RNA–Protein interactions for RNA: ENST00000313401.3

CDK5R1-201, Transcript of cyclin dependent kinase 5 regulatory subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5R1, Length 4,325 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5R1-201ENST00000313401 NOTCH2NLQ7Z3S9 236 aa11.04□□□□□ -0.64
CDK5R1-201ENST00000313401 Q8N9P0 234 aaPredicted RBP11.04□□□□□ -0.64
CDK5R1-201ENST00000313401 SSBP3-AS1Q7Z2R9 100 aa11.03□□□□□ -0.64
CDK5R1-201ENST00000313401 KTN1-AS1Q86SY8 53 aa11.02□□□□□ -0.65
CDK5R1-201ENST00000313401 IGLV7-46A0A075B6I9 117 aa11.01□□□□□ -0.65
CDK5R1-201ENST00000313401 CSMD3Q7Z407 3707 aa11.01□□□□□ -0.65
CDK5R1-201ENST00000313401 FAM229AH3BQW9 127 aa11.01□□□□□ -0.65
CDK5R1-201ENST00000313401 PLAC8Q9NZF1 115 aa10.99□□□□□ -0.65
CDK5R1-201ENST00000313401 COL7A1Q02388 2944 aa10.99□□□□□ -0.65
CDK5R1-201ENST00000313401 C8orf87E5RJ46 101 aa10.98□□□□□ -0.65
CDK5R1-201ENST00000313401 Q6ZRN7 208 aaPredicted RBP10.98□□□□□ -0.65
CDK5R1-201ENST00000313401 Q5VV11 94 aa10.96□□□□□ -0.66
CDK5R1-201ENST00000313401 KRTAP10-2P60368 255 aa10.94□□□□□ -0.66
CDK5R1-201ENST00000313401 LCE6AA0A183 80 aa10.93□□□□□ -0.66
CDK5R1-201ENST00000313401 HRES1P13985 223 aa10.92□□□□□ -0.66
CDK5R1-201ENST00000313401 C9orf92A6NGG3 77 aa10.9□□□□□ -0.66
CDK5R1-201ENST00000313401 A8MU10 97 aa10.9□□□□□ -0.66
CDK5R1-201ENST00000313401 Q8N1X5 172 aa10.87□□□□□ -0.67
CDK5R1-201ENST00000313401 FBN3Q75N90 2809 aa10.87□□□□□ -0.67
CDK5R1-201ENST00000313401 KRTAP13-1Q8IUC0 172 aa10.86□□□□□ -0.67
CDK5R1-201ENST00000313401 CDC42SE1Q9NRR8 79 aa10.85□□□□□ -0.67
CDK5R1-201ENST00000313401 Q5W150 140 aa10.85□□□□□ -0.67
CDK5R1-201ENST00000313401 UQCR11O14957 56 aa10.85□□□□□ -0.67
CDK5R1-201ENST00000313401 LINC00483Q53H64 154 aa10.84□□□□□ -0.67
CDK5R1-201ENST00000313401 LCA10Q71F78 164 aa10.83□□□□□ -0.68
CDK5R1-201ENST00000313401 SPINT4Q6UDR6 99 aa10.82□□□□□ -0.68
CDK5R1-201ENST00000313401 Q6ZR54 194 aa10.81□□□□□ -0.68
CDK5R1-201ENST00000313401 RBM12B-AS1Q9P1G2 102 aa10.81□□□□□ -0.68
CDK5R1-201ENST00000313401 SPINK7P58062 85 aa10.8□□□□□ -0.68
CDK5R1-201ENST00000313401 KRTAP10-1P60331 282 aa10.8□□□□□ -0.68
CDK5R1-201ENST00000313401 MIR22HGQ0VDD5 57 aa10.79□□□□□ -0.68
CDK5R1-201ENST00000313401 LINC00304Q8N9R0 145 aa10.79□□□□□ -0.68
CDK5R1-201ENST00000313401 Q75L30 129 aa10.76□□□□□ -0.69
CDK5R1-201ENST00000313401 LINC01558Q9Y6Z2 57 aa10.73□□□□□ -0.69
CDK5R1-201ENST00000313401 PRAC1Q96KF2 57 aa10.68□□□□□ -0.7
CDK5R1-201ENST00000313401 H3BS24 57 aa10.66□□□□□ -0.7
CDK5R1-201ENST00000313401 MEGF8Q7Z7M0 2845 aa10.66□□□□□ -0.7
CDK5R1-201ENST00000313401 KRTAP13-2Q52LG2 175 aa10.59□□□□□ -0.71
CDK5R1-201ENST00000313401 DMAC1Q96GE9 116 aa10.51□□□□□ -0.73
CDK5R1-201ENST00000313401 LINC01554Q52M75 96 aa10.48□□□□□ -0.73
CDK5R1-201ENST00000313401 HUWE1Q7Z6Z7 4374 aaKnown RBP10.44□□□□□ -0.74
CDK5R1-201ENST00000313401 ASB16-AS1Q495Z4 193 aa10.41□□□□□ -0.74
CDK5R1-201ENST00000313401 A0A0D9SG42 100 aa10.39□□□□□ -0.75
CDK5R1-201ENST00000313401 CRIPTQ9P021 101 aa10.37□□□□□ -0.75
CDK5R1-201ENST00000313401 DNAH10Q8IVF4 4471 aa10.36□□□□□ -0.75
CDK5R1-201ENST00000313401 CSAG1Q6PB30 78 aa10.34□□□□□ -0.75
CDK5R1-201ENST00000313401 A6NN06 94 aa10.29□□□□□ -0.76
CDK5R1-201ENST00000313401 ANK2Q01484 3957 aa10.29□□□□□ -0.76
CDK5R1-201ENST00000313401 A0A1B0GU33 70 aa10.28□□□□□ -0.76
CDK5R1-201ENST00000313401 ADM2Q7Z4H4 148 aa10.28□□□□□ -0.76
CDK5R1-201ENST00000313401 KRTAP1-4P0C5Y4 121 aa10.27□□□□□ -0.77
CDK5R1-201ENST00000313401 Q6ZSA8 131 aa10.2□□□□□ -0.78
CDK5R1-201ENST00000313401 SPATA8Q6RVD6 105 aa10.16□□□□□ -0.78
CDK5R1-201ENST00000313401 PLECQ15149 4684 aaKnown RBP10.12□□□□□ -0.79
CDK5R1-201ENST00000313401 KRTAP13-3Q3SY46 172 aa10.12□□□□□ -0.79
CDK5R1-201ENST00000313401 KRTAP16-1A8MUX0 517 aa10.11□□□□□ -0.79
CDK5R1-201ENST00000313401 DNAH9Q9NYC9 4486 aa10.09□□□□□ -0.79
CDK5R1-201ENST00000313401 LYSTQ99698 3801 aa10.04□□□□□ -0.8
CDK5R1-201ENST00000313401 Q5VSD8 79 aa10.03□□□□□ -0.8
CDK5R1-201ENST00000313401 KRTAP21-3Q3LHN1 58 aa9.98□□□□□ -0.81
CDK5R1-201ENST00000313401 COX6B2Q6YFQ2 88 aa9.98□□□□□ -0.81
CDK5R1-201ENST00000313401 H1FX-AS1Q4G0G2 97 aa9.98□□□□□ -0.81
CDK5R1-201ENST00000313401 LUZP6Q538Z0 58 aa9.95□□□□□ -0.82
CDK5R1-201ENST00000313401 DNAH1Q9P2D7 4330 aa9.91□□□□□ -0.82
CDK5R1-201ENST00000313401 S4R3F8 94 aa9.9□□□□□ -0.82
CDK5R1-201ENST00000313401 RPS29P62273 56 aaKnown RBP9.89□□□□□ -0.83
CDK5R1-201ENST00000313401 A8MUU9 505 aa9.88□□□□□ -0.83
CDK5R1-201ENST00000313401 STARD9Q9P2P6 4700 aa9.88□□□□□ -0.83
CDK5R1-201ENST00000313401 DNAH11Q96DT5 4516 aa9.87□□□□□ -0.83
CDK5R1-201ENST00000313401 C20orf166-AS1Q96NR2 134 aa9.86□□□□□ -0.83
CDK5R1-201ENST00000313401 J3QL48 77 aa9.81□□□□□ -0.84
CDK5R1-201ENST00000313401 PRKDCP78527 4128 aaKnown RBP9.79□□□□□ -0.84
CDK5R1-201ENST00000313401 RPL37P61927 97 aaKnown RBP9.78□□□□□ -0.84
CDK5R1-201ENST00000313401 H0YAA0 97 aa9.78□□□□□ -0.84
CDK5R1-201ENST00000313401 CMYA5Q8N3K9 4069 aa9.76□□□□□ -0.85
CDK5R1-201ENST00000313401 KMT2AQ03164 3969 aa9.76□□□□□ -0.85
CDK5R1-201ENST00000313401 ROMO1P60602 79 aa9.75□□□□□ -0.85
CDK5R1-201ENST00000313401 DNHD1Q96M86 4753 aa9.75□□□□□ -0.85
CDK5R1-201ENST00000313401 DNAH7Q8WXX0 4024 aa9.72□□□□□ -0.85
CDK5R1-201ENST00000313401 KRTAP25-1Q3LHN0 102 aa9.71□□□□□ -0.85
CDK5R1-201ENST00000313401 VPS13DQ5THJ4 4388 aa9.67□□□□□ -0.86
CDK5R1-201ENST00000313401 DNAH8Q96JB1 4490 aa9.66□□□□□ -0.86
CDK5R1-201ENST00000313401 DNAH3Q8TD57 4116 aa9.65□□□□□ -0.87
CDK5R1-201ENST00000313401 FRAS1Q86XX4 4008 aa9.63□□□□□ -0.87
CDK5R1-201ENST00000313401 CAMK2N1Q7Z7J9 78 aa9.62□□□□□ -0.87
CDK5R1-201ENST00000313401 A0A0A0MQY5 61 aa9.62□□□□□ -0.87
CDK5R1-201ENST00000313401 NDUFAF8A1L188 74 aa9.61□□□□□ -0.87
CDK5R1-201ENST00000313401 KRTAP3-1Q9BYR8 98 aa9.61□□□□□ -0.87
CDK5R1-201ENST00000313401 LRP1BQ9NZR2 4599 aa9.59□□□□□ -0.87
CDK5R1-201ENST00000313401 XP32Q5T750 250 aa9.58□□□□□ -0.88
CDK5R1-201ENST00000313401 DNAH17Q9UFH2 4485 aa9.56□□□□□ -0.88
CDK5R1-201ENST00000313401 R4GN34 69 aa9.55□□□□□ -0.88
CDK5R1-201ENST00000313401 A0A1B0GVY2 172 aa9.55□□□□□ -0.88
CDK5R1-201ENST00000313401 DNAH5Q8TE73 4624 aa9.53□□□□□ -0.88
CDK5R1-201ENST00000313401 M0QZ58 72 aa9.52□□□□□ -0.89
CDK5R1-201ENST00000313401 DNAH2Q9P225 4427 aa9.5□□□□□ -0.89
CDK5R1-201ENST00000313401 FAT1Q14517 4588 aa9.5□□□□□ -0.89
CDK5R1-201ENST00000313401 P0C880 135 aa9.47□□□□□ -0.89
CDK5R1-201ENST00000313401 C10orf95Q9H7T3 257 aa9.45□□□□□ -0.9
CDK5R1-201ENST00000313401 DNAH6Q9C0G6 4158 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms