RNA–Protein interactions for RNA: ENST00000307142.8

SYNPO2-201, Transcript of synaptopodin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNPO2, Length 7,295 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-201ENST00000307142 DMBT1Q9UGM3 2413 aaPredicted RBP6.16□□□□□ -1.42
SYNPO2-201ENST00000307142 M0QZ58 72 aa6.16□□□□□ -1.42
SYNPO2-201ENST00000307142 CELSR2Q9HCU4 2923 aa6.16□□□□□ -1.42
SYNPO2-201ENST00000307142 RPS29P62273 56 aaKnown RBP6.14□□□□□ -1.43
SYNPO2-201ENST00000307142 ADM2Q7Z4H4 148 aa6.14□□□□□ -1.43
SYNPO2-201ENST00000307142 HRNRQ86YZ3 2850 aaPredicted RBP6.12□□□□□ -1.43
SYNPO2-201ENST00000307142 KRTAP13-2Q52LG2 175 aa6.1□□□□□ -1.43
SYNPO2-201ENST00000307142 Q1T7F1 81 aa6.1□□□□□ -1.43
SYNPO2-201ENST00000307142 KRTAP7-1Q8IUC3 87 aa6.08□□□□□ -1.44
SYNPO2-201ENST00000307142 H1FX-AS1Q4G0G2 97 aa6.08□□□□□ -1.44
SYNPO2-201ENST00000307142 Q75L30 129 aa6.07□□□□□ -1.44
SYNPO2-201ENST00000307142 ZANQ9Y493 2812 aa6.07□□□□□ -1.44
SYNPO2-201ENST00000307142 DCHS2Q6V1P9 2916 aa6.07□□□□□ -1.44
SYNPO2-201ENST00000307142 ASB16-AS1Q495Z4 193 aa6.06□□□□□ -1.44
SYNPO2-201ENST00000307142 NOTCH2NLQ7Z3S9 236 aa6.06□□□□□ -1.44
SYNPO2-201ENST00000307142 ZFHX4Q86UP3 3567 aa6.05□□□□□ -1.44
SYNPO2-201ENST00000307142 NIPBLQ6KC79 2804 aaeCLIP6.05□□□□□ -1.44
SYNPO2-201ENST00000307142 LUZP6Q538Z0 58 aa6.04□□□□□ -1.44
SYNPO2-201ENST00000307142 RPL37P61927 97 aaKnown RBP6.04□□□□□ -1.44
SYNPO2-201ENST00000307142 C20orf166-AS1Q96NR2 134 aa6.04□□□□□ -1.44
SYNPO2-201ENST00000307142 NF1P21359 2839 aa6.01□□□□□ -1.45
SYNPO2-201ENST00000307142 KRTAP13-1Q8IUC0 172 aa6.01□□□□□ -1.45
SYNPO2-201ENST00000307142 CELSR1Q9NYQ6 3014 aa6.01□□□□□ -1.45
SYNPO2-201ENST00000307142 DCHS1Q96JQ0 3298 aa6□□□□□ -1.45
SYNPO2-201ENST00000307142 LINC01558Q9Y6Z2 57 aa6□□□□□ -1.45
SYNPO2-201ENST00000307142 FBN2P35556 2912 aa6□□□□□ -1.45
SYNPO2-201ENST00000307142 MUC3AQ02505 3323 aa5.99□□□□□ -1.45
SYNPO2-201ENST00000307142 ZFHX3Q15911 3703 aa5.98□□□□□ -1.45
SYNPO2-201ENST00000307142 KTN1-AS1Q86SY8 53 aa5.98□□□□□ -1.45
SYNPO2-201ENST00000307142 A8MUU9 505 aa5.96□□□□□ -1.46
SYNPO2-201ENST00000307142 Q5XG85 94 aa5.96□□□□□ -1.46
SYNPO2-201ENST00000307142 SPATA8Q6RVD6 105 aa5.94□□□□□ -1.46
SYNPO2-201ENST00000307142 KRTAP29-1A8MX34 341 aaPredicted RBP5.94□□□□□ -1.46
SYNPO2-201ENST00000307142 TENM1Q9UKZ4 2725 aa5.93□□□□□ -1.46
SYNPO2-201ENST00000307142 SPENQ96T58 3664 aaKnown RBP5.9□□□□□ -1.46
SYNPO2-201ENST00000307142 CSMD1Q96PZ7 3565 aa5.9□□□□□ -1.46
SYNPO2-201ENST00000307142 CYSTM1Q9H1C7 97 aa5.9□□□□□ -1.47
SYNPO2-201ENST00000307142 ROMO1P60602 79 aa5.86□□□□□ -1.47
SYNPO2-201ENST00000307142 SMG1Q96Q15 3661 aaKnown RBP5.86□□□□□ -1.47
SYNPO2-201ENST00000307142 BSNQ9UPA5 3926 aa5.85□□□□□ -1.47
SYNPO2-201ENST00000307142 A0A1B0GVY2 172 aa5.85□□□□□ -1.47
SYNPO2-201ENST00000307142 Q5VV11 94 aa5.85□□□□□ -1.47
SYNPO2-201ENST00000307142 XP32Q5T750 250 aa5.84□□□□□ -1.47
SYNPO2-201ENST00000307142 TENM2Q9NT68 2774 aa5.84□□□□□ -1.48
SYNPO2-201ENST00000307142 KRTAP1-4P0C5Y4 121 aa5.83□□□□□ -1.48
SYNPO2-201ENST00000307142 MXRA5Q9NR99 2828 aa5.82□□□□□ -1.48
SYNPO2-201ENST00000307142 PDZD2O15018 2839 aa5.8□□□□□ -1.48
SYNPO2-201ENST00000307142 TPRXLQ17RH7 258 aa5.8□□□□□ -1.48
SYNPO2-201ENST00000307142 PRAC1Q96KF2 57 aa5.74□□□□□ -1.49
SYNPO2-201ENST00000307142 ANK3Q12955 4377 aaKnown RBP5.74□□□□□ -1.49
SYNPO2-201ENST00000307142 PKD1L1Q8TDX9 2849 aa5.73□□□□□ -1.49
SYNPO2-201ENST00000307142 SVEP1Q4LDE5 3571 aa5.73□□□□□ -1.49
SYNPO2-201ENST00000307142 TENM3Q9P273 2699 aa5.72□□□□□ -1.49
SYNPO2-201ENST00000307142 KRTAP10-10P60014 251 aa5.72□□□□□ -1.49
SYNPO2-201ENST00000307142 A8MU10 97 aa5.71□□□□□ -1.49
SYNPO2-201ENST00000307142 CSMD2Q7Z408 3487 aa5.71□□□□□ -1.5
SYNPO2-201ENST00000307142 KRTAP10-8P60410 259 aa5.67□□□□□ -1.5
SYNPO2-201ENST00000307142 KRTAP13-3Q3SY46 172 aa5.66□□□□□ -1.5
SYNPO2-201ENST00000307142 VWFP04275 2813 aa5.65□□□□□ -1.5
SYNPO2-201ENST00000307142 TNP1P09430 55 aa5.65□□□□□ -1.51
SYNPO2-201ENST00000307142 TRRAPQ9Y4A5 3859 aa5.63□□□□□ -1.51
SYNPO2-201ENST00000307142 OTOGQ6ZRI0 2925 aa5.62□□□□□ -1.51
SYNPO2-201ENST00000307142 VPS13CQ709C8 3753 aa5.56□□□□□ -1.52
SYNPO2-201ENST00000307142 FBN1P35555 2871 aaKnown RBP5.55□□□□□ -1.52
SYNPO2-201ENST00000307142 PRO2289Q9P1D8 64 aa5.54□□□□□ -1.52
SYNPO2-201ENST00000307142 TGP01266 2768 aa5.52□□□□□ -1.53
SYNPO2-201ENST00000307142 A0A0A0MQY5 61 aa5.51□□□□□ -1.53
SYNPO2-201ENST00000307142 CUBNO60494 3623 aa5.51□□□□□ -1.53
SYNPO2-201ENST00000307142 KRTAP16-1A8MUX0 517 aa5.5□□□□□ -1.53
SYNPO2-201ENST00000307142 AKAP9Q99996 3911 aa5.45□□□□□ -1.54
SYNPO2-201ENST00000307142 HUWE1Q7Z6Z7 4374 aaKnown RBP5.42□□□□□ -1.54
SYNPO2-201ENST00000307142 KRTAP25-1Q3LHN0 102 aa5.4□□□□□ -1.54
SYNPO2-201ENST00000307142 ZNF469Q96JG9 3925 aaPredicted RBP5.4□□□□□ -1.54
SYNPO2-201ENST00000307142 C10orf95Q9H7T3 257 aa5.4□□□□□ -1.54
SYNPO2-201ENST00000307142 COL7A1Q02388 2944 aa5.36□□□□□ -1.55
SYNPO2-201ENST00000307142 ALMS1Q8TCU4 4167 aa5.36□□□□□ -1.55
SYNPO2-201ENST00000307142 P0C880 135 aa5.34□□□□□ -1.55
SYNPO2-201ENST00000307142 PP632Q6XCG6 107 aa5.3□□□□□ -1.56
SYNPO2-201ENST00000307142 A6NN06 94 aa5.29□□□□□ -1.56
SYNPO2-201ENST00000307142 H0YAA0 97 aa5.28□□□□□ -1.56
SYNPO2-201ENST00000307142 KRTAP4-5Q9BYR2 181 aa5.25□□□□□ -1.57
SYNPO2-201ENST00000307142 FBN3Q75N90 2809 aa5.21□□□□□ -1.58
SYNPO2-201ENST00000307142 MT1HL1P0DM35 61 aa5.18□□□□□ -1.58
SYNPO2-201ENST00000307142 CSMD3Q7Z407 3707 aa5.18□□□□□ -1.58
SYNPO2-201ENST00000307142 SRRM2Q9UQ35 2752 aaKnown RBP5.18□□□□□ -1.58
SYNPO2-201ENST00000307142 H3BS24 57 aa5.16□□□□□ -1.58
SYNPO2-201ENST00000307142 MEGF8Q7Z7M0 2845 aa5.16□□□□□ -1.58
SYNPO2-201ENST00000307142 NDUFAF8A1L188 74 aa5.11□□□□□ -1.59
SYNPO2-201ENST00000307142 DNAH9Q9NYC9 4486 aa5.11□□□□□ -1.59
SYNPO2-201ENST00000307142 KRTAP12-2P59991 146 aa5.09□□□□□ -1.59
SYNPO2-201ENST00000307142 DNAH1Q9P2D7 4330 aa5.03□□□□□ -1.6
SYNPO2-201ENST00000307142 KRTAP3-1Q9BYR8 98 aa5.02□□□□□ -1.61
SYNPO2-201ENST00000307142 KRTAP10-4P60372 401 aaPredicted RBP5□□□□□ -1.61
SYNPO2-201ENST00000307142 KRTAP13-4Q3LI77 160 aa4.98□□□□□ -1.61
SYNPO2-201ENST00000307142 CMYA5Q8N3K9 4069 aa4.97□□□□□ -1.61
SYNPO2-201ENST00000307142 KRTAP12-1P59990 96 aa4.96□□□□□ -1.62
SYNPO2-201ENST00000307142 DNAH3Q8TD57 4116 aa4.93□□□□□ -1.62
SYNPO2-201ENST00000307142 ANK2Q01484 3957 aa4.89□□□□□ -1.63
SYNPO2-201ENST00000307142 KRTAP15-1Q3LI76 137 aa4.88□□□□□ -1.63
SYNPO2-201ENST00000307142 KMT2AQ03164 3969 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms