RNA–Protein interactions for RNA: ENST00000309877.11

IRF3-201, Transcript of interferon regulatory factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IRF3, Length 1,691 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-201ENST00000309877 MT1HL1P0DM35 61 aa12.77□□□□□ -0.37
IRF3-201ENST00000309877 TNXBP22105 4242 aa12.74□□□□□ -0.37
IRF3-201ENST00000309877 WFDC13Q8IUB5 93 aa12.72□□□□□ -0.37
IRF3-201ENST00000309877 HERC2O95714 4834 aa12.71□□□□□ -0.37
IRF3-201ENST00000309877 ATOX1O00244 68 aa12.71□□□□□ -0.37
IRF3-201ENST00000309877 C8orf17Q9NRJ1 99 aa12.71□□□□□ -0.37
IRF3-201ENST00000309877 MMP24-AS1A0A0U1RRL7 71 aa12.7□□□□□ -0.38
IRF3-201ENST00000309877 CASC2Q6XLA1 102 aa12.69□□□□□ -0.38
IRF3-201ENST00000309877 MYCBP2O75592 4640 aa12.68□□□□□ -0.38
IRF3-201ENST00000309877 KRTAP29-1A8MX34 341 aaPredicted RBP12.68□□□□□ -0.38
IRF3-201ENST00000309877 RETNLBQ9BQ08 111 aa12.67□□□□□ -0.38
IRF3-201ENST00000309877 ANAPC13Q9BS18 74 aa12.67□□□□□ -0.38
IRF3-201ENST00000309877 hDV103S1A0JD37 113 aa12.66□□□□□ -0.38
IRF3-201ENST00000309877 C8orf87E5RJ46 101 aa12.66□□□□□ -0.38
IRF3-201ENST00000309877 NOTCH2NLQ7Z3S9 236 aa12.65□□□□□ -0.38
IRF3-201ENST00000309877 LINC00313P59037 77 aa12.63□□□□□ -0.39
IRF3-201ENST00000309877 SMIM20Q8N5G0 67 aa12.6□□□□□ -0.39
IRF3-201ENST00000309877 PCP4P48539 62 aa12.58□□□□□ -0.4
IRF3-201ENST00000309877 ABCA13Q86UQ4 5058 aa12.57□□□□□ -0.4
IRF3-201ENST00000309877 TMEM254Q8TBM7 123 aa12.57□□□□□ -0.4
IRF3-201ENST00000309877 J3QL48 77 aa12.55□□□□□ -0.4
IRF3-201ENST00000309877 MRPL34Q9BQ48 92 aaKnown RBP12.55□□□□□ -0.4
IRF3-201ENST00000309877 DMBT1Q9UGM3 2413 aaPredicted RBP12.55□□□□□ -0.4
IRF3-201ENST00000309877 SERP2Q8N6R1 65 aa12.54□□□□□ -0.4
IRF3-201ENST00000309877 TRAV7A0A075B6U4 112 aa12.53□□□□□ -0.4
IRF3-201ENST00000309877 FP248Q71RG6 208 aaPredicted RBP12.52□□□□□ -0.4
IRF3-201ENST00000309877 OCR1Q9BZK8 76 aa12.52□□□□□ -0.4
IRF3-201ENST00000309877 NDUFS5O43920 106 aa12.5□□□□□ -0.41
IRF3-201ENST00000309877 C9orf92A6NGG3 77 aa12.46□□□□□ -0.41
IRF3-201ENST00000309877 COX7CP15954 63 aa12.46□□□□□ -0.41
IRF3-201ENST00000309877 KRTAP16-1A8MUX0 517 aa12.45□□□□□ -0.42
IRF3-201ENST00000309877 IGLV7-46A0A075B6I9 117 aa12.44□□□□□ -0.42
IRF3-201ENST00000309877 TP53AIP1Q9HCN2 124 aa12.43□□□□□ -0.42
IRF3-201ENST00000309877 UQCRQO14949 82 aa12.42□□□□□ -0.42
IRF3-201ENST00000309877 PRR4Q16378 134 aa12.41□□□□□ -0.42
IRF3-201ENST00000309877 Q8N9P0 234 aaPredicted RBP12.4□□□□□ -0.42
IRF3-201ENST00000309877 CCDC179H3BU77 68 aa12.36□□□□□ -0.43
IRF3-201ENST00000309877 C5orf47Q569G3 176 aa12.35□□□□□ -0.43
IRF3-201ENST00000309877 C20orf197Q8N268 126 aa12.32□□□□□ -0.44
IRF3-201ENST00000309877 MP68P56378 58 aa12.3□□□□□ -0.44
IRF3-201ENST00000309877 TRAV22A0A0B4J277 110 aa12.29□□□□□ -0.44
IRF3-201ENST00000309877 H0Y9P7 68 aa12.29□□□□□ -0.44
IRF3-201ENST00000309877 KRTAP13-3Q3SY46 172 aa12.29□□□□□ -0.44
IRF3-201ENST00000309877 C20orf166-AS1Q96NR2 134 aa12.27□□□□□ -0.45
IRF3-201ENST00000309877 A8MUU9 505 aa12.26□□□□□ -0.45
IRF3-201ENST00000309877 Q5W150 140 aa12.24□□□□□ -0.45
IRF3-201ENST00000309877 SNURFQ9Y675 71 aa12.24□□□□□ -0.45
IRF3-201ENST00000309877 LINC00208Q96KT6 92 aa12.22□□□□□ -0.45
IRF3-201ENST00000309877 A0A0U1RQV1 116 aa12.21□□□□□ -0.45
IRF3-201ENST00000309877 H3BPC8 53 aa12.2□□□□□ -0.46
IRF3-201ENST00000309877 TPRXLQ17RH7 258 aa12.2□□□□□ -0.46
IRF3-201ENST00000309877 KLKP1Q107X0 134 aa12.19□□□□□ -0.46
IRF3-201ENST00000309877 Q75L30 129 aa12.19□□□□□ -0.46
IRF3-201ENST00000309877 XP32Q5T750 250 aa12.18□□□□□ -0.46
IRF3-201ENST00000309877 C1orf64Q8NEQ6 169 aa12.18□□□□□ -0.46
IRF3-201ENST00000309877 PCLOQ9Y6V0 5065 aa12.16□□□□□ -0.46
IRF3-201ENST00000309877 ZCCHC13Q8WW36 166 aaKnown RBP12.16□□□□□ -0.46
IRF3-201ENST00000309877 CYSTM1Q9H1C7 97 aa12.12□□□□□ -0.47
IRF3-201ENST00000309877 RPL37P61927 97 aaKnown RBP12.1□□□□□ -0.47
IRF3-201ENST00000309877 LOC101927531A0A1B0GV80 90 aa12.09□□□□□ -0.47
IRF3-201ENST00000309877 NDUFC1O43677 76 aa12.07□□□□□ -0.48
IRF3-201ENST00000309877 ATP11AUNQ6ZP68 121 aa12.07□□□□□ -0.48
IRF3-201ENST00000309877 H7BZZ5 65 aa12.02□□□□□ -0.49
IRF3-201ENST00000309877 IGKV2-30P06310 120 aa12.02□□□□□ -0.49
IRF3-201ENST00000309877 IGKV2D-30A0A075B6S6 120 aa12□□□□□ -0.49
IRF3-201ENST00000309877 CYP4F30PQ9H0H9 118 aa12□□□□□ -0.49
IRF3-201ENST00000309877 PCOTHQ58A44 107 aa11.97□□□□□ -0.49
IRF3-201ENST00000309877 C7orf65Q6ZTY9 151 aa11.94□□□□□ -0.5
IRF3-201ENST00000309877 LPAP08519 4548 aa11.94□□□□□ -0.5
IRF3-201ENST00000309877 TMEM258P61165 79 aa11.91□□□□□ -0.5
IRF3-201ENST00000309877 SPINK7P58062 85 aa11.87□□□□□ -0.51
IRF3-201ENST00000309877 HERC1Q15751 4861 aa11.87□□□□□ -0.51
IRF3-201ENST00000309877 LRP2P98164 4655 aa11.83□□□□□ -0.52
IRF3-201ENST00000309877 FAM236DA0A1B0GTK5 79 aa11.83□□□□□ -0.52
IRF3-201ENST00000309877 FAM236CP0DP71 79 aa11.83□□□□□ -0.52
IRF3-201ENST00000309877 SEC61BP60468 96 aaKnown RBP11.82□□□□□ -0.52
IRF3-201ENST00000309877 HRES1P13985 223 aa11.81□□□□□ -0.52
IRF3-201ENST00000309877 SPANXA2-OT1Q8N9U9 137 aa11.81□□□□□ -0.52
IRF3-201ENST00000309877 ATP5EP56381 51 aaPredicted RBP11.78□□□□□ -0.52
IRF3-201ENST00000309877 HMCN2Q8NDA2 5059 aa11.73□□□□□ -0.53
IRF3-201ENST00000309877 C4orf26Q17RF5 130 aa11.68□□□□□ -0.54
IRF3-201ENST00000309877 DMAC1Q96GE9 116 aa11.6□□□□□ -0.55
IRF3-201ENST00000309877 MUC17Q685J3 4493 aa11.56□□□□□ -0.56
IRF3-201ENST00000309877 ACYP2P14621 99 aa11.55□□□□□ -0.56
IRF3-201ENST00000309877 SERP1Q9Y6X1 66 aa11.55□□□□□ -0.56
IRF3-201ENST00000309877 COX6B2Q6YFQ2 88 aa11.55□□□□□ -0.56
IRF3-201ENST00000309877 A8MUN3 132 aa11.53□□□□□ -0.56
IRF3-201ENST00000309877 KRTAP4-1Q9BYQ7 146 aa11.51□□□□□ -0.57
IRF3-201ENST00000309877 COA5Q86WW8 74 aa11.48□□□□□ -0.57
IRF3-201ENST00000309877 KRTAP3-1Q9BYR8 98 aa11.48□□□□□ -0.57
IRF3-201ENST00000309877 RBM12B-AS1Q9P1G2 102 aa11.48□□□□□ -0.57
IRF3-201ENST00000309877 RPS28P62857 69 aaKnown RBP11.46□□□□□ -0.58
IRF3-201ENST00000309877 MPLKIPQ8TAP9 179 aa11.45□□□□□ -0.58
IRF3-201ENST00000309877 CHKB-CPT1BH3BT56 60 aa11.4□□□□□ -0.59
IRF3-201ENST00000309877 H1FX-AS1Q4G0G2 97 aa11.31□□□□□ -0.6
IRF3-201ENST00000309877 SMIM26A0A096LP01 95 aa11.24□□□□□ -0.61
IRF3-201ENST00000309877 S4R3F8 94 aa11.22□□□□□ -0.61
IRF3-201ENST00000309877 SPTSSBQ8NFR3 76 aa11.19□□□□□ -0.62
IRF3-201ENST00000309877 UBR4Q5T4S7 5183 aa11.18□□□□□ -0.62
IRF3-201ENST00000309877 MUC2Q02817 5179 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 220.6 ms