RNA–Protein interactions for RNA: ENST00000309602.4

LRFN4-201, Transcript of leucine rich repeat and fibronectin type III domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRFN4, Length 2,431 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN4-201ENST00000309602 HYDINQ4G0P3 5121 aa11.69□□□□□ -0.54
LRFN4-201ENST00000309602 CDK2AP2O75956 126 aa11.67□□□□□ -0.54
LRFN4-201ENST00000309602 A0A087X002 238 aa11.65□□□□□ -0.55
LRFN4-201ENST00000309602 NOTCH2NLQ7Z3S9 236 aa11.65□□□□□ -0.55
LRFN4-201ENST00000309602 TP53AIP1Q9HCN2 124 aa11.63□□□□□ -0.55
LRFN4-201ENST00000309602 PMAIP1Q13794 54 aa11.62□□□□□ -0.55
LRFN4-201ENST00000309602 SPANXA2-OT1Q8N9U9 137 aa11.62□□□□□ -0.55
LRFN4-201ENST00000309602 KRTAP10-1P60331 282 aa11.61□□□□□ -0.55
LRFN4-201ENST00000309602 SPINK6Q6UWN8 80 aa11.6□□□□□ -0.55
LRFN4-201ENST00000309602 Q6ZSA8 131 aa11.6□□□□□ -0.55
LRFN4-201ENST00000309602 PKD1P98161 4303 aa11.6□□□□□ -0.55
LRFN4-201ENST00000309602 NDUFS5O43920 106 aa11.59□□□□□ -0.55
LRFN4-201ENST00000309602 MRPL34Q9BQ48 92 aaKnown RBP11.59□□□□□ -0.55
LRFN4-201ENST00000309602 SSBP3-AS1Q7Z2R9 100 aa11.58□□□□□ -0.56
LRFN4-201ENST00000309602 CD164Q04900 197 aa11.58□□□□□ -0.56
LRFN4-201ENST00000309602 FAT2Q9NYQ8 4349 aa11.58□□□□□ -0.56
LRFN4-201ENST00000309602 LRP1BQ9NZR2 4599 aa11.56□□□□□ -0.56
LRFN4-201ENST00000309602 SACSQ9NZJ4 4579 aa11.56□□□□□ -0.56
LRFN4-201ENST00000309602 Q1T7F1 81 aa11.53□□□□□ -0.56
LRFN4-201ENST00000309602 PCOTHQ58A44 107 aa11.52□□□□□ -0.57
LRFN4-201ENST00000309602 KRTAP13-2Q52LG2 175 aa11.51□□□□□ -0.57
LRFN4-201ENST00000309602 PSPHP1O15172 72 aa11.49□□□□□ -0.57
LRFN4-201ENST00000309602 IGLV7-46A0A075B6I9 117 aa11.48□□□□□ -0.57
LRFN4-201ENST00000309602 A8MU10 97 aa11.44□□□□□ -0.58
LRFN4-201ENST00000309602 KMT2CQ8NEZ4 4911 aaKnown RBP11.42□□□□□ -0.58
LRFN4-201ENST00000309602 KRTAP1-4P0C5Y4 121 aa11.42□□□□□ -0.58
LRFN4-201ENST00000309602 Q5W150 140 aa11.42□□□□□ -0.58
LRFN4-201ENST00000309602 C8orf87E5RJ46 101 aa11.4□□□□□ -0.58
LRFN4-201ENST00000309602 KRTAP13-3Q3SY46 172 aa11.39□□□□□ -0.59
LRFN4-201ENST00000309602 VPS13BQ7Z7G8 4022 aa11.39□□□□□ -0.59
LRFN4-201ENST00000309602 COA5Q86WW8 74 aa11.38□□□□□ -0.59
LRFN4-201ENST00000309602 A8MUN3 132 aa11.36□□□□□ -0.59
LRFN4-201ENST00000309602 Q8N9P0 234 aaPredicted RBP11.35□□□□□ -0.59
LRFN4-201ENST00000309602 LINC00313P59037 77 aa11.35□□□□□ -0.59
LRFN4-201ENST00000309602 LOC101927531A0A1B0GV80 90 aa11.34□□□□□ -0.59
LRFN4-201ENST00000309602 PKHD1P08F94 4074 aa11.3□□□□□ -0.6
LRFN4-201ENST00000309602 Q5VV11 94 aa11.3□□□□□ -0.6
LRFN4-201ENST00000309602 RYR2Q92736 4967 aa11.29□□□□□ -0.6
LRFN4-201ENST00000309602 PLA2G1BP04054 148 aaKnown RBP11.28□□□□□ -0.6
LRFN4-201ENST00000309602 LIMD2Q9BT23 127 aa11.27□□□□□ -0.6
LRFN4-201ENST00000309602 HRES1P13985 223 aa11.25□□□□□ -0.61
LRFN4-201ENST00000309602 TYMSOSQ8TAI1 123 aa11.24□□□□□ -0.61
LRFN4-201ENST00000309602 KRTAP16-1A8MUX0 517 aa11.24□□□□□ -0.61
LRFN4-201ENST00000309602 RETNLBQ9BQ08 111 aa11.23□□□□□ -0.61
LRFN4-201ENST00000309602 FAM229AH3BQW9 127 aa11.21□□□□□ -0.61
LRFN4-201ENST00000309602 C4orf48Q5BLP8 95 aa11.2□□□□□ -0.62
LRFN4-201ENST00000309602 RBM12B-AS1Q9P1G2 102 aa11.2□□□□□ -0.62
LRFN4-201ENST00000309602 KTN1-AS1Q86SY8 53 aa11.19□□□□□ -0.62
LRFN4-201ENST00000309602 PRR15LQ9BU68 103 aa11.19□□□□□ -0.62
LRFN4-201ENST00000309602 DYNC1H1Q14204 4646 aaKnown RBP11.16□□□□□ -0.62
LRFN4-201ENST00000309602 SPINK1P00995 79 aa11.16□□□□□ -0.62
LRFN4-201ENST00000309602 RYR3Q15413 4870 aa11.16□□□□□ -0.62
LRFN4-201ENST00000309602 CHKB-CPT1BH3BT56 60 aa11.16□□□□□ -0.62
LRFN4-201ENST00000309602 PRR26Q8N8Z3 221 aa11.14□□□□□ -0.63
LRFN4-201ENST00000309602 IGKV2-30P06310 120 aa11.13□□□□□ -0.63
LRFN4-201ENST00000309602 SPAG11AQ6PDA7 123 aa11.13□□□□□ -0.63
LRFN4-201ENST00000309602 SMR3BP02814 79 aaPredicted RBP11.13□□□□□ -0.63
LRFN4-201ENST00000309602 LCA10Q71F78 164 aa11.12□□□□□ -0.63
LRFN4-201ENST00000309602 SPTSSBQ8NFR3 76 aa11.11□□□□□ -0.63
LRFN4-201ENST00000309602 LINC00304Q8N9R0 145 aa11.09□□□□□ -0.63
LRFN4-201ENST00000309602 LINC01558Q9Y6Z2 57 aa11.09□□□□□ -0.63
LRFN4-201ENST00000309602 A0A1B0GVY2 172 aa11.08□□□□□ -0.64
LRFN4-201ENST00000309602 Q75L30 129 aa11.07□□□□□ -0.64
LRFN4-201ENST00000309602 A6NN06 94 aa11.06□□□□□ -0.64
LRFN4-201ENST00000309602 ACYP2P14621 99 aa11.06□□□□□ -0.64
LRFN4-201ENST00000309602 DMAC1Q96GE9 116 aa11.06□□□□□ -0.64
LRFN4-201ENST00000309602 ATP11AUNQ6ZP68 121 aa11.04□□□□□ -0.64
LRFN4-201ENST00000309602 APOBP04114 4563 aaKnown RBP11.02□□□□□ -0.65
LRFN4-201ENST00000309602 RPS29P62273 56 aaKnown RBP11.02□□□□□ -0.65
LRFN4-201ENST00000309602 FAT1Q14517 4588 aa11.02□□□□□ -0.65
LRFN4-201ENST00000309602 IGKV2D-30A0A075B6S6 120 aa11.01□□□□□ -0.65
LRFN4-201ENST00000309602 KRTAP10-4P60372 401 aaPredicted RBP11□□□□□ -0.65
LRFN4-201ENST00000309602 A6NED7 52 aa10.98□□□□□ -0.65
LRFN4-201ENST00000309602 PKHD1L1Q86WI1 4243 aa10.92□□□□□ -0.66
LRFN4-201ENST00000309602 CDC42SE1Q9NRR8 79 aa10.92□□□□□ -0.66
LRFN4-201ENST00000309602 C7orf65Q6ZTY9 151 aa10.89□□□□□ -0.67
LRFN4-201ENST00000309602 SPINK7P58062 85 aa10.86□□□□□ -0.67
LRFN4-201ENST00000309602 C9orf92A6NGG3 77 aa10.84□□□□□ -0.67
LRFN4-201ENST00000309602 EPPK1P58107 5090 aaKnown RBP10.77□□□□□ -0.69
LRFN4-201ENST00000309602 A8MUU9 505 aa10.77□□□□□ -0.69
LRFN4-201ENST00000309602 C20orf166-AS1Q96NR2 134 aa10.77□□□□□ -0.69
LRFN4-201ENST00000309602 Q8N1X5 172 aa10.74□□□□□ -0.69
LRFN4-201ENST00000309602 A0A1B0GU69 56 aa10.72□□□□□ -0.69
LRFN4-201ENST00000309602 HSPG2P98160 4391 aa10.71□□□□□ -0.7
LRFN4-201ENST00000309602 PRAC1Q96KF2 57 aa10.67□□□□□ -0.7
LRFN4-201ENST00000309602 FLG2Q5D862 2391 aaPredicted RBP10.66□□□□□ -0.7
LRFN4-201ENST00000309602 KIAA1109Q2LD37 5005 aa10.66□□□□□ -0.7
LRFN4-201ENST00000309602 ADM2Q7Z4H4 148 aa10.6□□□□□ -0.71
LRFN4-201ENST00000309602 RYR1P21817 5038 aa10.6□□□□□ -0.71
LRFN4-201ENST00000309602 LRP1Q07954 4544 aaKnown RBP10.6□□□□□ -0.71
LRFN4-201ENST00000309602 TNXBP22105 4242 aa10.58□□□□□ -0.72
LRFN4-201ENST00000309602 FAT3Q8TDW7 4589 aa10.57□□□□□ -0.72
LRFN4-201ENST00000309602 KRTAP10-8P60410 259 aa10.56□□□□□ -0.72
LRFN4-201ENST00000309602 Q5VSD8 79 aa10.56□□□□□ -0.72
LRFN4-201ENST00000309602 KRTAP3-1Q9BYR8 98 aa10.55□□□□□ -0.72
LRFN4-201ENST00000309602 KRTAP17-1Q9BYP8 105 aa10.54□□□□□ -0.72
LRFN4-201ENST00000309602 SPATA8Q6RVD6 105 aa10.5□□□□□ -0.73
LRFN4-201ENST00000309602 H3BS24 57 aa10.5□□□□□ -0.73
LRFN4-201ENST00000309602 UQCR11O14957 56 aa10.49□□□□□ -0.73
LRFN4-201ENST00000309602 LINC01554Q52M75 96 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms