RNA–Protein interactions for RNA: ENST00000333039.2

NPTXR-201, Transcript of neuronal pentraxin receptor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NPTXR, Length 5,784 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPTXR-201ENST00000333039 XP32Q5T750 250 aa11.72□□□□□ -0.53
NPTXR-201ENST00000333039 VCANP13611 3396 aa11.7□□□□□ -0.54
NPTXR-201ENST00000333039 LAMA1P25391 3075 aa11.68□□□□□ -0.54
NPTXR-201ENST00000333039 UTP20O75691 2785 aaKnown RBP11.68□□□□□ -0.54
NPTXR-201ENST00000333039 COL6A3P12111 3177 aa11.66□□□□□ -0.54
NPTXR-201ENST00000333039 APCP25054 2843 aa11.66□□□□□ -0.54
NPTXR-201ENST00000333039 C10orf95Q9H7T3 257 aa11.62□□□□□ -0.55
NPTXR-201ENST00000333039 TACC2O95359 2948 aa11.62□□□□□ -0.55
NPTXR-201ENST00000333039 COL12A1Q99715 3063 aa11.59□□□□□ -0.55
NPTXR-201ENST00000333039 FLNCQ14315 2725 aa11.58□□□□□ -0.56
NPTXR-201ENST00000333039 ADGRG4Q8IZF6 3080 aa11.55□□□□□ -0.56
NPTXR-201ENST00000333039 HIVEP1P15822 2718 aa11.54□□□□□ -0.56
NPTXR-201ENST00000333039 BOD1L1Q8NFC6 3051 aa11.53□□□□□ -0.56
NPTXR-201ENST00000333039 NBEAQ8NFP9 2946 aa11.51□□□□□ -0.57
NPTXR-201ENST00000333039 A0A1B0GVY2 172 aa11.5□□□□□ -0.57
NPTXR-201ENST00000333039 H0YAA0 97 aa11.5□□□□□ -0.57
NPTXR-201ENST00000333039 DMXL2Q8TDJ6 3036 aa11.49□□□□□ -0.57
NPTXR-201ENST00000333039 FRYLO94915 3013 aa11.48□□□□□ -0.57
NPTXR-201ENST00000333039 PP632Q6XCG6 107 aa11.47□□□□□ -0.57
NPTXR-201ENST00000333039 KRTAP10-8P60410 259 aa11.45□□□□□ -0.58
NPTXR-201ENST00000333039 ASH1LQ9NR48 2969 aaKnown RBP11.45□□□□□ -0.58
NPTXR-201ENST00000333039 TPRXLQ17RH7 258 aa11.44□□□□□ -0.58
NPTXR-201ENST00000333039 EYSQ5T1H1 3165 aa11.4□□□□□ -0.58
NPTXR-201ENST00000333039 SPTBN5Q9NRC6 3674 aaKnown RBP11.38□□□□□ -0.59
NPTXR-201ENST00000333039 CRYBG3Q68DQ2 2970 aa11.36□□□□□ -0.59
NPTXR-201ENST00000333039 CFAP47Q6ZTR5 3102 aa11.33□□□□□ -0.6
NPTXR-201ENST00000333039 NIPBLQ6KC79 2804 aaeCLIP11.3□□□□□ -0.6
NPTXR-201ENST00000333039 KRTAP13-3Q3SY46 172 aa11.3□□□□□ -0.6
NPTXR-201ENST00000333039 ZZEF1O43149 2961 aa11.28□□□□□ -0.6
NPTXR-201ENST00000333039 USP34Q70CQ2 3546 aa11.25□□□□□ -0.61
NPTXR-201ENST00000333039 REV3LO60673 3130 aa11.24□□□□□ -0.61
NPTXR-201ENST00000333039 TENM4Q6N022 2769 aa11.23□□□□□ -0.61
NPTXR-201ENST00000333039 CELSR2Q9HCU4 2923 aa11.23□□□□□ -0.61
NPTXR-201ENST00000333039 P0C880 135 aa11.22□□□□□ -0.61
NPTXR-201ENST00000333039 KRTAP10-10P60014 251 aa11.2□□□□□ -0.62
NPTXR-201ENST00000333039 HRNRQ86YZ3 2850 aaPredicted RBP11.18□□□□□ -0.62
NPTXR-201ENST00000333039 DCHS2Q6V1P9 2916 aa11.13□□□□□ -0.63
NPTXR-201ENST00000333039 TNRC18O15417 2968 aaPredicted RBP11.12□□□□□ -0.63
NPTXR-201ENST00000333039 ZANQ9Y493 2812 aa11.06□□□□□ -0.64
NPTXR-201ENST00000333039 SPEGQ15772 3267 aa11.04□□□□□ -0.64
NPTXR-201ENST00000333039 PRO2289Q9P1D8 64 aa11.04□□□□□ -0.64
NPTXR-201ENST00000333039 DMXL1Q9Y485 3027 aa10.98□□□□□ -0.65
NPTXR-201ENST00000333039 FBN2P35556 2912 aa10.86□□□□□ -0.67
NPTXR-201ENST00000333039 KRTAP12-2P59991 146 aa10.85□□□□□ -0.67
NPTXR-201ENST00000333039 NF1P21359 2839 aa10.81□□□□□ -0.68
NPTXR-201ENST00000333039 LOC400499M0QZD8 3231 aa10.78□□□□□ -0.68
NPTXR-201ENST00000333039 TENM2Q9NT68 2774 aa10.77□□□□□ -0.69
NPTXR-201ENST00000333039 TENM1Q9UKZ4 2725 aa10.73□□□□□ -0.69
NPTXR-201ENST00000333039 CELSR1Q9NYQ6 3014 aa10.71□□□□□ -0.69
NPTXR-201ENST00000333039 TGP01266 2768 aa10.71□□□□□ -0.69
NPTXR-201ENST00000333039 KRTAP13-4Q3LI77 160 aa10.63□□□□□ -0.71
NPTXR-201ENST00000333039 KRTAP12-1P59990 96 aa10.62□□□□□ -0.71
NPTXR-201ENST00000333039 MYO15AQ9UKN7 3530 aa10.61□□□□□ -0.71
NPTXR-201ENST00000333039 KRTAP3-1Q9BYR8 98 aa10.61□□□□□ -0.71
NPTXR-201ENST00000333039 TENM3Q9P273 2699 aa10.56□□□□□ -0.72
NPTXR-201ENST00000333039 WDFY3Q8IZQ1 3526 aa10.55□□□□□ -0.72
NPTXR-201ENST00000333039 MXRA5Q9NR99 2828 aa10.48□□□□□ -0.73
NPTXR-201ENST00000333039 RELNP78509 3460 aa10.47□□□□□ -0.73
NPTXR-201ENST00000333039 ASPMQ8IZT6 3477 aa10.44□□□□□ -0.74
NPTXR-201ENST00000333039 PDZD2O15018 2839 aa10.35□□□□□ -0.75
NPTXR-201ENST00000333039 NBPF19A0A087WUL8 3843 aa10.3□□□□□ -0.76
NPTXR-201ENST00000333039 KRTAP10-6P60371 365 aaPredicted RBP10.29□□□□□ -0.76
NPTXR-201ENST00000333039 ZFHX4Q86UP3 3567 aa10.28□□□□□ -0.76
NPTXR-201ENST00000333039 ANK3Q12955 4377 aaKnown RBP10.26□□□□□ -0.77
NPTXR-201ENST00000333039 PKD1L1Q8TDX9 2849 aa10.22□□□□□ -0.77
NPTXR-201ENST00000333039 DCHS1Q96JQ0 3298 aa10.2□□□□□ -0.78
NPTXR-201ENST00000333039 KRTAP15-1Q3LI76 137 aa10.19□□□□□ -0.78
NPTXR-201ENST00000333039 CSMD1Q96PZ7 3565 aa10.15□□□□□ -0.78
NPTXR-201ENST00000333039 VWFP04275 2813 aa10.15□□□□□ -0.79
NPTXR-201ENST00000333039 LAMA5O15230 3695 aa10.12□□□□□ -0.79
NPTXR-201ENST00000333039 MT1HL1P0DM35 61 aa10.04□□□□□ -0.8
NPTXR-201ENST00000333039 OTOGQ6ZRI0 2925 aa9.99□□□□□ -0.81
NPTXR-201ENST00000333039 SMG1Q96Q15 3661 aaKnown RBP9.97□□□□□ -0.81
NPTXR-201ENST00000333039 KRTAP3-3Q9BYR6 98 aa9.93□□□□□ -0.82
NPTXR-201ENST00000333039 KRTAP3-2Q9BYR7 98 aa9.92□□□□□ -0.82
NPTXR-201ENST00000333039 DMDP11532 3685 aa9.87□□□□□ -0.83
NPTXR-201ENST00000333039 FBN1P35555 2871 aaKnown RBP9.85□□□□□ -0.83
NPTXR-201ENST00000333039 HUWE1Q7Z6Z7 4374 aaKnown RBP9.79□□□□□ -0.84
NPTXR-201ENST00000333039 KRTAP10-4P60372 401 aaPredicted RBP9.78□□□□□ -0.84
NPTXR-201ENST00000333039 FBN3Q75N90 2809 aa9.77□□□□□ -0.85
NPTXR-201ENST00000333039 ZFHX3Q15911 3703 aa9.76□□□□□ -0.85
NPTXR-201ENST00000333039 KRTAP10-12P60413 245 aa9.75□□□□□ -0.85
NPTXR-201ENST00000333039 SVEP1Q4LDE5 3571 aa9.71□□□□□ -0.86
NPTXR-201ENST00000333039 MEGF8Q7Z7M0 2845 aa9.69□□□□□ -0.86
NPTXR-201ENST00000333039 KRTAP4-5Q9BYR2 181 aa9.69□□□□□ -0.86
NPTXR-201ENST00000333039 TRRAPQ9Y4A5 3859 aa9.65□□□□□ -0.87
NPTXR-201ENST00000333039 ALMS1Q8TCU4 4167 aa9.65□□□□□ -0.87
NPTXR-201ENST00000333039 INE1O15225 51 aa9.58□□□□□ -0.88
NPTXR-201ENST00000333039 SPENQ96T58 3664 aaKnown RBP9.58□□□□□ -0.88
NPTXR-201ENST00000333039 CSMD2Q7Z408 3487 aa9.58□□□□□ -0.88
NPTXR-201ENST00000333039 CRCT1Q9UGL9 99 aa9.56□□□□□ -0.88
NPTXR-201ENST00000333039 KRTAP12-3P60328 96 aa9.47□□□□□ -0.89
NPTXR-201ENST00000333039 BSNQ9UPA5 3926 aa9.45□□□□□ -0.9
NPTXR-201ENST00000333039 SRRM2Q9UQ35 2752 aaKnown RBP9.43□□□□□ -0.9
NPTXR-201ENST00000333039 LCE3AQ5TA76 89 aa9.42□□□□□ -0.9
NPTXR-201ENST00000333039 KRTAP23-1A1A580 65 aa9.4□□□□□ -0.9
NPTXR-201ENST00000333039 COL7A1Q02388 2944 aa9.39□□□□□ -0.91
NPTXR-201ENST00000333039 LORP23490 312 aaPredicted RBP9.37□□□□□ -0.91
NPTXR-201ENST00000333039 MUC3AQ02505 3323 aa9.32□□□□□ -0.92
NPTXR-201ENST00000333039 CUBNO60494 3623 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 387 ms