RNA–Protein interactions for RNA: ENST00000311350.7

HERPUD2-201, Transcript of HERPUD family member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HERPUD2, Length 2,474 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-201ENST00000311350 CHTF8P0CG12 524 aa11.45□□□□□ -0.58
HERPUD2-201ENST00000311350 KRTAP13-1Q8IUC0 172 aa11.45□□□□□ -0.58
HERPUD2-201ENST00000311350 HRES1P13985 223 aa11.44□□□□□ -0.58
HERPUD2-201ENST00000311350 EPPK1P58107 5090 aaKnown RBP11.42□□□□□ -0.58
HERPUD2-201ENST00000311350 VPS13DQ5THJ4 4388 aa11.42□□□□□ -0.58
HERPUD2-201ENST00000311350 Q96NJ1 140 aa11.38□□□□□ -0.59
HERPUD2-201ENST00000311350 ASB16-AS1Q495Z4 193 aa11.36□□□□□ -0.59
HERPUD2-201ENST00000311350 Q6ZR54 194 aa11.35□□□□□ -0.59
HERPUD2-201ENST00000311350 PRR26Q8N8Z3 221 aa11.34□□□□□ -0.59
HERPUD2-201ENST00000311350 C8orf17Q9NRJ1 99 aa11.34□□□□□ -0.59
HERPUD2-201ENST00000311350 NBDYA0A0U1RRE5 68 aa11.33□□□□□ -0.6
HERPUD2-201ENST00000311350 LINC00483Q53H64 154 aa11.33□□□□□ -0.6
HERPUD2-201ENST00000311350 TP53AIP1Q9HCN2 124 aa11.33□□□□□ -0.6
HERPUD2-201ENST00000311350 IGHV6-1A0A0B4J1U7 121 aa11.32□□□□□ -0.6
HERPUD2-201ENST00000311350 Q6ZRN7 208 aaPredicted RBP11.32□□□□□ -0.6
HERPUD2-201ENST00000311350 PRAC1Q96KF2 57 aa11.32□□□□□ -0.6
HERPUD2-201ENST00000311350 BIRC6Q9NR09 4857 aa11.32□□□□□ -0.6
HERPUD2-201ENST00000311350 IGLV9-49A0A0B4J1Y8 123 aa11.31□□□□□ -0.6
HERPUD2-201ENST00000311350 FRAS1Q86XX4 4008 aa11.31□□□□□ -0.6
HERPUD2-201ENST00000311350 DNAH6Q9C0G6 4158 aa11.31□□□□□ -0.6
HERPUD2-201ENST00000311350 A0A087X002 238 aa11.3□□□□□ -0.6
HERPUD2-201ENST00000311350 NOTCH2NLQ7Z3S9 236 aa11.3□□□□□ -0.6
HERPUD2-201ENST00000311350 SPACA4Q8TDM5 124 aa11.3□□□□□ -0.6
HERPUD2-201ENST00000311350 PANO1I0J062 215 aa11.28□□□□□ -0.6
HERPUD2-201ENST00000311350 LINC00313P59037 77 aa11.28□□□□□ -0.6
HERPUD2-201ENST00000311350 ZNF706Q9Y5V0 76 aaPredicted RBP11.28□□□□□ -0.6
HERPUD2-201ENST00000311350 ADM2Q7Z4H4 148 aa11.27□□□□□ -0.61
HERPUD2-201ENST00000311350 C8orf87E5RJ46 101 aa11.23□□□□□ -0.61
HERPUD2-201ENST00000311350 A0A1B0GVX0 72 aa11.21□□□□□ -0.61
HERPUD2-201ENST00000311350 MRPL34Q9BQ48 92 aaKnown RBP11.21□□□□□ -0.61
HERPUD2-201ENST00000311350 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.2□□□□□ -0.62
HERPUD2-201ENST00000311350 DNAH2Q9P225 4427 aa11.2□□□□□ -0.62
HERPUD2-201ENST00000311350 Q5W150 140 aa11.19□□□□□ -0.62
HERPUD2-201ENST00000311350 RTL8CO15255 209 aa11.18□□□□□ -0.62
HERPUD2-201ENST00000311350 HECTD4Q9Y4D8 3996 aa11.17□□□□□ -0.62
HERPUD2-201ENST00000311350 FAT2Q9NYQ8 4349 aa11.15□□□□□ -0.62
HERPUD2-201ENST00000311350 C1orf134Q5TEV5 83 aa11.15□□□□□ -0.62
HERPUD2-201ENST00000311350 IGLV5-52A0A0A0MRZ9 124 aa11.14□□□□□ -0.63
HERPUD2-201ENST00000311350 ANAPC11Q9NYG5 84 aa11.14□□□□□ -0.63
HERPUD2-201ENST00000311350 A0A087WTM6 91 aa11.14□□□□□ -0.63
HERPUD2-201ENST00000311350 CDK2AP2O75956 126 aa11.14□□□□□ -0.63
HERPUD2-201ENST00000311350 DNAH17Q9UFH2 4485 aa11.11□□□□□ -0.63
HERPUD2-201ENST00000311350 A0A1B0GVY2 172 aa11.11□□□□□ -0.63
HERPUD2-201ENST00000311350 ZNF861PO60384 105 aa11.11□□□□□ -0.63
HERPUD2-201ENST00000311350 PSORS1C2Q9UIG4 136 aa11.11□□□□□ -0.63
HERPUD2-201ENST00000311350 SPINK6Q6UWN8 80 aa11.07□□□□□ -0.64
HERPUD2-201ENST00000311350 KRTAP13-3Q3SY46 172 aa11.06□□□□□ -0.64
HERPUD2-201ENST00000311350 PKHD1P08F94 4074 aa11.05□□□□□ -0.64
HERPUD2-201ENST00000311350 C4orf48Q5BLP8 95 aa11.05□□□□□ -0.64
HERPUD2-201ENST00000311350 ACYP2P14621 99 aa11.04□□□□□ -0.64
HERPUD2-201ENST00000311350 PLA2G1BP04054 148 aaKnown RBP11.04□□□□□ -0.64
HERPUD2-201ENST00000311350 PKD1P98161 4303 aa11.03□□□□□ -0.64
HERPUD2-201ENST00000311350 DNAH8Q96JB1 4490 aa11.01□□□□□ -0.65
HERPUD2-201ENST00000311350 LINC01554Q52M75 96 aa10.99□□□□□ -0.65
HERPUD2-201ENST00000311350 A0A1B0GU69 56 aa10.99□□□□□ -0.65
HERPUD2-201ENST00000311350 RETNLBQ9BQ08 111 aa10.99□□□□□ -0.65
HERPUD2-201ENST00000311350 DNAH11Q96DT5 4516 aa10.97□□□□□ -0.65
HERPUD2-201ENST00000311350 DYNC1H1Q14204 4646 aaKnown RBP10.97□□□□□ -0.65
HERPUD2-201ENST00000311350 HERC2O95714 4834 aa10.96□□□□□ -0.66
HERPUD2-201ENST00000311350 KIAA1109Q2LD37 5005 aa10.95□□□□□ -0.66
HERPUD2-201ENST00000311350 SPATA8Q6RVD6 105 aa10.95□□□□□ -0.66
HERPUD2-201ENST00000311350 DMAC1Q96GE9 116 aa10.95□□□□□ -0.66
HERPUD2-201ENST00000311350 IGLV7-43P04211 117 aa10.94□□□□□ -0.66
HERPUD2-201ENST00000311350 SSBP3-AS1Q7Z2R9 100 aa10.93□□□□□ -0.66
HERPUD2-201ENST00000311350 MIR22HGQ0VDD5 57 aa10.9□□□□□ -0.67
HERPUD2-201ENST00000311350 KRTAP10-2P60368 255 aa10.86□□□□□ -0.67
HERPUD2-201ENST00000311350 LRP1BQ9NZR2 4599 aa10.85□□□□□ -0.67
HERPUD2-201ENST00000311350 CSAG1Q6PB30 78 aa10.84□□□□□ -0.67
HERPUD2-201ENST00000311350 H3BS24 57 aa10.83□□□□□ -0.68
HERPUD2-201ENST00000311350 CIRBP-AS1Q8TBR5 109 aa10.83□□□□□ -0.68
HERPUD2-201ENST00000311350 UQCR11O14957 56 aa10.82□□□□□ -0.68
HERPUD2-201ENST00000311350 RYR1P21817 5038 aa10.81□□□□□ -0.68
HERPUD2-201ENST00000311350 DNAH5Q8TE73 4624 aa10.78□□□□□ -0.68
HERPUD2-201ENST00000311350 FAM229AH3BQW9 127 aa10.78□□□□□ -0.68
HERPUD2-201ENST00000311350 HSPG2P98160 4391 aa10.77□□□□□ -0.69
HERPUD2-201ENST00000311350 IGKV2-30P06310 120 aa10.76□□□□□ -0.69
HERPUD2-201ENST00000311350 APOBP04114 4563 aaKnown RBP10.74□□□□□ -0.69
HERPUD2-201ENST00000311350 PCLOQ9Y6V0 5065 aa10.7□□□□□ -0.7
HERPUD2-201ENST00000311350 KRTAP17-1Q9BYP8 105 aa10.69□□□□□ -0.7
HERPUD2-201ENST00000311350 KRTAP10-1P60331 282 aa10.68□□□□□ -0.7
HERPUD2-201ENST00000311350 IGKV2D-30A0A075B6S6 120 aa10.67□□□□□ -0.7
HERPUD2-201ENST00000311350 KRTAP4-5Q9BYR2 181 aa10.67□□□□□ -0.7
HERPUD2-201ENST00000311350 KRTAP13-2Q52LG2 175 aa10.65□□□□□ -0.7
HERPUD2-201ENST00000311350 Q8N1X5 172 aa10.65□□□□□ -0.7
HERPUD2-201ENST00000311350 KRTAP16-1A8MUX0 517 aa10.64□□□□□ -0.71
HERPUD2-201ENST00000311350 SPINK1P00995 79 aa10.63□□□□□ -0.71
HERPUD2-201ENST00000311350 Q6ZSA8 131 aa10.62□□□□□ -0.71
HERPUD2-201ENST00000311350 ABCA13Q86UQ4 5058 aa10.62□□□□□ -0.71
HERPUD2-201ENST00000311350 FAT1Q14517 4588 aa10.53□□□□□ -0.72
HERPUD2-201ENST00000311350 KRTAP1-4P0C5Y4 121 aa10.53□□□□□ -0.72
HERPUD2-201ENST00000311350 SMR3BP02814 79 aaPredicted RBP10.51□□□□□ -0.73
HERPUD2-201ENST00000311350 Q5VSD8 79 aa10.5□□□□□ -0.73
HERPUD2-201ENST00000311350 H0YAA0 97 aa10.45□□□□□ -0.74
HERPUD2-201ENST00000311350 A8MUU9 505 aa10.43□□□□□ -0.74
HERPUD2-201ENST00000311350 LINC00304Q8N9R0 145 aa10.41□□□□□ -0.74
HERPUD2-201ENST00000311350 RPS29P62273 56 aaKnown RBP10.4□□□□□ -0.75
HERPUD2-201ENST00000311350 KRTAP25-1Q3LHN0 102 aa10.4□□□□□ -0.75
HERPUD2-201ENST00000311350 VPS13BQ7Z7G8 4022 aa10.39□□□□□ -0.75
HERPUD2-201ENST00000311350 FLG2Q5D862 2391 aaPredicted RBP10.39□□□□□ -0.75
HERPUD2-201ENST00000311350 TYMSOSQ8TAI1 123 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms