RNA–Protein interactions for RNA: ENST00000306320.9

RETREG1-201, Transcript of reticulophagy regulator 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RETREG1, Length 3,268 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG1-201ENST00000306320 LINC01558Q9Y6Z2 57 aa10.87□□□□□ -0.67
RETREG1-201ENST00000306320 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.86□□□□□ -0.67
RETREG1-201ENST00000306320 IGLV8-61A0A075B6I0 122 aa10.85□□□□□ -0.67
RETREG1-201ENST00000306320 FRAS1Q86XX4 4008 aa10.81□□□□□ -0.68
RETREG1-201ENST00000306320 TP53AIP1Q9HCN2 124 aa10.8□□□□□ -0.68
RETREG1-201ENST00000306320 FBN3Q75N90 2809 aa10.79□□□□□ -0.68
RETREG1-201ENST00000306320 MRPL34Q9BQ48 92 aaKnown RBP10.79□□□□□ -0.68
RETREG1-201ENST00000306320 A0A1B0GVX0 72 aa10.76□□□□□ -0.69
RETREG1-201ENST00000306320 C8orf87E5RJ46 101 aa10.76□□□□□ -0.69
RETREG1-201ENST00000306320 CIRBP-AS1Q8TBR5 109 aa10.75□□□□□ -0.69
RETREG1-201ENST00000306320 LY6G6CO95867 125 aa10.74□□□□□ -0.69
RETREG1-201ENST00000306320 C14orf177Q52M58 125 aa10.74□□□□□ -0.69
RETREG1-201ENST00000306320 Q5W150 140 aa10.73□□□□□ -0.69
RETREG1-201ENST00000306320 A0A1B0GU69 56 aa10.73□□□□□ -0.69
RETREG1-201ENST00000306320 NUPR2A6NF83 97 aa10.71□□□□□ -0.69
RETREG1-201ENST00000306320 Q96NJ1 140 aa10.71□□□□□ -0.69
RETREG1-201ENST00000306320 Q6ZRN7 208 aaPredicted RBP10.7□□□□□ -0.7
RETREG1-201ENST00000306320 SPINK1P00995 79 aa10.69□□□□□ -0.7
RETREG1-201ENST00000306320 DNAH2Q9P225 4427 aa10.69□□□□□ -0.7
RETREG1-201ENST00000306320 C4orf48Q5BLP8 95 aa10.69□□□□□ -0.7
RETREG1-201ENST00000306320 A0A087WTM6 91 aa10.68□□□□□ -0.7
RETREG1-201ENST00000306320 VPS13DQ5THJ4 4388 aa10.68□□□□□ -0.7
RETREG1-201ENST00000306320 RTL8CO15255 209 aa10.67□□□□□ -0.7
RETREG1-201ENST00000306320 ACYP2P14621 99 aa10.66□□□□□ -0.7
RETREG1-201ENST00000306320 SPRR1BP22528 89 aa10.65□□□□□ -0.7
RETREG1-201ENST00000306320 Q6ZR54 194 aa10.65□□□□□ -0.7
RETREG1-201ENST00000306320 FLG2Q5D862 2391 aaPredicted RBP10.64□□□□□ -0.71
RETREG1-201ENST00000306320 PSORS1C2Q9UIG4 136 aa10.63□□□□□ -0.71
RETREG1-201ENST00000306320 H3BS24 57 aa10.61□□□□□ -0.71
RETREG1-201ENST00000306320 PLAC8Q9NZF1 115 aa10.61□□□□□ -0.71
RETREG1-201ENST00000306320 IGKV2D-30A0A075B6S6 120 aa10.6□□□□□ -0.71
RETREG1-201ENST00000306320 IGKV2-30P06310 120 aa10.6□□□□□ -0.71
RETREG1-201ENST00000306320 IGLV5-52A0A0A0MRZ9 124 aa10.6□□□□□ -0.71
RETREG1-201ENST00000306320 DNAH6Q9C0G6 4158 aa10.59□□□□□ -0.71
RETREG1-201ENST00000306320 SPACA4Q8TDM5 124 aa10.59□□□□□ -0.71
RETREG1-201ENST00000306320 LINC01554Q52M75 96 aa10.59□□□□□ -0.71
RETREG1-201ENST00000306320 HECTD4Q9Y4D8 3996 aa10.58□□□□□ -0.72
RETREG1-201ENST00000306320 DNAH17Q9UFH2 4485 aa10.58□□□□□ -0.72
RETREG1-201ENST00000306320 MIR22HGQ0VDD5 57 aa10.56□□□□□ -0.72
RETREG1-201ENST00000306320 DNAH8Q96JB1 4490 aa10.56□□□□□ -0.72
RETREG1-201ENST00000306320 DYNC2H1Q8NCM8 4307 aaKnown RBP10.56□□□□□ -0.72
RETREG1-201ENST00000306320 CSAG1Q6PB30 78 aa10.55□□□□□ -0.72
RETREG1-201ENST00000306320 DNAH11Q96DT5 4516 aa10.55□□□□□ -0.72
RETREG1-201ENST00000306320 C1orf134Q5TEV5 83 aa10.53□□□□□ -0.72
RETREG1-201ENST00000306320 WWC2-AS2Q96NR7 200 aa10.51□□□□□ -0.73
RETREG1-201ENST00000306320 KRTAP10-2P60368 255 aa10.5□□□□□ -0.73
RETREG1-201ENST00000306320 KRTAP13-1Q8IUC0 172 aa10.48□□□□□ -0.73
RETREG1-201ENST00000306320 UQCR11O14957 56 aa10.48□□□□□ -0.73
RETREG1-201ENST00000306320 ASB16-AS1Q495Z4 193 aa10.48□□□□□ -0.73
RETREG1-201ENST00000306320 HYDINQ4G0P3 5121 aa10.47□□□□□ -0.73
RETREG1-201ENST00000306320 ZNF706Q9Y5V0 76 aaPredicted RBP10.46□□□□□ -0.74
RETREG1-201ENST00000306320 DMBT1Q9UGM3 2413 aaPredicted RBP10.41□□□□□ -0.74
RETREG1-201ENST00000306320 ZNF861PO60384 105 aa10.41□□□□□ -0.74
RETREG1-201ENST00000306320 PLA2G1BP04054 148 aaKnown RBP10.39□□□□□ -0.75
RETREG1-201ENST00000306320 Q8N1X5 172 aa10.38□□□□□ -0.75
RETREG1-201ENST00000306320 CRIPTQ9P021 101 aa10.38□□□□□ -0.75
RETREG1-201ENST00000306320 LRP1BQ9NZR2 4599 aa10.37□□□□□ -0.75
RETREG1-201ENST00000306320 DMAC1Q96GE9 116 aa10.36□□□□□ -0.75
RETREG1-201ENST00000306320 DNAH5Q8TE73 4624 aa10.35□□□□□ -0.75
RETREG1-201ENST00000306320 SPATA8Q6RVD6 105 aa10.33□□□□□ -0.76
RETREG1-201ENST00000306320 IGLV7-43P04211 117 aa10.32□□□□□ -0.76
RETREG1-201ENST00000306320 FAM229AH3BQW9 127 aa10.32□□□□□ -0.76
RETREG1-201ENST00000306320 LINC00483Q53H64 154 aa10.31□□□□□ -0.76
RETREG1-201ENST00000306320 KRTAP10-1P60331 282 aa10.3□□□□□ -0.76
RETREG1-201ENST00000306320 ALMS1Q8TCU4 4167 aa10.26□□□□□ -0.77
RETREG1-201ENST00000306320 KRTAP13-3Q3SY46 172 aa10.26□□□□□ -0.77
RETREG1-201ENST00000306320 SMR3BP02814 79 aaPredicted RBP10.22□□□□□ -0.77
RETREG1-201ENST00000306320 PKHD1P08F94 4074 aa10.19□□□□□ -0.78
RETREG1-201ENST00000306320 FAT2Q9NYQ8 4349 aa10.19□□□□□ -0.78
RETREG1-201ENST00000306320 VPS13BQ7Z7G8 4022 aa10.16□□□□□ -0.78
RETREG1-201ENST00000306320 KRTAP13-2Q52LG2 175 aa10.13□□□□□ -0.79
RETREG1-201ENST00000306320 FAT1Q14517 4588 aa10.1□□□□□ -0.79
RETREG1-201ENST00000306320 PKD1P98161 4303 aa10.07□□□□□ -0.8
RETREG1-201ENST00000306320 SSBP3-AS1Q7Z2R9 100 aa10.06□□□□□ -0.8
RETREG1-201ENST00000306320 TYMSOSQ8TAI1 123 aa10.04□□□□□ -0.8
RETREG1-201ENST00000306320 C9orf92A6NGG3 77 aa10.01□□□□□ -0.81
RETREG1-201ENST00000306320 H0YAA0 97 aa9.98□□□□□ -0.81
RETREG1-201ENST00000306320 Q6ZSA8 131 aa9.98□□□□□ -0.81
RETREG1-201ENST00000306320 SACSQ9NZJ4 4579 aa9.97□□□□□ -0.81
RETREG1-201ENST00000306320 LINC00304Q8N9R0 145 aa9.95□□□□□ -0.82
RETREG1-201ENST00000306320 A0A1B0GU33 70 aa9.94□□□□□ -0.82
RETREG1-201ENST00000306320 KRTAP1-4P0C5Y4 121 aa9.94□□□□□ -0.82
RETREG1-201ENST00000306320 KRTAP25-1Q3LHN0 102 aa9.93□□□□□ -0.82
RETREG1-201ENST00000306320 DYNC1H1Q14204 4646 aaKnown RBP9.92□□□□□ -0.82
RETREG1-201ENST00000306320 KRTAP16-1A8MUX0 517 aa9.92□□□□□ -0.82
RETREG1-201ENST00000306320 ROMO1P60602 79 aa9.89□□□□□ -0.83
RETREG1-201ENST00000306320 A0A0D9SG42 100 aa9.87□□□□□ -0.83
RETREG1-201ENST00000306320 A8MUU9 505 aa9.87□□□□□ -0.83
RETREG1-201ENST00000306320 KMT2CQ8NEZ4 4911 aaKnown RBP9.86□□□□□ -0.83
RETREG1-201ENST00000306320 K7ERS5 55 aa9.85□□□□□ -0.83
RETREG1-201ENST00000306320 SPINT4Q6UDR6 99 aa9.83□□□□□ -0.84
RETREG1-201ENST00000306320 H1FX-AS1Q4G0G2 97 aa9.76□□□□□ -0.85
RETREG1-201ENST00000306320 LRP1Q07954 4544 aaKnown RBP9.72□□□□□ -0.85
RETREG1-201ENST00000306320 APOBP04114 4563 aaKnown RBP9.69□□□□□ -0.86
RETREG1-201ENST00000306320 MYCBP2O75592 4640 aa9.68□□□□□ -0.86
RETREG1-201ENST00000306320 C10orf95Q9H7T3 257 aa9.66□□□□□ -0.86
RETREG1-201ENST00000306320 P0C880 135 aa9.65□□□□□ -0.87
RETREG1-201ENST00000306320 COX6B2Q6YFQ2 88 aa9.64□□□□□ -0.87
RETREG1-201ENST00000306320 KRTAP3-1Q9BYR8 98 aa9.6□□□□□ -0.87
RETREG1-201ENST00000306320 RYR2Q92736 4967 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms