41L1-202ENST00000338074 ZZEF1O43149 2961 aa7.47□□□□□ -1.21
EPB41L1-202ENST00000338074 KRTAP16-1A8MUX0 517 aa7.45□□□□□ -1.22
EPB41L1-202ENST00000338074 ASPMQ8IZT6 3477 aa7.45□□□□□ -1.22
EPB41L1-202ENST00000338074 RPS29P62273 56 aaKnown RBP7.43□□□□□ -1.22
EPB41L1-202ENST00000338074 KMT2BQ9UMN6 2715 aaPredicted RBP7.39□□□□□ -1.23
EPB41L1-202ENST00000338074 KRTAP10-8P60410 259 aa7.38□□□□□ -1.23
EPB41L1-202ENST00000338074 TNP1P09430 55 aa7.38□□□□□ -1.23
EPB41L1-202ENST00000338074 CELSR2Q9HCU4 2923 aa7.35□□□□□ -1.23
EPB41L1-202ENST00000338074 LOC400499M0QZD8 3231 aa7.34□□□□□ -1.23
EPB41L1-202ENST00000338074 DMXL1Q9Y485 3027 aa7.32□□□□□ -1.24
EPB41L1-202ENST00000338074 XP32Q5T750 250 aa7.31□□□□□ -1.24
EPB41L1-202ENST00000338074 DCHS1Q96JQ0 3298 aa7.31□□□□□ -1.24
EPB41L1-202ENST00000338074 FLNCQ14315 2725 aa7.29□□□□□ -1.24
EPB41L1-202ENST00000338074 ZFHX4Q86UP3 3567 aa7.29□□□□□ -1.24
EPB41L1-202ENST00000338074 KRTAP1-4P0C5Y4 121 aa7.25□□□□□ -1.25
EPB41L1-202ENST00000338074 RELNP78509 3460 aa7.24□□□□□ -1.25
EPB41L1-202ENST00000338074 DCHS2Q6V1P9 2916 aa7.23□□□□□ -1.25
EPB41L1-202ENST00000338074 TNRC18O15417 2968 aaPredicted RBP7.22□□□□□ -1.25
EPB41L1-202ENST00000338074 KRTAP10-10P60014 251 aa7.19□□□□□ -1.26
EPB41L1-202ENST00000338074 CSMD1Q96PZ7 3565 aa7.19□□□□□ -1.26
EPB41L1-202ENST00000338074 TENM4Q6N022 2769 aa7.18□□□□□ -1.26
EPB41L1-202ENST00000338074 H0YAA0 97 aa7.18□□□□□ -1.26
EPB41L1-202ENST00000338074 LAMA5O15230 3695 aa7.14□□□□□ -1.27
EPB41L1-202ENST00000338074 NBPF19A0A087WUL8 3843 aa7.11□□□□□ -1.27
EPB41L1-202ENST00000338074 ZANQ9Y493 2812 aa7.1□□□□□ -1.27
EPB41L1-202ENST00000338074 FBN2P35556 2912 aa7.1□□□□□ -1.27
EPB41L1-202ENST00000338074 P0C880 135 aa7.1□□□□□ -1.27
EPB41L1-202ENST00000338074 HRNRQ86YZ3 2850 aaPredicted RBP7.07□□□□□ -1.28
EPB41L1-202ENST00000338074 CELSR1Q9NYQ6 3014 aa7.01□□□□□ -1.29
EPB41L1-202ENST00000338074 TENM2Q9NT68 2774 aa6.99□□□□□ -1.29
EPB41L1-202ENST00000338074 DMDP11532 3685 aa6.98□□□□□ -1.29
EPB41L1-202ENST00000338074 TPRXLQ17RH7 258 aa6.97□□□□□ -1.29
EPB41L1-202ENST00000338074 KRTAP21-3Q3LHN1 58 aa6.97□□□□□ -1.29
EPB41L1-202ENST00000338074 NF1P21359 2839 aa6.97□□□□□ -1.29
EPB41L1-202ENST00000338074 TENM1Q9UKZ4 2725 aa6.96□□□□□ -1.29
EPB41L1-202ENST00000338074 KRTAP13-3Q3SY46 172 aa6.96□□□□□ -1.3
EPB41L1-202ENST00000338074 NIPBLQ6KC79 2804 aaeCLIP6.95□□□□□ -1.3
EPB41L1-202ENST00000338074 SMG1Q96Q15 3661 aaKnown RBP6.95□□□□□ -1.3
EPB41L1-202ENST00000338074 PP632Q6XCG6 107 aa6.91□□□□□ -1.3
EPB41L1-202ENST00000338074 SVEP1Q4LDE5 3571 aa6.89□□□□□ -1.31
EPB41L1-202ENST00000338074 KRTAP12-2P59991 146 aa6.86□□□□□ -1.31
EPB41L1-202ENST00000338074 CUBNO60494 3623 aa6.85□□□□□ -1.31
EPB41L1-202ENST00000338074 TGP01266 2768 aa6.84□□□□□ -1.31
EPB41L1-202ENST00000338074 PRO2289Q9P1D8 64 aa6.84□□□□□ -1.31
EPB41L1-202ENST00000338074 PKD1L1Q8TDX9 2849 aa6.82□□□□□ -1.32
EPB41L1-202ENST00000338074 VWFP04275 2813 aa6.81□□□□□ -1.32
EPB41L1-202ENST00000338074 SPENQ96T58 3664 aaKnown RBP6.79□□□□□ -1.32
EPB41L1-202ENST00000338074 TENM3Q9P273 2699 aa6.76□□□□□ -1.33
EPB41L1-202ENST00000338074 MXRA5Q9NR99 2828 aa6.75□□□□□ -1.33
EPB41L1-202ENST00000338074 ZFHX3Q15911 3703 aa6.74□□□□□ -1.33
EPB41L1-202ENST00000338074 CSMD2Q7Z408 3487 aa6.7□□□□□ -1.34
EPB41L1-202ENST00000338074 KRTAP12-1P59990 96 aa6.59□□□□□ -1.35
EPB41L1-202ENST00000338074 KRTAP3-1Q9BYR8 98 aa6.57□□□□□ -1.36
EPB41L1-202ENST00000338074 PDZD2O15018 2839 aa6.56□□□□□ -1.36
EPB41L1-202ENST00000338074 MUC3AQ02505 3323 aa6.55□□□□□ -1.36
EPB41L1-202ENST00000338074 ANK3Q12955 4377 aaKnown RBP6.53□□□□□ -1.36
EPB41L1-202ENST00000338074 KRTAP13-4Q3LI77 160 aa6.53□□□□□ -1.36
EPB41L1-202ENST00000338074 CRCT1Q9UGL9 99 aa6.5□□□□□ -1.37
EPB41L1-202ENST00000338074 FBN1P35555 2871 aaKnown RBP6.49□□□□□ -1.37
EPB41L1-202ENST00000338074 KRTAP15-1Q3LI76 137 aa6.48□□□□□ -1.37
EPB41L1-202ENST00000338074 TRRAPQ9Y4A5 3859 aa6.43□□□□□ -1.38
EPB41L1-202ENST00000338074 VPS13CQ709C8 3753 aa6.36□□□□□ -1.39
EPB41L1-202ENST00000338074 SRRM2Q9UQ35 2752 aaKnown RBP6.35□□□□□ -1.39
EPB41L1-202ENST00000338074 BSNQ9UPA5 3926 aa6.32□□□□□ -1.4
EPB41L1-202ENST00000338074 KRTAP10-6P60371 365 aaPredicted RBP6.32□□□□□ -1.4
EPB41L1-202ENST00000338074 FBN3Q75N90 2809 aa6.3□□□□□ -1.4
EPB41L1-202ENST00000338074 CSMD3Q7Z407 3707 aa6.3□□□□□ -1.4
EPB41L1-202ENST00000338074 KRTAP4-5Q9BYR2 181 aa6.3□□□□□ -1.4
EPB41L1-202ENST00000338074 OTOGQ6ZRI0 2925 aa6.28□□□□□ -1.4
EPB41L1-202ENST00000338074 MEGF8Q7Z7M0 2845 aa6.26□□□□□ -1.41
EPB41L1-202ENST00000338074 HUWE1Q7Z6Z7 4374 aaKnown RBP6.25□□□□□ -1.41
EPB41L1-202ENST00000338074 COL7A1Q02388 2944 aa6.19□□□□□ -1.42
EPB41L1-202ENST00000338074 MT1HL1P0DM35 61 aa6.18□□□□□ -1.42
EPB41L1-202ENST00000338074 KRTAP10-12P60413 245 aa6.11□□□□□ -1.43
EPB41L1-202ENST00000338074 KRTAP3-3Q9BYR6 98 aa6.11□□□□□ -1.43
EPB41L1-202ENST00000338074 KRTAP3-2Q9BYR7 98 aa6.07□□□□□ -1.44
EPB41L1-202ENST00000338074 LORP23490 312 aaPredicted RBP6.01□□□□□ -1.45
EPB41L1-202ENST00000338074 LCE3AQ5TA76 89 aa5.98□□□□□ -1.45
EPB41L1-202ENST00000338074 AKAP9Q99996 3911 aa5.96□□□□□ -1.46
EPB41L1-202ENST00000338074 ALMS1Q8TCU4 4167 aa5.92□□□□□ -1.46
EPB41L1-202ENST00000338074 KRTAP12-3P60328 96 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms