RNA–Protein interactions for RNA: ENST00000311481.10

RAB1B-201, Transcript of RAB1B, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB1B, Length 2,007 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB1B-201ENST00000311481 CIRBP-AS1Q8TBR5 109 aa12.13□□□□□ -0.47
RAB1B-201ENST00000311481 KMT2CQ8NEZ4 4911 aaKnown RBP12.12□□□□□ -0.47
RAB1B-201ENST00000311481 ALMS1Q8TCU4 4167 aa12.12□□□□□ -0.47
RAB1B-201ENST00000311481 SSBP3-AS1Q7Z2R9 100 aa12.12□□□□□ -0.47
RAB1B-201ENST00000311481 A0A087X002 238 aa12.11□□□□□ -0.47
RAB1B-201ENST00000311481 NOTCH2NLQ7Z3S9 236 aa12.11□□□□□ -0.47
RAB1B-201ENST00000311481 IGLV7-46A0A075B6I9 117 aa12.1□□□□□ -0.47
RAB1B-201ENST00000311481 DNAH5Q8TE73 4624 aa12.09□□□□□ -0.47
RAB1B-201ENST00000311481 NDUFS5O43920 106 aa12.08□□□□□ -0.48
RAB1B-201ENST00000311481 DNAH11Q96DT5 4516 aa12.07□□□□□ -0.48
RAB1B-201ENST00000311481 Q6ZSA8 131 aa12.05□□□□□ -0.48
RAB1B-201ENST00000311481 SPINK6Q6UWN8 80 aa12.03□□□□□ -0.48
RAB1B-201ENST00000311481 V9GYY9 64 aa12.03□□□□□ -0.48
RAB1B-201ENST00000311481 PCOTHQ58A44 107 aa12.02□□□□□ -0.49
RAB1B-201ENST00000311481 BRK1Q8WUW1 75 aa12.01□□□□□ -0.49
RAB1B-201ENST00000311481 KRTAP10-1P60331 282 aa12□□□□□ -0.49
RAB1B-201ENST00000311481 C8orf87E5RJ46 101 aa11.98□□□□□ -0.49
RAB1B-201ENST00000311481 RYR2Q92736 4967 aa11.96□□□□□ -0.49
RAB1B-201ENST00000311481 COA5Q86WW8 74 aa11.96□□□□□ -0.5
RAB1B-201ENST00000311481 KRTAP13-3Q3SY46 172 aa11.95□□□□□ -0.5
RAB1B-201ENST00000311481 KRTAP13-2Q52LG2 175 aa11.95□□□□□ -0.5
RAB1B-201ENST00000311481 C1orf195Q5TG92 126 aa11.95□□□□□ -0.5
RAB1B-201ENST00000311481 PSPHP1O15172 72 aa11.94□□□□□ -0.5
RAB1B-201ENST00000311481 Q8N9P0 234 aaPredicted RBP11.93□□□□□ -0.5
RAB1B-201ENST00000311481 LOC101927531A0A1B0GV80 90 aa11.93□□□□□ -0.5
RAB1B-201ENST00000311481 Q5W150 140 aa11.91□□□□□ -0.5
RAB1B-201ENST00000311481 PKD1P98161 4303 aa11.91□□□□□ -0.5
RAB1B-201ENST00000311481 RYR3Q15413 4870 aa11.91□□□□□ -0.5
RAB1B-201ENST00000311481 LIMD2Q9BT23 127 aa11.89□□□□□ -0.51
RAB1B-201ENST00000311481 A8MUN3 132 aa11.89□□□□□ -0.51
RAB1B-201ENST00000311481 FAT2Q9NYQ8 4349 aa11.87□□□□□ -0.51
RAB1B-201ENST00000311481 LRP1BQ9NZR2 4599 aa11.86□□□□□ -0.51
RAB1B-201ENST00000311481 KRTAP1-4P0C5Y4 121 aa11.86□□□□□ -0.51
RAB1B-201ENST00000311481 LINC00313P59037 77 aa11.85□□□□□ -0.51
RAB1B-201ENST00000311481 Q5VV11 94 aa11.84□□□□□ -0.51
RAB1B-201ENST00000311481 HRES1P13985 223 aa11.81□□□□□ -0.52
RAB1B-201ENST00000311481 FAM229AH3BQW9 127 aa11.76□□□□□ -0.53
RAB1B-201ENST00000311481 PRR15LQ9BU68 103 aa11.76□□□□□ -0.53
RAB1B-201ENST00000311481 KRTAP16-1A8MUX0 517 aa11.74□□□□□ -0.53
RAB1B-201ENST00000311481 LINC01558Q9Y6Z2 57 aa11.72□□□□□ -0.53
RAB1B-201ENST00000311481 Q75L30 129 aa11.7□□□□□ -0.54
RAB1B-201ENST00000311481 CHKB-CPT1BH3BT56 60 aa11.69□□□□□ -0.54
RAB1B-201ENST00000311481 PLA2G1BP04054 148 aaKnown RBP11.69□□□□□ -0.54
RAB1B-201ENST00000311481 PKHD1P08F94 4074 aa11.69□□□□□ -0.54
RAB1B-201ENST00000311481 VPS13BQ7Z7G8 4022 aa11.67□□□□□ -0.54
RAB1B-201ENST00000311481 IGKV2-30P06310 120 aa11.67□□□□□ -0.54
RAB1B-201ENST00000311481 C4orf48Q5BLP8 95 aa11.67□□□□□ -0.54
RAB1B-201ENST00000311481 TYMSOSQ8TAI1 123 aa11.67□□□□□ -0.54
RAB1B-201ENST00000311481 SPAG11AQ6PDA7 123 aa11.66□□□□□ -0.54
RAB1B-201ENST00000311481 SPINK1P00995 79 aa11.65□□□□□ -0.54
RAB1B-201ENST00000311481 ACYP2P14621 99 aa11.64□□□□□ -0.55
RAB1B-201ENST00000311481 DMAC1Q96GE9 116 aa11.63□□□□□ -0.55
RAB1B-201ENST00000311481 RETNLBQ9BQ08 111 aa11.62□□□□□ -0.55
RAB1B-201ENST00000311481 PRR26Q8N8Z3 221 aa11.57□□□□□ -0.56
RAB1B-201ENST00000311481 RPS29P62273 56 aaKnown RBP11.56□□□□□ -0.56
RAB1B-201ENST00000311481 A8MU10 97 aa11.55□□□□□ -0.56
RAB1B-201ENST00000311481 A6NED7 52 aa11.53□□□□□ -0.56
RAB1B-201ENST00000311481 LINC00304Q8N9R0 145 aa11.52□□□□□ -0.56
RAB1B-201ENST00000311481 DYNC1H1Q14204 4646 aaKnown RBP11.52□□□□□ -0.57
RAB1B-201ENST00000311481 A0A1B0GVY2 172 aa11.52□□□□□ -0.57
RAB1B-201ENST00000311481 LCA10Q71F78 164 aa11.52□□□□□ -0.57
RAB1B-201ENST00000311481 EPPK1P58107 5090 aaKnown RBP11.48□□□□□ -0.57
RAB1B-201ENST00000311481 CDC42SE1Q9NRR8 79 aa11.46□□□□□ -0.57
RAB1B-201ENST00000311481 IGKV2D-30A0A075B6S6 120 aa11.45□□□□□ -0.58
RAB1B-201ENST00000311481 SMR3BP02814 79 aaPredicted RBP11.42□□□□□ -0.58
RAB1B-201ENST00000311481 ATP11AUNQ6ZP68 121 aa11.42□□□□□ -0.58
RAB1B-201ENST00000311481 SPINK7P58062 85 aa11.4□□□□□ -0.58
RAB1B-201ENST00000311481 KRTAP10-4P60372 401 aaPredicted RBP11.38□□□□□ -0.59
RAB1B-201ENST00000311481 PMAIP1Q13794 54 aa11.36□□□□□ -0.59
RAB1B-201ENST00000311481 APOBP04114 4563 aaKnown RBP11.36□□□□□ -0.59
RAB1B-201ENST00000311481 C7orf65Q6ZTY9 151 aa11.33□□□□□ -0.6
RAB1B-201ENST00000311481 SPTSSBQ8NFR3 76 aa11.32□□□□□ -0.6
RAB1B-201ENST00000311481 PKHD1L1Q86WI1 4243 aa11.32□□□□□ -0.6
RAB1B-201ENST00000311481 A0A1B0GU69 56 aa11.26□□□□□ -0.61
RAB1B-201ENST00000311481 A8MUU9 505 aa11.26□□□□□ -0.61
RAB1B-201ENST00000311481 C20orf166-AS1Q96NR2 134 aa11.26□□□□□ -0.61
RAB1B-201ENST00000311481 FAT1Q14517 4588 aa11.25□□□□□ -0.61
RAB1B-201ENST00000311481 A6NN06 94 aa11.23□□□□□ -0.61
RAB1B-201ENST00000311481 KIAA1109Q2LD37 5005 aa11.23□□□□□ -0.61
RAB1B-201ENST00000311481 HSPG2P98160 4391 aa11.2□□□□□ -0.62
RAB1B-201ENST00000311481 C9orf92A6NGG3 77 aa11.19□□□□□ -0.62
RAB1B-201ENST00000311481 RYR1P21817 5038 aa11.18□□□□□ -0.62
RAB1B-201ENST00000311481 Q8N1X5 172 aa11.17□□□□□ -0.62
RAB1B-201ENST00000311481 KTN1-AS1Q86SY8 53 aa11.13□□□□□ -0.63
RAB1B-201ENST00000311481 SPATA8Q6RVD6 105 aa11.11□□□□□ -0.63
RAB1B-201ENST00000311481 KRTAP17-1Q9BYP8 105 aa11.07□□□□□ -0.64
RAB1B-201ENST00000311481 UQCR11O14957 56 aa11.06□□□□□ -0.64
RAB1B-201ENST00000311481 BIRC6Q9NR09 4857 aa11.05□□□□□ -0.64
RAB1B-201ENST00000311481 MIR22HGQ0VDD5 57 aa11.02□□□□□ -0.65
RAB1B-201ENST00000311481 FLG2Q5D862 2391 aaPredicted RBP11.01□□□□□ -0.65
RAB1B-201ENST00000311481 KRTAP3-1Q9BYR8 98 aa11.01□□□□□ -0.65
RAB1B-201ENST00000311481 KRTAP10-8P60410 259 aa10.96□□□□□ -0.65
RAB1B-201ENST00000311481 SEC61GP60059 68 aa10.94□□□□□ -0.66
RAB1B-201ENST00000311481 Q5VSD8 79 aa10.91□□□□□ -0.66
RAB1B-201ENST00000311481 FAT3Q8TDW7 4589 aa10.91□□□□□ -0.66
RAB1B-201ENST00000311481 TNXBP22105 4242 aa10.88□□□□□ -0.67
RAB1B-201ENST00000311481 COX6B2Q6YFQ2 88 aa10.86□□□□□ -0.67
RAB1B-201ENST00000311481 HERC2O95714 4834 aa10.86□□□□□ -0.67
RAB1B-201ENST00000311481 KRTAP4-5Q9BYR2 181 aa10.83□□□□□ -0.68
RAB1B-201ENST00000311481 LRP1Q07954 4544 aaKnown RBP10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms