RNA–Protein interactions for RNA: ENST00000332858.10

TUBA1B-201, Transcript of tubulin alpha 1b, humanhuman

TSL 1 (best)

Gene TUBA1B, Length 3,198 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1B-201ENST00000332858 ZNF861PO60384 105 aa8.01□□□□□ -1.13
TUBA1B-201ENST00000332858 A0A087X002 238 aa8□□□□□ -1.13
TUBA1B-201ENST00000332858 NOTCH2NLQ7Z3S9 236 aa8□□□□□ -1.13
TUBA1B-201ENST00000332858 HYDINQ4G0P3 5121 aa8□□□□□ -1.13
TUBA1B-201ENST00000332858 LRP1BQ9NZR2 4599 aa7.99□□□□□ -1.13
TUBA1B-201ENST00000332858 IGHV6-1A0A0B4J1U7 121 aa7.99□□□□□ -1.13
TUBA1B-201ENST00000332858 NDUFS5O43920 106 aa7.99□□□□□ -1.13
TUBA1B-201ENST00000332858 ASB16-AS1Q495Z4 193 aa7.98□□□□□ -1.13
TUBA1B-201ENST00000332858 C8orf17Q9NRJ1 99 aa7.98□□□□□ -1.13
TUBA1B-201ENST00000332858 ZNF706Q9Y5V0 76 aaPredicted RBP7.96□□□□□ -1.13
TUBA1B-201ENST00000332858 A8MU10 97 aa7.96□□□□□ -1.14
TUBA1B-201ENST00000332858 H3BPC8 53 aa7.95□□□□□ -1.14
TUBA1B-201ENST00000332858 PSPHP1O15172 72 aa7.95□□□□□ -1.14
TUBA1B-201ENST00000332858 C1orf134Q5TEV5 83 aa7.95□□□□□ -1.14
TUBA1B-201ENST00000332858 Q1T7F1 81 aa7.95□□□□□ -1.14
TUBA1B-201ENST00000332858 A0A1B0GVX0 72 aa7.94□□□□□ -1.14
TUBA1B-201ENST00000332858 PCOTHQ58A44 107 aa7.94□□□□□ -1.14
TUBA1B-201ENST00000332858 PKD1P98161 4303 aa7.94□□□□□ -1.14
TUBA1B-201ENST00000332858 LY6G6CO95867 125 aa7.93□□□□□ -1.14
TUBA1B-201ENST00000332858 SPANXA2-OT1Q8N9U9 137 aa7.93□□□□□ -1.14
TUBA1B-201ENST00000332858 SPINK6Q6UWN8 80 aa7.92□□□□□ -1.14
TUBA1B-201ENST00000332858 FAT2Q9NYQ8 4349 aa7.92□□□□□ -1.14
TUBA1B-201ENST00000332858 IGLV7-43P04211 117 aa7.92□□□□□ -1.14
TUBA1B-201ENST00000332858 KRTAP10-2P60368 255 aa7.91□□□□□ -1.14
TUBA1B-201ENST00000332858 CIRBP-AS1Q8TBR5 109 aa7.9□□□□□ -1.14
TUBA1B-201ENST00000332858 VPS13BQ7Z7G8 4022 aa7.89□□□□□ -1.15
TUBA1B-201ENST00000332858 A8MUN3 132 aa7.89□□□□□ -1.15
TUBA1B-201ENST00000332858 CDK2AP2O75956 126 aa7.88□□□□□ -1.15
TUBA1B-201ENST00000332858 SPTSSBQ8NFR3 76 aa7.88□□□□□ -1.15
TUBA1B-201ENST00000332858 MRPL34Q9BQ48 92 aaKnown RBP7.88□□□□□ -1.15
TUBA1B-201ENST00000332858 TP53AIP1Q9HCN2 124 aa7.88□□□□□ -1.15
TUBA1B-201ENST00000332858 IGLV7-46A0A075B6I9 117 aa7.86□□□□□ -1.15
TUBA1B-201ENST00000332858 SEC61BP60468 96 aaKnown RBP7.86□□□□□ -1.15
TUBA1B-201ENST00000332858 FAM229AH3BQW9 127 aa7.84□□□□□ -1.15
TUBA1B-201ENST00000332858 Q5W150 140 aa7.84□□□□□ -1.15
TUBA1B-201ENST00000332858 Q8N9P0 234 aaPredicted RBP7.84□□□□□ -1.15
TUBA1B-201ENST00000332858 COA5Q86WW8 74 aa7.83□□□□□ -1.16
TUBA1B-201ENST00000332858 LINC00313P59037 77 aa7.82□□□□□ -1.16
TUBA1B-201ENST00000332858 PKHD1P08F94 4074 aa7.81□□□□□ -1.16
TUBA1B-201ENST00000332858 Q5VV11 94 aa7.8□□□□□ -1.16
TUBA1B-201ENST00000332858 KRTAP10-1P60331 282 aa7.79□□□□□ -1.16
TUBA1B-201ENST00000332858 KRTAP13-2Q52LG2 175 aa7.78□□□□□ -1.16
TUBA1B-201ENST00000332858 KRTAP13-3Q3SY46 172 aa7.77□□□□□ -1.17
TUBA1B-201ENST00000332858 LCA10Q71F78 164 aa7.76□□□□□ -1.17
TUBA1B-201ENST00000332858 SSBP3-AS1Q7Z2R9 100 aa7.76□□□□□ -1.17
TUBA1B-201ENST00000332858 PRR15LQ9BU68 103 aa7.75□□□□□ -1.17
TUBA1B-201ENST00000332858 HRES1P13985 223 aa7.74□□□□□ -1.17
TUBA1B-201ENST00000332858 Q6ZSA8 131 aa7.73□□□□□ -1.17
TUBA1B-201ENST00000332858 C7orf65Q6ZTY9 151 aa7.73□□□□□ -1.17
TUBA1B-201ENST00000332858 RETNLBQ9BQ08 111 aa7.73□□□□□ -1.17
TUBA1B-201ENST00000332858 LIMD2Q9BT23 127 aa7.73□□□□□ -1.17
TUBA1B-201ENST00000332858 SPAG11AQ6PDA7 123 aa7.72□□□□□ -1.17
TUBA1B-201ENST00000332858 A6NN06 94 aa7.71□□□□□ -1.17
TUBA1B-201ENST00000332858 CHKB-CPT1BH3BT56 60 aa7.71□□□□□ -1.17
TUBA1B-201ENST00000332858 SACSQ9NZJ4 4579 aa7.69□□□□□ -1.18
TUBA1B-201ENST00000332858 LOC101927531A0A1B0GV80 90 aa7.69□□□□□ -1.18
TUBA1B-201ENST00000332858 KRTAP1-4P0C5Y4 121 aa7.69□□□□□ -1.18
TUBA1B-201ENST00000332858 ATP11AUNQ6ZP68 121 aa7.68□□□□□ -1.18
TUBA1B-201ENST00000332858 FAT1Q14517 4588 aa7.63□□□□□ -1.19
TUBA1B-201ENST00000332858 KRTAP16-1A8MUX0 517 aa7.62□□□□□ -1.19
TUBA1B-201ENST00000332858 LINC01554Q52M75 96 aa7.62□□□□□ -1.19
TUBA1B-201ENST00000332858 LINC01558Q9Y6Z2 57 aa7.62□□□□□ -1.19
TUBA1B-201ENST00000332858 DYNC1H1Q14204 4646 aaKnown RBP7.62□□□□□ -1.19
TUBA1B-201ENST00000332858 PRAC1Q96KF2 57 aa7.61□□□□□ -1.19
TUBA1B-201ENST00000332858 A6NED7 52 aa7.6□□□□□ -1.19
TUBA1B-201ENST00000332858 IGKV2-30P06310 120 aa7.56□□□□□ -1.2
TUBA1B-201ENST00000332858 SPINK7P58062 85 aa7.56□□□□□ -1.2
TUBA1B-201ENST00000332858 ACYP2P14621 99 aa7.55□□□□□ -1.2
TUBA1B-201ENST00000332858 TYMSOSQ8TAI1 123 aa7.55□□□□□ -1.2
TUBA1B-201ENST00000332858 DMAC1Q96GE9 116 aa7.54□□□□□ -1.2
TUBA1B-201ENST00000332858 IGKV2D-30A0A075B6S6 120 aa7.52□□□□□ -1.21
TUBA1B-201ENST00000332858 APOBP04114 4563 aaKnown RBP7.51□□□□□ -1.21
TUBA1B-201ENST00000332858 SMR3BP02814 79 aaPredicted RBP7.5□□□□□ -1.21
TUBA1B-201ENST00000332858 CDC42SE1Q9NRR8 79 aa7.49□□□□□ -1.21
TUBA1B-201ENST00000332858 ADM2Q7Z4H4 148 aa7.48□□□□□ -1.21
TUBA1B-201ENST00000332858 SPINK1P00995 79 aa7.47□□□□□ -1.21
TUBA1B-201ENST00000332858 PKHD1L1Q86WI1 4243 aa7.45□□□□□ -1.22
TUBA1B-201ENST00000332858 KMT2CQ8NEZ4 4911 aaKnown RBP7.43□□□□□ -1.22
TUBA1B-201ENST00000332858 LINC00304Q8N9R0 145 aa7.43□□□□□ -1.22
TUBA1B-201ENST00000332858 RYR2Q92736 4967 aa7.4□□□□□ -1.23
TUBA1B-201ENST00000332858 Q8N1X5 172 aa7.37□□□□□ -1.23
TUBA1B-201ENST00000332858 C9orf92A6NGG3 77 aa7.36□□□□□ -1.23
TUBA1B-201ENST00000332858 A0A1B0GU69 56 aa7.36□□□□□ -1.23
TUBA1B-201ENST00000332858 LRP1Q07954 4544 aaKnown RBP7.35□□□□□ -1.23
TUBA1B-201ENST00000332858 KRTAP10-4P60372 401 aaPredicted RBP7.34□□□□□ -1.23
TUBA1B-201ENST00000332858 A0A1B0GVY2 172 aa7.32□□□□□ -1.24
TUBA1B-201ENST00000332858 RPS29P62273 56 aaKnown RBP7.31□□□□□ -1.24
TUBA1B-201ENST00000332858 KRTAP21-3Q3LHN1 58 aa7.28□□□□□ -1.24
TUBA1B-201ENST00000332858 FLG2Q5D862 2391 aaPredicted RBP7.27□□□□□ -1.25
TUBA1B-201ENST00000332858 FAT3Q8TDW7 4589 aa7.25□□□□□ -1.25
TUBA1B-201ENST00000332858 TNXBP22105 4242 aa7.25□□□□□ -1.25
TUBA1B-201ENST00000332858 MYCBP2O75592 4640 aa7.24□□□□□ -1.25
TUBA1B-201ENST00000332858 A8MUU9 505 aa7.24□□□□□ -1.25
TUBA1B-201ENST00000332858 HSPG2P98160 4391 aa7.24□□□□□ -1.25
TUBA1B-201ENST00000332858 C20orf166-AS1Q96NR2 134 aa7.24□□□□□ -1.25
TUBA1B-201ENST00000332858 SPATA8Q6RVD6 105 aa7.23□□□□□ -1.25
TUBA1B-201ENST00000332858 KRTAP3-1Q9BYR8 98 aa7.22□□□□□ -1.25
TUBA1B-201ENST00000332858 UQCR11O14957 56 aa7.21□□□□□ -1.26
TUBA1B-201ENST00000332858 MIR22HGQ0VDD5 57 aa7.21□□□□□ -1.26
TUBA1B-201ENST00000332858 CSAG1Q6PB30 78 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms