RNA–Protein interactions for RNA: ENST00000314045.11

DDX54-202, Transcript of DEAD-box helicase 54, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DDX54, Length 4,380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-202ENST00000314045 COA5Q86WW8 74 aa8.14□□□□□ -1.11
DDX54-202ENST00000314045 A0A087X002 238 aa8.11□□□□□ -1.11
DDX54-202ENST00000314045 PMAIP1Q13794 54 aa8.09□□□□□ -1.11
DDX54-202ENST00000314045 FP248Q71RG6 208 aaPredicted RBP8.09□□□□□ -1.11
DDX54-202ENST00000314045 KRTAP13-1Q8IUC0 172 aa8.05□□□□□ -1.12
DDX54-202ENST00000314045 SPANXA2-OT1Q8N9U9 137 aa8.05□□□□□ -1.12
DDX54-202ENST00000314045 Q8N1X5 172 aa8.04□□□□□ -1.12
DDX54-202ENST00000314045 COX6B2Q6YFQ2 88 aa8.03□□□□□ -1.12
DDX54-202ENST00000314045 A8MUN3 132 aa7.99□□□□□ -1.13
DDX54-202ENST00000314045 ANK3Q12955 4377 aaKnown RBP7.99□□□□□ -1.13
DDX54-202ENST00000314045 SRRM2Q9UQ35 2752 aaKnown RBP7.99□□□□□ -1.13
DDX54-202ENST00000314045 ZCCHC13Q8WW36 166 aaKnown RBP7.98□□□□□ -1.13
DDX54-202ENST00000314045 Q8N9P0 234 aaPredicted RBP7.97□□□□□ -1.13
DDX54-202ENST00000314045 HRES1P13985 223 aa7.96□□□□□ -1.13
DDX54-202ENST00000314045 RBM12B-AS1Q9P1G2 102 aa7.96□□□□□ -1.13
DDX54-202ENST00000314045 Q6ZSA8 131 aa7.96□□□□□ -1.14
DDX54-202ENST00000314045 CYP4F30PQ9H0H9 118 aa7.94□□□□□ -1.14
DDX54-202ENST00000314045 KRTAP13-2Q52LG2 175 aa7.93□□□□□ -1.14
DDX54-202ENST00000314045 Q5W150 140 aa7.93□□□□□ -1.14
DDX54-202ENST00000314045 KRTAP29-1A8MX34 341 aaPredicted RBP7.92□□□□□ -1.14
DDX54-202ENST00000314045 TRRAPQ9Y4A5 3859 aa7.9□□□□□ -1.14
DDX54-202ENST00000314045 NOTCH2NLQ7Z3S9 236 aa7.89□□□□□ -1.15
DDX54-202ENST00000314045 SPINK7P58062 85 aa7.87□□□□□ -1.15
DDX54-202ENST00000314045 ASB16-AS1Q495Z4 193 aa7.87□□□□□ -1.15
DDX54-202ENST00000314045 UQCR11O14957 56 aa7.86□□□□□ -1.15
DDX54-202ENST00000314045 RPS29P62273 56 aaKnown RBP7.8□□□□□ -1.16
DDX54-202ENST00000314045 Q1T7F1 81 aa7.77□□□□□ -1.17
DDX54-202ENST00000314045 SEC61BP60468 96 aaKnown RBP7.76□□□□□ -1.17
DDX54-202ENST00000314045 FBN3Q75N90 2809 aa7.76□□□□□ -1.17
DDX54-202ENST00000314045 MIR22HGQ0VDD5 57 aa7.75□□□□□ -1.17
DDX54-202ENST00000314045 KRTAP1-4P0C5Y4 121 aa7.73□□□□□ -1.17
DDX54-202ENST00000314045 VPS13CQ709C8 3753 aa7.73□□□□□ -1.17
DDX54-202ENST00000314045 KTN1-AS1Q86SY8 53 aa7.66□□□□□ -1.18
DDX54-202ENST00000314045 DMAC1Q96GE9 116 aa7.65□□□□□ -1.18
DDX54-202ENST00000314045 CSAG1Q6PB30 78 aa7.65□□□□□ -1.18
DDX54-202ENST00000314045 A8MU10 97 aa7.64□□□□□ -1.19
DDX54-202ENST00000314045 LINC01554Q52M75 96 aa7.64□□□□□ -1.19
DDX54-202ENST00000314045 Q5VV11 94 aa7.64□□□□□ -1.19
DDX54-202ENST00000314045 LINC01558Q9Y6Z2 57 aa7.63□□□□□ -1.19
DDX54-202ENST00000314045 ZNF469Q96JG9 3925 aaPredicted RBP7.63□□□□□ -1.19
DDX54-202ENST00000314045 A0A0D9SG42 100 aa7.63□□□□□ -1.19
DDX54-202ENST00000314045 S4R3F8 94 aa7.62□□□□□ -1.19
DDX54-202ENST00000314045 A0A1B0GU33 70 aa7.6□□□□□ -1.19
DDX54-202ENST00000314045 M0R2T5 61 aa7.59□□□□□ -1.19
DDX54-202ENST00000314045 Q75L30 129 aa7.58□□□□□ -1.2
DDX54-202ENST00000314045 MEGF8Q7Z7M0 2845 aa7.58□□□□□ -1.2
DDX54-202ENST00000314045 A0A1B0GVY2 172 aa7.57□□□□□ -1.2
DDX54-202ENST00000314045 CDC42SE1Q9NRR8 79 aa7.57□□□□□ -1.2
DDX54-202ENST00000314045 COL7A1Q02388 2944 aa7.56□□□□□ -1.2
DDX54-202ENST00000314045 SPINT4Q6UDR6 99 aa7.56□□□□□ -1.2
DDX54-202ENST00000314045 RPL37P61927 97 aaKnown RBP7.52□□□□□ -1.21
DDX54-202ENST00000314045 A8MUU9 505 aa7.5□□□□□ -1.21
DDX54-202ENST00000314045 LCA10Q71F78 164 aa7.48□□□□□ -1.21
DDX54-202ENST00000314045 C20orf166-AS1Q96NR2 134 aa7.48□□□□□ -1.21
DDX54-202ENST00000314045 PRAC1Q96KF2 57 aa7.46□□□□□ -1.22
DDX54-202ENST00000314045 AKAP9Q99996 3911 aa7.43□□□□□ -1.22
DDX54-202ENST00000314045 H1FX-AS1Q4G0G2 97 aa7.4□□□□□ -1.22
DDX54-202ENST00000314045 R4GN34 69 aa7.4□□□□□ -1.22
DDX54-202ENST00000314045 CRIPTQ9P021 101 aa7.4□□□□□ -1.22
DDX54-202ENST00000314045 XP32Q5T750 250 aa7.38□□□□□ -1.23
DDX54-202ENST00000314045 KRTAP10-8P60410 259 aa7.36□□□□□ -1.23
DDX54-202ENST00000314045 CAMK2N1Q7Z7J9 78 aa7.36□□□□□ -1.23
DDX54-202ENST00000314045 KRTAP16-1A8MUX0 517 aa7.34□□□□□ -1.23
DDX54-202ENST00000314045 A6NN06 94 aa7.32□□□□□ -1.24
DDX54-202ENST00000314045 ADM2Q7Z4H4 148 aa7.31□□□□□ -1.24
DDX54-202ENST00000314045 HUWE1Q7Z6Z7 4374 aaKnown RBP7.31□□□□□ -1.24
DDX54-202ENST00000314045 M0QZ58 72 aa7.29□□□□□ -1.24
DDX54-202ENST00000314045 TPRXLQ17RH7 258 aa7.28□□□□□ -1.24
DDX54-202ENST00000314045 KRTAP13-3Q3SY46 172 aa7.26□□□□□ -1.25
DDX54-202ENST00000314045 SPATA8Q6RVD6 105 aa7.26□□□□□ -1.25
DDX54-202ENST00000314045 H3BS24 57 aa7.22□□□□□ -1.25
DDX54-202ENST00000314045 DNHD1Q96M86 4753 aa7.15□□□□□ -1.26
DDX54-202ENST00000314045 DNAH9Q9NYC9 4486 aa7.15□□□□□ -1.27
DDX54-202ENST00000314045 ROMO1P60602 79 aa7.03□□□□□ -1.28
DDX54-202ENST00000314045 PLAC4Q8WY50 150 aa7.01□□□□□ -1.29
DDX54-202ENST00000314045 KRTAP10-4P60372 401 aaPredicted RBP7□□□□□ -1.29
DDX54-202ENST00000314045 CSMD3Q7Z407 3707 aa7□□□□□ -1.29
DDX54-202ENST00000314045 MT1HL1P0DM35 61 aa6.97□□□□□ -1.29
DDX54-202ENST00000314045 PLECQ15149 4684 aaKnown RBP6.95□□□□□ -1.3
DDX54-202ENST00000314045 KRTAP4-5Q9BYR2 181 aa6.89□□□□□ -1.31
DDX54-202ENST00000314045 P0C880 135 aa6.84□□□□□ -1.31
DDX54-202ENST00000314045 DNAH5Q8TE73 4624 aa6.84□□□□□ -1.31
DDX54-202ENST00000314045 DNAH1Q9P2D7 4330 aa6.82□□□□□ -1.32
DDX54-202ENST00000314045 DNAH11Q96DT5 4516 aa6.81□□□□□ -1.32
DDX54-202ENST00000314045 PRKDCP78527 4128 aaKnown RBP6.81□□□□□ -1.32
DDX54-202ENST00000314045 H0YAA0 97 aa6.8□□□□□ -1.32
DDX54-202ENST00000314045 KRTAP3-1Q9BYR8 98 aa6.8□□□□□ -1.32
DDX54-202ENST00000314045 ALMS1Q8TCU4 4167 aa6.8□□□□□ -1.32
DDX54-202ENST00000314045 VPS13DQ5THJ4 4388 aa6.8□□□□□ -1.32
DDX54-202ENST00000314045 STARD9Q9P2P6 4700 aa6.77□□□□□ -1.33
DDX54-202ENST00000314045 KRTAP25-1Q3LHN0 102 aa6.76□□□□□ -1.33
DDX54-202ENST00000314045 LUZP6Q538Z0 58 aa6.76□□□□□ -1.33
DDX54-202ENST00000314045 KRTAP10-10P60014 251 aa6.75□□□□□ -1.33
DDX54-202ENST00000314045 ANK2Q01484 3957 aa6.73□□□□□ -1.33
DDX54-202ENST00000314045 DNAH10Q8IVF4 4471 aa6.7□□□□□ -1.34
DDX54-202ENST00000314045 TNP1P09430 55 aa6.65□□□□□ -1.34
DDX54-202ENST00000314045 DNAH17Q9UFH2 4485 aa6.65□□□□□ -1.34
DDX54-202ENST00000314045 DYNC1H1Q14204 4646 aaKnown RBP6.65□□□□□ -1.34
DDX54-202ENST00000314045 FAT1Q14517 4588 aa6.62□□□□□ -1.35
DDX54-202ENST00000314045 LRP1BQ9NZR2 4599 aa6.59□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms