RNA–Protein interactions for RNA: ENST00000316068.7

MCM9-201, Transcript of minichromosome maintenance 9 homologous recombination repair factor, humanhuman

TSL 1 (best) BASIC

Gene MCM9, Length 2,442 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCM9-201ENST00000316068 A0A1B0GVX0 72 aa10.52□□□□□ -0.73
MCM9-201ENST00000316068 CD164Q04900 197 aa10.52□□□□□ -0.73
MCM9-201ENST00000316068 A8MU10 97 aa10.52□□□□□ -0.73
MCM9-201ENST00000316068 NDUFS5O43920 106 aa10.49□□□□□ -0.73
MCM9-201ENST00000316068 ZNF706Q9Y5V0 76 aaPredicted RBP10.48□□□□□ -0.73
MCM9-201ENST00000316068 VPS13BQ7Z7G8 4022 aa10.47□□□□□ -0.73
MCM9-201ENST00000316068 SPINK6Q6UWN8 80 aa10.47□□□□□ -0.73
MCM9-201ENST00000316068 IGLV7-46A0A075B6I9 117 aa10.45□□□□□ -0.74
MCM9-201ENST00000316068 Q8N9P0 234 aaPredicted RBP10.45□□□□□ -0.74
MCM9-201ENST00000316068 IGLV7-43P04211 117 aa10.44□□□□□ -0.74
MCM9-201ENST00000316068 KRTAP10-2P60368 255 aa10.44□□□□□ -0.74
MCM9-201ENST00000316068 Q5VV11 94 aa10.44□□□□□ -0.74
MCM9-201ENST00000316068 COA5Q86WW8 74 aa10.44□□□□□ -0.74
MCM9-201ENST00000316068 MRPL34Q9BQ48 92 aaKnown RBP10.44□□□□□ -0.74
MCM9-201ENST00000316068 CIRBP-AS1Q8TBR5 109 aa10.43□□□□□ -0.74
MCM9-201ENST00000316068 C1orf134Q5TEV5 83 aa10.43□□□□□ -0.74
MCM9-201ENST00000316068 Q5W150 140 aa10.42□□□□□ -0.74
MCM9-201ENST00000316068 TP53AIP1Q9HCN2 124 aa10.41□□□□□ -0.74
MCM9-201ENST00000316068 LY6G6CO95867 125 aa10.4□□□□□ -0.74
MCM9-201ENST00000316068 CDK2AP2O75956 126 aa10.38□□□□□ -0.75
MCM9-201ENST00000316068 PKHD1P08F94 4074 aa10.36□□□□□ -0.75
MCM9-201ENST00000316068 PRR15LQ9BU68 103 aa10.34□□□□□ -0.75
MCM9-201ENST00000316068 KRTAP13-3Q3SY46 172 aa10.34□□□□□ -0.75
MCM9-201ENST00000316068 HRES1P13985 223 aa10.31□□□□□ -0.76
MCM9-201ENST00000316068 KRTAP13-2Q52LG2 175 aa10.3□□□□□ -0.76
MCM9-201ENST00000316068 V9GYY9 64 aa10.29□□□□□ -0.76
MCM9-201ENST00000316068 C1orf195Q5TG92 126 aa10.29□□□□□ -0.76
MCM9-201ENST00000316068 CHKB-CPT1BH3BT56 60 aa10.28□□□□□ -0.76
MCM9-201ENST00000316068 SPAG11AQ6PDA7 123 aa10.27□□□□□ -0.76
MCM9-201ENST00000316068 KRTAP10-1P60331 282 aa10.26□□□□□ -0.77
MCM9-201ENST00000316068 LIMD2Q9BT23 127 aa10.26□□□□□ -0.77
MCM9-201ENST00000316068 RETNLBQ9BQ08 111 aa10.26□□□□□ -0.77
MCM9-201ENST00000316068 SACSQ9NZJ4 4579 aa10.24□□□□□ -0.77
MCM9-201ENST00000316068 LCA10Q71F78 164 aa10.22□□□□□ -0.77
MCM9-201ENST00000316068 SSBP3-AS1Q7Z2R9 100 aa10.22□□□□□ -0.77
MCM9-201ENST00000316068 LOC101927531A0A1B0GV80 90 aa10.21□□□□□ -0.78
MCM9-201ENST00000316068 PRR26Q8N8Z3 221 aa10.19□□□□□ -0.78
MCM9-201ENST00000316068 Q75L30 129 aa10.18□□□□□ -0.78
MCM9-201ENST00000316068 Q6ZSA8 131 aa10.17□□□□□ -0.78
MCM9-201ENST00000316068 KRTAP1-4P0C5Y4 121 aa10.16□□□□□ -0.78
MCM9-201ENST00000316068 FAT1Q14517 4588 aa10.16□□□□□ -0.78
MCM9-201ENST00000316068 LINC00313P59037 77 aa10.15□□□□□ -0.78
MCM9-201ENST00000316068 LINC01558Q9Y6Z2 57 aa10.15□□□□□ -0.78
MCM9-201ENST00000316068 DYNC1H1Q14204 4646 aaKnown RBP10.14□□□□□ -0.79
MCM9-201ENST00000316068 A6NED7 52 aa10.13□□□□□ -0.79
MCM9-201ENST00000316068 KRTAP16-1A8MUX0 517 aa10.12□□□□□ -0.79
MCM9-201ENST00000316068 C8orf87E5RJ46 101 aa10.11□□□□□ -0.79
MCM9-201ENST00000316068 SPINK7P58062 85 aa10.11□□□□□ -0.79
MCM9-201ENST00000316068 SPTSSBQ8NFR3 76 aa10.07□□□□□ -0.8
MCM9-201ENST00000316068 PMAIP1Q13794 54 aa10.05□□□□□ -0.8
MCM9-201ENST00000316068 IGKV2-30P06310 120 aa10.03□□□□□ -0.8
MCM9-201ENST00000316068 FAM229AH3BQW9 127 aa10.02□□□□□ -0.81
MCM9-201ENST00000316068 DMAC1Q96GE9 116 aa10.01□□□□□ -0.81
MCM9-201ENST00000316068 APOBP04114 4563 aaKnown RBP10□□□□□ -0.81
MCM9-201ENST00000316068 PLA2G1BP04054 148 aaKnown RBP9.99□□□□□ -0.81
MCM9-201ENST00000316068 ACYP2P14621 99 aa9.98□□□□□ -0.81
MCM9-201ENST00000316068 CDC42SE1Q9NRR8 79 aa9.98□□□□□ -0.81
MCM9-201ENST00000316068 PKHD1L1Q86WI1 4243 aa9.96□□□□□ -0.82
MCM9-201ENST00000316068 IGKV2D-30A0A075B6S6 120 aa9.96□□□□□ -0.82
MCM9-201ENST00000316068 ATP11AUNQ6ZP68 121 aa9.93□□□□□ -0.82
MCM9-201ENST00000316068 TYMSOSQ8TAI1 123 aa9.93□□□□□ -0.82
MCM9-201ENST00000316068 A6NN06 94 aa9.92□□□□□ -0.82
MCM9-201ENST00000316068 SMR3BP02814 79 aaPredicted RBP9.87□□□□□ -0.83
MCM9-201ENST00000316068 C4orf48Q5BLP8 95 aa9.85□□□□□ -0.83
MCM9-201ENST00000316068 KMT2CQ8NEZ4 4911 aaKnown RBP9.84□□□□□ -0.83
MCM9-201ENST00000316068 SPINK1P00995 79 aa9.83□□□□□ -0.84
MCM9-201ENST00000316068 RYR2Q92736 4967 aa9.82□□□□□ -0.84
MCM9-201ENST00000316068 KTN1-AS1Q86SY8 53 aa9.8□□□□□ -0.84
MCM9-201ENST00000316068 SEC61GP60059 68 aa9.79□□□□□ -0.84
MCM9-201ENST00000316068 C7orf65Q6ZTY9 151 aa9.79□□□□□ -0.84
MCM9-201ENST00000316068 Q8N1X5 172 aa9.78□□□□□ -0.84
MCM9-201ENST00000316068 LINC00304Q8N9R0 145 aa9.77□□□□□ -0.84
MCM9-201ENST00000316068 A0A1B0GU69 56 aa9.77□□□□□ -0.85
MCM9-201ENST00000316068 LRP1Q07954 4544 aaKnown RBP9.76□□□□□ -0.85
MCM9-201ENST00000316068 C9orf92A6NGG3 77 aa9.74□□□□□ -0.85
MCM9-201ENST00000316068 KRTAP10-4P60372 401 aaPredicted RBP9.7□□□□□ -0.86
MCM9-201ENST00000316068 FAT3Q8TDW7 4589 aa9.68□□□□□ -0.86
MCM9-201ENST00000316068 HSPG2P98160 4391 aa9.65□□□□□ -0.86
MCM9-201ENST00000316068 TNXBP22105 4242 aa9.65□□□□□ -0.86
MCM9-201ENST00000316068 MYCBP2O75592 4640 aa9.64□□□□□ -0.87
MCM9-201ENST00000316068 SPATA8Q6RVD6 105 aa9.63□□□□□ -0.87
MCM9-201ENST00000316068 RBM12B-AS1Q9P1G2 102 aa9.63□□□□□ -0.87
MCM9-201ENST00000316068 A0A1B0GVY2 172 aa9.63□□□□□ -0.87
MCM9-201ENST00000316068 ADM2Q7Z4H4 148 aa9.62□□□□□ -0.87
MCM9-201ENST00000316068 RPS29P62273 56 aaKnown RBP9.61□□□□□ -0.87
MCM9-201ENST00000316068 KRTAP3-1Q9BYR8 98 aa9.61□□□□□ -0.87
MCM9-201ENST00000316068 MIR22HGQ0VDD5 57 aa9.59□□□□□ -0.87
MCM9-201ENST00000316068 PRAC1Q96KF2 57 aa9.58□□□□□ -0.88
MCM9-201ENST00000316068 A8MUU9 505 aa9.57□□□□□ -0.88
MCM9-201ENST00000316068 UQCR11O14957 56 aa9.56□□□□□ -0.88
MCM9-201ENST00000316068 C20orf166-AS1Q96NR2 134 aa9.56□□□□□ -0.88
MCM9-201ENST00000316068 FLG2Q5D862 2391 aaPredicted RBP9.56□□□□□ -0.88
MCM9-201ENST00000316068 KRTAP21-3Q3LHN1 58 aa9.55□□□□□ -0.88
MCM9-201ENST00000316068 RYR3Q15413 4870 aa9.51□□□□□ -0.89
MCM9-201ENST00000316068 H0YAA0 97 aa9.41□□□□□ -0.9
MCM9-201ENST00000316068 RYR1P21817 5038 aa9.4□□□□□ -0.91
MCM9-201ENST00000316068 LPAP08519 4548 aa9.37□□□□□ -0.91
MCM9-201ENST00000316068 DMBT1Q9UGM3 2413 aaPredicted RBP9.35□□□□□ -0.91
MCM9-201ENST00000316068 KIAA1109Q2LD37 5005 aa9.34□□□□□ -0.91
MCM9-201ENST00000316068 KRTAP17-1Q9BYP8 105 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms