RNA–Protein interactions for RNA: ENST00000327578.9

PCM1-202, Transcript of pericentriolar material 1, humanhuman

TSL 5 BASIC

Gene PCM1, Length 8,287 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-202ENST00000327578 COL12A1Q99715 3063 aa7.51□□□□□ -1.21
PCM1-202ENST00000327578 KRTAP10-8P60410 259 aa7.5□□□□□ -1.21
PCM1-202ENST00000327578 USP34Q70CQ2 3546 aa7.49□□□□□ -1.21
PCM1-202ENST00000327578 H0YAA0 97 aa7.48□□□□□ -1.21
PCM1-202ENST00000327578 UBR5O95071 2799 aaPredicted RBP7.48□□□□□ -1.21
PCM1-202ENST00000327578 KRTAP13-1Q8IUC0 172 aa7.47□□□□□ -1.21
PCM1-202ENST00000327578 P0C880 135 aa7.46□□□□□ -1.21
PCM1-202ENST00000327578 FRYLO94915 3013 aa7.46□□□□□ -1.21
PCM1-202ENST00000327578 CRYBG3Q68DQ2 2970 aa7.45□□□□□ -1.22
PCM1-202ENST00000327578 DCHS1Q96JQ0 3298 aa7.44□□□□□ -1.22
PCM1-202ENST00000327578 DMXL2Q8TDJ6 3036 aa7.44□□□□□ -1.22
PCM1-202ENST00000327578 BOD1L1Q8NFC6 3051 aa7.43□□□□□ -1.22
PCM1-202ENST00000327578 ATMQ13315 3056 aa7.42□□□□□ -1.22
PCM1-202ENST00000327578 ZNF292O60281 2723 aa7.41□□□□□ -1.22
PCM1-202ENST00000327578 SETXQ7Z333 2677 aaKnown RBP7.4□□□□□ -1.22
PCM1-202ENST00000327578 WDFY3Q8IZQ1 3526 aa7.38□□□□□ -1.23
PCM1-202ENST00000327578 ZZEF1O43149 2961 aa7.37□□□□□ -1.23
PCM1-202ENST00000327578 A0A1B0GVY2 172 aa7.35□□□□□ -1.23
PCM1-202ENST00000327578 UTP20O75691 2785 aaKnown RBP7.35□□□□□ -1.23
PCM1-202ENST00000327578 DMXL1Q9Y485 3027 aa7.34□□□□□ -1.23
PCM1-202ENST00000327578 NBEAQ8NFP9 2946 aa7.32□□□□□ -1.24
PCM1-202ENST00000327578 CHD9Q3L8U1 2897 aa7.32□□□□□ -1.24
PCM1-202ENST00000327578 TACC2O95359 2948 aa7.3□□□□□ -1.24
PCM1-202ENST00000327578 BAHCC1Q9P281 2608 aa7.3□□□□□ -1.24
PCM1-202ENST00000327578 ADGRG4Q8IZF6 3080 aa7.29□□□□□ -1.24
PCM1-202ENST00000327578 LOC400499M0QZD8 3231 aa7.28□□□□□ -1.24
PCM1-202ENST00000327578 MYO15AQ9UKN7 3530 aa7.26□□□□□ -1.25
PCM1-202ENST00000327578 ASPMQ8IZT6 3477 aa7.24□□□□□ -1.25
PCM1-202ENST00000327578 IGSF10Q6WRI0 2623 aa7.23□□□□□ -1.25
PCM1-202ENST00000327578 SPTBN5Q9NRC6 3674 aaKnown RBP7.21□□□□□ -1.25
PCM1-202ENST00000327578 TNRC18O15417 2968 aaPredicted RBP7.2□□□□□ -1.26
PCM1-202ENST00000327578 XP32Q5T750 250 aa7.19□□□□□ -1.26
PCM1-202ENST00000327578 HIVEP1P15822 2718 aa7.18□□□□□ -1.26
PCM1-202ENST00000327578 PRO2289Q9P1D8 64 aa7.16□□□□□ -1.26
PCM1-202ENST00000327578 KRTAP10-10P60014 251 aa7.13□□□□□ -1.27
PCM1-202ENST00000327578 LAMA5O15230 3695 aa7.13□□□□□ -1.27
PCM1-202ENST00000327578 CSMD1Q96PZ7 3565 aa7.12□□□□□ -1.27
PCM1-202ENST00000327578 ZFHX4Q86UP3 3567 aa7.07□□□□□ -1.28
PCM1-202ENST00000327578 CELSR2Q9HCU4 2923 aa7.06□□□□□ -1.28
PCM1-202ENST00000327578 KRTAP1-4P0C5Y4 121 aa7.03□□□□□ -1.28
PCM1-202ENST00000327578 CELSR1Q9NYQ6 3014 aa7.03□□□□□ -1.28
PCM1-202ENST00000327578 KRTAP12-2P59991 146 aa7.02□□□□□ -1.29
PCM1-202ENST00000327578 EYSQ5T1H1 3165 aa7□□□□□ -1.29
PCM1-202ENST00000327578 TGP01266 2768 aa6.99□□□□□ -1.29
PCM1-202ENST00000327578 NBPF19A0A087WUL8 3843 aa6.98□□□□□ -1.29
PCM1-202ENST00000327578 TPRXLQ17RH7 258 aa6.97□□□□□ -1.29
PCM1-202ENST00000327578 RELNP78509 3460 aa6.94□□□□□ -1.3
PCM1-202ENST00000327578 TENM1Q9UKZ4 2725 aa6.88□□□□□ -1.31
PCM1-202ENST00000327578 KRTAP13-4Q3LI77 160 aa6.87□□□□□ -1.31
PCM1-202ENST00000327578 DCHS2Q6V1P9 2916 aa6.85□□□□□ -1.31
PCM1-202ENST00000327578 KRTAP13-3Q3SY46 172 aa6.85□□□□□ -1.31
PCM1-202ENST00000327578 FBN2P35556 2912 aa6.81□□□□□ -1.32
PCM1-202ENST00000327578 KRTAP12-1P59990 96 aa6.8□□□□□ -1.32
PCM1-202ENST00000327578 SPENQ96T58 3664 aaKnown RBP6.8□□□□□ -1.32
PCM1-202ENST00000327578 NIPBLQ6KC79 2804 aaeCLIP6.77□□□□□ -1.321e-6■■■□□ 14.6
PCM1-202ENST00000327578 DMDP11532 3685 aa6.77□□□□□ -1.32
PCM1-202ENST00000327578 TENM3Q9P273 2699 aa6.77□□□□□ -1.33
PCM1-202ENST00000327578 SMG1Q96Q15 3661 aaKnown RBP6.77□□□□□ -1.33
PCM1-202ENST00000327578 NF1P21359 2839 aa6.75□□□□□ -1.33
PCM1-202ENST00000327578 KRTAP15-1Q3LI76 137 aa6.74□□□□□ -1.33
PCM1-202ENST00000327578 PDZD2O15018 2839 aa6.7□□□□□ -1.34
PCM1-202ENST00000327578 HRNRQ86YZ3 2850 aaPredicted RBP6.68□□□□□ -1.34
PCM1-202ENST00000327578 ZFHX3Q15911 3703 aa6.63□□□□□ -1.35
PCM1-202ENST00000327578 ZANQ9Y493 2812 aa6.61□□□□□ -1.35
PCM1-202ENST00000327578 INE1O15225 51 aa6.61□□□□□ -1.35
PCM1-202ENST00000327578 MXRA5Q9NR99 2828 aa6.61□□□□□ -1.35
PCM1-202ENST00000327578 SRRM2Q9UQ35 2752 aaKnown RBP6.61□□□□□ -1.35
PCM1-202ENST00000327578 FLNCQ14315 2725 aa6.58□□□□□ -1.36
PCM1-202ENST00000327578 KRTAP21-3Q3LHN1 58 aa6.54□□□□□ -1.36
PCM1-202ENST00000327578 SVEP1Q4LDE5 3571 aa6.54□□□□□ -1.36
PCM1-202ENST00000327578 CUBNO60494 3623 aa6.52□□□□□ -1.37
PCM1-202ENST00000327578 TENM4Q6N022 2769 aa6.48□□□□□ -1.37
PCM1-202ENST00000327578 KRTAP3-1Q9BYR8 98 aa6.48□□□□□ -1.37
PCM1-202ENST00000327578 VWFP04275 2813 aa6.43□□□□□ -1.38
PCM1-202ENST00000327578 CRCT1Q9UGL9 99 aa6.39□□□□□ -1.39
PCM1-202ENST00000327578 VPS13CQ709C8 3753 aa6.39□□□□□ -1.39
PCM1-202ENST00000327578 TENM2Q9NT68 2774 aa6.37□□□□□ -1.39
PCM1-202ENST00000327578 PKD1L1Q8TDX9 2849 aa6.37□□□□□ -1.39
PCM1-202ENST00000327578 KRTAP10-6P60371 365 aaPredicted RBP6.37□□□□□ -1.39
PCM1-202ENST00000327578 MEGF8Q7Z7M0 2845 aa6.32□□□□□ -1.4
PCM1-202ENST00000327578 MUC3AQ02505 3323 aa6.29□□□□□ -1.4
PCM1-202ENST00000327578 COL7A1Q02388 2944 aa6.26□□□□□ -1.41
PCM1-202ENST00000327578 KRTAP10-12P60413 245 aa6.24□□□□□ -1.41
PCM1-202ENST00000327578 CSMD3Q7Z407 3707 aa6.23□□□□□ -1.41
PCM1-202ENST00000327578 CSMD2Q7Z408 3487 aa6.23□□□□□ -1.41
PCM1-202ENST00000327578 BSNQ9UPA5 3926 aa6.19□□□□□ -1.42
PCM1-202ENST00000327578 TRRAPQ9Y4A5 3859 aa6.18□□□□□ -1.42
PCM1-202ENST00000327578 AKAP9Q99996 3911 aa6.15□□□□□ -1.43
PCM1-202ENST00000327578 FBN3Q75N90 2809 aa6.15□□□□□ -1.43
PCM1-202ENST00000327578 KRTAP3-2Q9BYR7 98 aa6.07□□□□□ -1.44
PCM1-202ENST00000327578 KRTAP3-3Q9BYR6 98 aa6.07□□□□□ -1.44
PCM1-202ENST00000327578 KRTAP12-3P60328 96 aa6.06□□□□□ -1.44
PCM1-202ENST00000327578 LCE3AQ5TA76 89 aa6.02□□□□□ -1.45
PCM1-202ENST00000327578 ALMS1Q8TCU4 4167 aa6.01□□□□□ -1.45
PCM1-202ENST00000327578 FBN1P35555 2871 aaKnown RBP6□□□□□ -1.45
PCM1-202ENST00000327578 KRTAP10-5P60370 271 aa5.96□□□□□ -1.45
PCM1-202ENST00000327578 OTOGQ6ZRI0 2925 aa5.95□□□□□ -1.46
PCM1-202ENST00000327578 KRTAP23-1A1A580 65 aa5.93□□□□□ -1.46
PCM1-202ENST00000327578 ANK3Q12955 4377 aaKnown RBP5.88□□□□□ -1.47
PCM1-202ENST00000327578 HUWE1Q7Z6Z7 4374 aaKnown RBP5.84□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms