RNA–Protein interactions for RNA: ENST00000316788.11

AP3S1-201, Transcript of adaptor related protein complex 3 subunit sigma 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene AP3S1, Length 1,730 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1-201ENST00000316788 IGLV7-46A0A075B6I9 117 aa11.58□□□□□ -0.56
AP3S1-201ENST00000316788 MRPL34Q9BQ48 92 aaKnown RBP11.58□□□□□ -0.56
AP3S1-201ENST00000316788 SRRM2Q9UQ35 2752 aaKnown RBP11.57□□□□□ -0.56
AP3S1-201ENST00000316788 IGHV6-1A0A0B4J1U7 121 aa11.57□□□□□ -0.56
AP3S1-201ENST00000316788 ANAPC11Q9NYG5 84 aa11.56□□□□□ -0.56
AP3S1-201ENST00000316788 PKD1P98161 4303 aa11.56□□□□□ -0.56
AP3S1-201ENST00000316788 SSBP3-AS1Q7Z2R9 100 aa11.55□□□□□ -0.56
AP3S1-201ENST00000316788 DNAH5Q8TE73 4624 aa11.54□□□□□ -0.56
AP3S1-201ENST00000316788 C1orf195Q5TG92 126 aa11.53□□□□□ -0.56
AP3S1-201ENST00000316788 DNAH8Q96JB1 4490 aa11.52□□□□□ -0.57
AP3S1-201ENST00000316788 BRK1Q8WUW1 75 aa11.52□□□□□ -0.57
AP3S1-201ENST00000316788 HECTD4Q9Y4D8 3996 aa11.5□□□□□ -0.57
AP3S1-201ENST00000316788 PKHD1P08F94 4074 aa11.47□□□□□ -0.57
AP3S1-201ENST00000316788 C8orf87E5RJ46 101 aa11.46□□□□□ -0.57
AP3S1-201ENST00000316788 NDUFS5O43920 106 aa11.46□□□□□ -0.57
AP3S1-201ENST00000316788 EPPK1P58107 5090 aaKnown RBP11.45□□□□□ -0.58
AP3S1-201ENST00000316788 CIRBP-AS1Q8TBR5 109 aa11.45□□□□□ -0.58
AP3S1-201ENST00000316788 LIMD2Q9BT23 127 aa11.44□□□□□ -0.58
AP3S1-201ENST00000316788 A0A087X002 238 aa11.43□□□□□ -0.58
AP3S1-201ENST00000316788 NOTCH2NLQ7Z3S9 236 aa11.43□□□□□ -0.58
AP3S1-201ENST00000316788 COA5Q86WW8 74 aa11.43□□□□□ -0.58
AP3S1-201ENST00000316788 LOC101927531A0A1B0GV80 90 aa11.42□□□□□ -0.58
AP3S1-201ENST00000316788 Q6ZSA8 131 aa11.42□□□□□ -0.58
AP3S1-201ENST00000316788 Q8N9P0 234 aaPredicted RBP11.42□□□□□ -0.58
AP3S1-201ENST00000316788 DYNC1H1Q14204 4646 aaKnown RBP11.41□□□□□ -0.58
AP3S1-201ENST00000316788 KRTAP10-2P60368 255 aa11.4□□□□□ -0.58
AP3S1-201ENST00000316788 PCOTHQ58A44 107 aa11.4□□□□□ -0.58
AP3S1-201ENST00000316788 A0A1B0GVY2 172 aa11.39□□□□□ -0.59
AP3S1-201ENST00000316788 KRTAP13-3Q3SY46 172 aa11.39□□□□□ -0.59
AP3S1-201ENST00000316788 LRP1BQ9NZR2 4599 aa11.39□□□□□ -0.59
AP3S1-201ENST00000316788 PSPHP1O15172 72 aa11.38□□□□□ -0.59
AP3S1-201ENST00000316788 SPINK6Q6UWN8 80 aa11.37□□□□□ -0.59
AP3S1-201ENST00000316788 A8MUN3 132 aa11.35□□□□□ -0.59
AP3S1-201ENST00000316788 Q5VV11 94 aa11.35□□□□□ -0.59
AP3S1-201ENST00000316788 KRTAP13-2Q52LG2 175 aa11.3□□□□□ -0.6
AP3S1-201ENST00000316788 KRTAP10-1P60331 282 aa11.29□□□□□ -0.6
AP3S1-201ENST00000316788 Q5W150 140 aa11.29□□□□□ -0.6
AP3S1-201ENST00000316788 LINC00313P59037 77 aa11.26□□□□□ -0.61
AP3S1-201ENST00000316788 Q75L30 129 aa11.26□□□□□ -0.61
AP3S1-201ENST00000316788 HRES1P13985 223 aa11.25□□□□□ -0.61
AP3S1-201ENST00000316788 PRR15LQ9BU68 103 aa11.25□□□□□ -0.61
AP3S1-201ENST00000316788 APOBP04114 4563 aaKnown RBP11.25□□□□□ -0.61
AP3S1-201ENST00000316788 FAM229AH3BQW9 127 aa11.24□□□□□ -0.61
AP3S1-201ENST00000316788 LINC01558Q9Y6Z2 57 aa11.24□□□□□ -0.61
AP3S1-201ENST00000316788 KRTAP1-4P0C5Y4 121 aa11.22□□□□□ -0.61
AP3S1-201ENST00000316788 CHKB-CPT1BH3BT56 60 aa11.19□□□□□ -0.62
AP3S1-201ENST00000316788 KRTAP16-1A8MUX0 517 aa11.16□□□□□ -0.62
AP3S1-201ENST00000316788 BIRC6Q9NR09 4857 aa11.15□□□□□ -0.62
AP3S1-201ENST00000316788 ACYP2P14621 99 aa11.14□□□□□ -0.63
AP3S1-201ENST00000316788 IGKV2-30P06310 120 aa11.13□□□□□ -0.63
AP3S1-201ENST00000316788 DMAC1Q96GE9 116 aa11.12□□□□□ -0.63
AP3S1-201ENST00000316788 KIAA1109Q2LD37 5005 aa11.12□□□□□ -0.63
AP3S1-201ENST00000316788 SPAG11AQ6PDA7 123 aa11.11□□□□□ -0.63
AP3S1-201ENST00000316788 RYR1P21817 5038 aa11.1□□□□□ -0.63
AP3S1-201ENST00000316788 HSPG2P98160 4391 aa11.1□□□□□ -0.63
AP3S1-201ENST00000316788 SPINK1P00995 79 aa11.09□□□□□ -0.63
AP3S1-201ENST00000316788 FAT1Q14517 4588 aa11.08□□□□□ -0.64
AP3S1-201ENST00000316788 C4orf48Q5BLP8 95 aa11.07□□□□□ -0.64
AP3S1-201ENST00000316788 RPS29P62273 56 aaKnown RBP11.06□□□□□ -0.64
AP3S1-201ENST00000316788 TYMSOSQ8TAI1 123 aa11.05□□□□□ -0.64
AP3S1-201ENST00000316788 A6NED7 52 aa11.04□□□□□ -0.64
AP3S1-201ENST00000316788 PLA2G1BP04054 148 aaKnown RBP11.04□□□□□ -0.64
AP3S1-201ENST00000316788 PRR26Q8N8Z3 221 aa11.02□□□□□ -0.65
AP3S1-201ENST00000316788 CDC42SE1Q9NRR8 79 aa11.02□□□□□ -0.65
AP3S1-201ENST00000316788 LCA10Q71F78 164 aa11.01□□□□□ -0.65
AP3S1-201ENST00000316788 ATP11AUNQ6ZP68 121 aa11□□□□□ -0.65
AP3S1-201ENST00000316788 A8MU10 97 aa10.98□□□□□ -0.65
AP3S1-201ENST00000316788 SMR3BP02814 79 aaPredicted RBP10.95□□□□□ -0.66
AP3S1-201ENST00000316788 KRTAP17-1Q9BYP8 105 aa10.95□□□□□ -0.66
AP3S1-201ENST00000316788 VPS13BQ7Z7G8 4022 aa10.95□□□□□ -0.66
AP3S1-201ENST00000316788 RETNLBQ9BQ08 111 aa10.95□□□□□ -0.66
AP3S1-201ENST00000316788 PMAIP1Q13794 54 aa10.94□□□□□ -0.66
AP3S1-201ENST00000316788 LINC00304Q8N9R0 145 aa10.92□□□□□ -0.66
AP3S1-201ENST00000316788 HERC2O95714 4834 aa10.91□□□□□ -0.66
AP3S1-201ENST00000316788 SPINK7P58062 85 aa10.88□□□□□ -0.67
AP3S1-201ENST00000316788 IGKV2D-30A0A075B6S6 120 aa10.87□□□□□ -0.67
AP3S1-201ENST00000316788 SPTSSBQ8NFR3 76 aa10.83□□□□□ -0.68
AP3S1-201ENST00000316788 C7orf65Q6ZTY9 151 aa10.81□□□□□ -0.68
AP3S1-201ENST00000316788 A6NN06 94 aa10.79□□□□□ -0.68
AP3S1-201ENST00000316788 A0A1B0GU69 56 aa10.77□□□□□ -0.69
AP3S1-201ENST00000316788 KRTAP10-4P60372 401 aaPredicted RBP10.76□□□□□ -0.69
AP3S1-201ENST00000316788 Q5VSD8 79 aa10.75□□□□□ -0.69
AP3S1-201ENST00000316788 KRTAP4-5Q9BYR2 181 aa10.75□□□□□ -0.69
AP3S1-201ENST00000316788 Q8N1X5 172 aa10.75□□□□□ -0.69
AP3S1-201ENST00000316788 KTN1-AS1Q86SY8 53 aa10.74□□□□□ -0.69
AP3S1-201ENST00000316788 ABCA13Q86UQ4 5058 aa10.73□□□□□ -0.69
AP3S1-201ENST00000316788 C20orf166-AS1Q96NR2 134 aa10.72□□□□□ -0.69
AP3S1-201ENST00000316788 A8MUU9 505 aa10.72□□□□□ -0.69
AP3S1-201ENST00000316788 PKHD1L1Q86WI1 4243 aa10.68□□□□□ -0.7
AP3S1-201ENST00000316788 SPATA8Q6RVD6 105 aa10.66□□□□□ -0.7
AP3S1-201ENST00000316788 LRP1Q07954 4544 aaKnown RBP10.62□□□□□ -0.71
AP3S1-201ENST00000316788 MYCBP2O75592 4640 aa10.62□□□□□ -0.71
AP3S1-201ENST00000316788 UQCR11O14957 56 aa10.61□□□□□ -0.71
AP3S1-201ENST00000316788 FAT3Q8TDW7 4589 aa10.58□□□□□ -0.72
AP3S1-201ENST00000316788 C9orf92A6NGG3 77 aa10.55□□□□□ -0.72
AP3S1-201ENST00000316788 SEC61GP60059 68 aa10.55□□□□□ -0.72
AP3S1-201ENST00000316788 MIR22HGQ0VDD5 57 aa10.55□□□□□ -0.72
AP3S1-201ENST00000316788 FLG2Q5D862 2391 aaPredicted RBP10.54□□□□□ -0.72
AP3S1-201ENST00000316788 PCLOQ9Y6V0 5065 aa10.53□□□□□ -0.72
AP3S1-201ENST00000316788 TNXBP22105 4242 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms