RNA–Protein interactions for RNA: ENST00000314191.6

PRKDC-201, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PRKDC, Length 13,509 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-201ENST00000314191 Q5VSD8 79 aa3.55□□□□□ -1.84
PRKDC-201ENST00000314191 ZZEF1O43149 2961 aa3.55□□□□□ -1.84
PRKDC-201ENST00000314191 SPINK7P58062 85 aa3.55□□□□□ -1.84
PRKDC-201ENST00000314191 COX6B2Q6YFQ2 88 aa3.55□□□□□ -1.84
PRKDC-201ENST00000314191 KRTAP21-3Q3LHN1 58 aa3.54□□□□□ -1.84
PRKDC-201ENST00000314191 KALRNO60229 2985 aa3.53□□□□□ -1.84
PRKDC-201ENST00000314191 Q5VV11 94 aa3.53□□□□□ -1.84
PRKDC-201ENST00000314191 CELSR2Q9HCU4 2923 aa3.53□□□□□ -1.84
PRKDC-201ENST00000314191 HRNRQ86YZ3 2850 aaPredicted RBP3.52□□□□□ -1.85
PRKDC-201ENST00000314191 KRTAP16-1A8MUX0 517 aa3.52□□□□□ -1.85
PRKDC-201ENST00000314191 FLNCQ14315 2725 aa3.51□□□□□ -1.85
PRKDC-201ENST00000314191 Q6ZSA8 131 aa3.5□□□□□ -1.85
PRKDC-201ENST00000314191 KRTAP1-4P0C5Y4 121 aa3.49□□□□□ -1.85
PRKDC-201ENST00000314191 CSMD2Q7Z408 3487 aa3.48□□□□□ -1.85
PRKDC-201ENST00000314191 SRRM2Q9UQ35 2752 aaKnown RBP3.48□□□□□ -1.85
PRKDC-201ENST00000314191 A0A0D9SG42 100 aa3.48□□□□□ -1.85
PRKDC-201ENST00000314191 SEC61BP60468 96 aaKnown RBP3.48□□□□□ -1.85
PRKDC-201ENST00000314191 HIVEP1P15822 2718 aa3.47□□□□□ -1.85
PRKDC-201ENST00000314191 SVEP1Q4LDE5 3571 aa3.46□□□□□ -1.85
PRKDC-201ENST00000314191 CSMD1Q96PZ7 3565 aa3.46□□□□□ -1.86
PRKDC-201ENST00000314191 PDZD2O15018 2839 aa3.46□□□□□ -1.86
PRKDC-201ENST00000314191 CSAG1Q6PB30 78 aa3.46□□□□□ -1.86
PRKDC-201ENST00000314191 A0A1B0GU33 70 aa3.45□□□□□ -1.86
PRKDC-201ENST00000314191 CRYBG3Q68DQ2 2970 aa3.45□□□□□ -1.86
PRKDC-201ENST00000314191 RPS29P62273 56 aaKnown RBP3.44□□□□□ -1.86
PRKDC-201ENST00000314191 SMG1Q96Q15 3661 aaKnown RBP3.44□□□□□ -1.86
PRKDC-201ENST00000314191 NF1P21359 2839 aa3.42□□□□□ -1.86
PRKDC-201ENST00000314191 TENM3Q9P273 2699 aa3.42□□□□□ -1.86
PRKDC-201ENST00000314191 SPENQ96T58 3664 aaKnown RBP3.42□□□□□ -1.86
PRKDC-201ENST00000314191 ASH1LQ9NR48 2969 aaKnown RBP3.41□□□□□ -1.86
PRKDC-201ENST00000314191 PRAC1Q96KF2 57 aa3.41□□□□□ -1.86
PRKDC-201ENST00000314191 A8MU10 97 aa3.41□□□□□ -1.86
PRKDC-201ENST00000314191 S4R3F8 94 aa3.39□□□□□ -1.87
PRKDC-201ENST00000314191 ZANQ9Y493 2812 aa3.37□□□□□ -1.87
PRKDC-201ENST00000314191 ROMO1P60602 79 aa3.36□□□□□ -1.87
PRKDC-201ENST00000314191 RPL37P61927 97 aaKnown RBP3.36□□□□□ -1.87
PRKDC-201ENST00000314191 SPATA8Q6RVD6 105 aa3.36□□□□□ -1.87
PRKDC-201ENST00000314191 PLAC4Q8WY50 150 aa3.36□□□□□ -1.87
PRKDC-201ENST00000314191 A0A1B0GVY2 172 aa3.36□□□□□ -1.87
PRKDC-201ENST00000314191 A8MUU9 505 aa3.36□□□□□ -1.87
PRKDC-201ENST00000314191 C20orf166-AS1Q96NR2 134 aa3.34□□□□□ -1.87
PRKDC-201ENST00000314191 H1FX-AS1Q4G0G2 97 aa3.34□□□□□ -1.87
PRKDC-201ENST00000314191 M0R2T5 61 aa3.32□□□□□ -1.88
PRKDC-201ENST00000314191 TENM4Q6N022 2769 aa3.32□□□□□ -1.88
PRKDC-201ENST00000314191 A6NN06 94 aa3.32□□□□□ -1.88
PRKDC-201ENST00000314191 DCHS2Q6V1P9 2916 aa3.32□□□□□ -1.88
PRKDC-201ENST00000314191 ANK3Q12955 4377 aaKnown RBP3.32□□□□□ -1.88
PRKDC-201ENST00000314191 OTOGQ6ZRI0 2925 aa3.31□□□□□ -1.88
PRKDC-201ENST00000314191 TENM1Q9UKZ4 2725 aa3.31□□□□□ -1.88
PRKDC-201ENST00000314191 KRTAP13-3Q3SY46 172 aa3.31□□□□□ -1.88
PRKDC-201ENST00000314191 R4GN34 69 aa3.31□□□□□ -1.88
PRKDC-201ENST00000314191 XP32Q5T750 250 aa3.3□□□□□ -1.88
PRKDC-201ENST00000314191 ADM2Q7Z4H4 148 aa3.29□□□□□ -1.88
PRKDC-201ENST00000314191 CUBNO60494 3623 aa3.28□□□□□ -1.88
PRKDC-201ENST00000314191 TGP01266 2768 aa3.28□□□□□ -1.88
PRKDC-201ENST00000314191 KRTAP25-1Q3LHN0 102 aa3.28□□□□□ -1.88
PRKDC-201ENST00000314191 M0QZ58 72 aa3.28□□□□□ -1.89
PRKDC-201ENST00000314191 KRTAP10-8P60410 259 aa3.27□□□□□ -1.89
PRKDC-201ENST00000314191 CELSR1Q9NYQ6 3014 aa3.27□□□□□ -1.89
PRKDC-201ENST00000314191 FBN1P35555 2871 aaKnown RBP3.26□□□□□ -1.89
PRKDC-201ENST00000314191 BSNQ9UPA5 3926 aa3.26□□□□□ -1.89
PRKDC-201ENST00000314191 NDUFAF8A1L188 74 aa3.25□□□□□ -1.89
PRKDC-201ENST00000314191 MXRA5Q9NR99 2828 aa3.21□□□□□ -1.9
PRKDC-201ENST00000314191 TENM2Q9NT68 2774 aa3.19□□□□□ -1.9
PRKDC-201ENST00000314191 TPRXLQ17RH7 258 aa3.18□□□□□ -1.9
PRKDC-201ENST00000314191 KRTAP3-1Q9BYR8 98 aa3.18□□□□□ -1.9
PRKDC-201ENST00000314191 NBPF19A0A087WUL8 3843 aa3.17□□□□□ -1.9
PRKDC-201ENST00000314191 H0YAA0 97 aa3.15□□□□□ -1.91
PRKDC-201ENST00000314191 KRTAP10-4P60372 401 aaPredicted RBP3.15□□□□□ -1.91
PRKDC-201ENST00000314191 VWFP04275 2813 aa3.13□□□□□ -1.91
PRKDC-201ENST00000314191 P0C880 135 aa3.13□□□□□ -1.91
PRKDC-201ENST00000314191 MT1HL1P0DM35 61 aa3.11□□□□□ -1.91
PRKDC-201ENST00000314191 PP632Q6XCG6 107 aa3.1□□□□□ -1.91
PRKDC-201ENST00000314191 HUWE1Q7Z6Z7 4374 aaKnown RBP3.08□□□□□ -1.92
PRKDC-201ENST00000314191 COL7A1Q02388 2944 aa3.07□□□□□ -1.92
PRKDC-201ENST00000314191 PKD1L1Q8TDX9 2849 aa3.07□□□□□ -1.92
PRKDC-201ENST00000314191 C10orf95Q9H7T3 257 aa3.07□□□□□ -1.92
PRKDC-201ENST00000314191 KRTAP4-5Q9BYR2 181 aa3.06□□□□□ -1.92
PRKDC-201ENST00000314191 FBN3Q75N90 2809 aa3.04□□□□□ -1.92
PRKDC-201ENST00000314191 DNHD1Q96M86 4753 aa3.02□□□□□ -1.93
PRKDC-201ENST00000314191 ZFHX3Q15911 3703 aa3.02□□□□□ -1.93
PRKDC-201ENST00000314191 KRTAP13-4Q3LI77 160 aa3.01□□□□□ -1.93
PRKDC-201ENST00000314191 KRTAP10-6P60371 365 aaPredicted RBP3□□□□□ -1.93
PRKDC-201ENST00000314191 KRTAP12-2P59991 146 aa2.98□□□□□ -1.93
PRKDC-201ENST00000314191 ZNF469Q96JG9 3925 aaPredicted RBP2.98□□□□□ -1.93
PRKDC-201ENST00000314191 TNP1P09430 55 aa2.98□□□□□ -1.93
PRKDC-201ENST00000314191 KRTAP3-3Q9BYR6 98 aa2.98□□□□□ -1.93
PRKDC-201ENST00000314191 MEGF8Q7Z7M0 2845 aa2.97□□□□□ -1.93
PRKDC-201ENST00000314191 DNAH9Q9NYC9 4486 aa2.96□□□□□ -1.94
PRKDC-201ENST00000314191 LRP1BQ9NZR2 4599 aa2.96□□□□□ -1.94
PRKDC-201ENST00000314191 KRTAP10-10P60014 251 aa2.96□□□□□ -1.94
PRKDC-201ENST00000314191 DNAH5Q8TE73 4624 aa2.96□□□□□ -1.94
PRKDC-201ENST00000314191 TRRAPQ9Y4A5 3859 aa2.95□□□□□ -1.94
PRKDC-201ENST00000314191 KRTAP12-1P59990 96 aa2.95□□□□□ -1.94
PRKDC-201ENST00000314191 KRTAP3-2Q9BYR7 98 aa2.94□□□□□ -1.94
PRKDC-201ENST00000314191 DYNC1H1Q14204 4646 aaKnown RBP2.93□□□□□ -1.94
PRKDC-201ENST00000314191 PLECQ15149 4684 aaKnown RBP2.92□□□□□ -1.94
PRKDC-201ENST00000314191 PRO2289Q9P1D8 64 aa2.92□□□□□ -1.94
PRKDC-201ENST00000314191 FAT1Q14517 4588 aa2.92□□□□□ -1.94
PRKDC-201ENST00000314191 VPS13CQ709C8 3753 aa2.91□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms