RNA–Protein interactions for RNA: ENST00000303545.3

RNF139-201, Transcript of ring finger protein 139, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF139, Length 2,637 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF139-201ENST00000303545 CDK2AP2O75956 126 aa11□□□□□ -0.65
RNF139-201ENST00000303545 C1orf64Q8NEQ6 169 aa11□□□□□ -0.65
RNF139-201ENST00000303545 A0A1B0GVX0 72 aa10.99□□□□□ -0.65
RNF139-201ENST00000303545 VPS13BQ7Z7G8 4022 aa10.95□□□□□ -0.66
RNF139-201ENST00000303545 C1orf195Q5TG92 126 aa10.94□□□□□ -0.66
RNF139-201ENST00000303545 ASB16-AS1Q495Z4 193 aa10.91□□□□□ -0.66
RNF139-201ENST00000303545 PCOTHQ58A44 107 aa10.91□□□□□ -0.66
RNF139-201ENST00000303545 PKHD1P08F94 4074 aa10.91□□□□□ -0.66
RNF139-201ENST00000303545 Q6ZSA8 131 aa10.89□□□□□ -0.67
RNF139-201ENST00000303545 Q1T7F1 81 aa10.89□□□□□ -0.67
RNF139-201ENST00000303545 KRTAP13-2Q52LG2 175 aa10.88□□□□□ -0.67
RNF139-201ENST00000303545 MRPL34Q9BQ48 92 aaKnown RBP10.88□□□□□ -0.67
RNF139-201ENST00000303545 CYP4F30PQ9H0H9 118 aa10.86□□□□□ -0.67
RNF139-201ENST00000303545 H3BPC8 53 aa10.86□□□□□ -0.67
RNF139-201ENST00000303545 SSBP3-AS1Q7Z2R9 100 aa10.84□□□□□ -0.67
RNF139-201ENST00000303545 SACSQ9NZJ4 4579 aa10.84□□□□□ -0.67
RNF139-201ENST00000303545 PSPHP1O15172 72 aa10.83□□□□□ -0.68
RNF139-201ENST00000303545 TP53AIP1Q9HCN2 124 aa10.83□□□□□ -0.68
RNF139-201ENST00000303545 V9GYY9 64 aa10.83□□□□□ -0.68
RNF139-201ENST00000303545 CD164Q04900 197 aa10.8□□□□□ -0.68
RNF139-201ENST00000303545 Q5W150 140 aa10.78□□□□□ -0.68
RNF139-201ENST00000303545 SPANXA2-OT1Q8N9U9 137 aa10.77□□□□□ -0.69
RNF139-201ENST00000303545 KRTAP1-4P0C5Y4 121 aa10.76□□□□□ -0.69
RNF139-201ENST00000303545 RETNLBQ9BQ08 111 aa10.76□□□□□ -0.69
RNF139-201ENST00000303545 PLA2G1BP04054 148 aaKnown RBP10.72□□□□□ -0.69
RNF139-201ENST00000303545 A8MUN3 132 aa10.71□□□□□ -0.69
RNF139-201ENST00000303545 SMR3BP02814 79 aaPredicted RBP10.71□□□□□ -0.69
RNF139-201ENST00000303545 SEC61GP60059 68 aa10.71□□□□□ -0.7
RNF139-201ENST00000303545 IGLV7-46A0A075B6I9 117 aa10.7□□□□□ -0.7
RNF139-201ENST00000303545 LINC00313P59037 77 aa10.69□□□□□ -0.7
RNF139-201ENST00000303545 DYNC1H1Q14204 4646 aaKnown RBP10.69□□□□□ -0.7
RNF139-201ENST00000303545 KRTAP21-3Q3LHN1 58 aa10.69□□□□□ -0.7
RNF139-201ENST00000303545 PMAIP1Q13794 54 aa10.67□□□□□ -0.7
RNF139-201ENST00000303545 COA5Q86WW8 74 aa10.67□□□□□ -0.7
RNF139-201ENST00000303545 TYMSOSQ8TAI1 123 aa10.65□□□□□ -0.71
RNF139-201ENST00000303545 A8MU10 97 aa10.64□□□□□ -0.71
RNF139-201ENST00000303545 Q5VV11 94 aa10.64□□□□□ -0.71
RNF139-201ENST00000303545 Q8N9P0 234 aaPredicted RBP10.64□□□□□ -0.71
RNF139-201ENST00000303545 C8orf87E5RJ46 101 aa10.63□□□□□ -0.71
RNF139-201ENST00000303545 KRTAP13-3Q3SY46 172 aa10.63□□□□□ -0.71
RNF139-201ENST00000303545 FAT1Q14517 4588 aa10.62□□□□□ -0.71
RNF139-201ENST00000303545 C4orf48Q5BLP8 95 aa10.61□□□□□ -0.71
RNF139-201ENST00000303545 PRR26Q8N8Z3 221 aa10.61□□□□□ -0.71
RNF139-201ENST00000303545 LOC101927531A0A1B0GV80 90 aa10.58□□□□□ -0.72
RNF139-201ENST00000303545 LIMD2Q9BT23 127 aa10.57□□□□□ -0.72
RNF139-201ENST00000303545 CHKB-CPT1BH3BT56 60 aa10.55□□□□□ -0.72
RNF139-201ENST00000303545 HRES1P13985 223 aa10.55□□□□□ -0.72
RNF139-201ENST00000303545 KRTAP16-1A8MUX0 517 aa10.54□□□□□ -0.72
RNF139-201ENST00000303545 PRR15LQ9BU68 103 aa10.53□□□□□ -0.72
RNF139-201ENST00000303545 APOBP04114 4563 aaKnown RBP10.53□□□□□ -0.72
RNF139-201ENST00000303545 KMT2CQ8NEZ4 4911 aaKnown RBP10.52□□□□□ -0.72
RNF139-201ENST00000303545 SPAG11AQ6PDA7 123 aa10.51□□□□□ -0.73
RNF139-201ENST00000303545 FAM229AH3BQW9 127 aa10.49□□□□□ -0.73
RNF139-201ENST00000303545 RYR2Q92736 4967 aa10.49□□□□□ -0.73
RNF139-201ENST00000303545 SPINK1P00995 79 aa10.48□□□□□ -0.73
RNF139-201ENST00000303545 LINC00304Q8N9R0 145 aa10.48□□□□□ -0.73
RNF139-201ENST00000303545 A0A1B0GVY2 172 aa10.47□□□□□ -0.73
RNF139-201ENST00000303545 IGKV2D-30A0A075B6S6 120 aa10.44□□□□□ -0.74
RNF139-201ENST00000303545 IGKV2-30P06310 120 aa10.44□□□□□ -0.74
RNF139-201ENST00000303545 LCA10Q71F78 164 aa10.43□□□□□ -0.74
RNF139-201ENST00000303545 Q75L30 129 aa10.42□□□□□ -0.74
RNF139-201ENST00000303545 SPTSSBQ8NFR3 76 aa10.41□□□□□ -0.74
RNF139-201ENST00000303545 A6NED7 52 aa10.39□□□□□ -0.75
RNF139-201ENST00000303545 KRTAP10-4P60372 401 aaPredicted RBP10.37□□□□□ -0.75
RNF139-201ENST00000303545 C9orf92A6NGG3 77 aa10.37□□□□□ -0.75
RNF139-201ENST00000303545 ATP11AUNQ6ZP68 121 aa10.35□□□□□ -0.75
RNF139-201ENST00000303545 ACYP2P14621 99 aa10.35□□□□□ -0.75
RNF139-201ENST00000303545 KTN1-AS1Q86SY8 53 aa10.34□□□□□ -0.75
RNF139-201ENST00000303545 PKHD1L1Q86WI1 4243 aa10.32□□□□□ -0.76
RNF139-201ENST00000303545 DMAC1Q96GE9 116 aa10.32□□□□□ -0.76
RNF139-201ENST00000303545 LINC01558Q9Y6Z2 57 aa10.3□□□□□ -0.76
RNF139-201ENST00000303545 CDC42SE1Q9NRR8 79 aa10.29□□□□□ -0.76
RNF139-201ENST00000303545 A6NN06 94 aa10.27□□□□□ -0.76
RNF139-201ENST00000303545 LRP1Q07954 4544 aaKnown RBP10.25□□□□□ -0.77
RNF139-201ENST00000303545 RPS29P62273 56 aaKnown RBP10.24□□□□□ -0.77
RNF139-201ENST00000303545 C7orf65Q6ZTY9 151 aa10.23□□□□□ -0.77
RNF139-201ENST00000303545 RBM12B-AS1Q9P1G2 102 aa10.22□□□□□ -0.77
RNF139-201ENST00000303545 SPINK7P58062 85 aa10.21□□□□□ -0.78
RNF139-201ENST00000303545 Q8N1X5 172 aa10.2□□□□□ -0.78
RNF139-201ENST00000303545 RYR3Q15413 4870 aa10.2□□□□□ -0.78
RNF139-201ENST00000303545 HSPG2P98160 4391 aa10.14□□□□□ -0.79
RNF139-201ENST00000303545 FLG2Q5D862 2391 aaPredicted RBP10.14□□□□□ -0.79
RNF139-201ENST00000303545 TNXBP22105 4242 aa10.11□□□□□ -0.79
RNF139-201ENST00000303545 FAT3Q8TDW7 4589 aa10.08□□□□□ -0.8
RNF139-201ENST00000303545 A8MUU9 505 aa10.08□□□□□ -0.8
RNF139-201ENST00000303545 C20orf166-AS1Q96NR2 134 aa10.08□□□□□ -0.8
RNF139-201ENST00000303545 Q5VSD8 79 aa10.07□□□□□ -0.8
RNF139-201ENST00000303545 A0A1B0GU69 56 aa10.05□□□□□ -0.8
RNF139-201ENST00000303545 KRTAP17-1Q9BYP8 105 aa10.03□□□□□ -0.8
RNF139-201ENST00000303545 DMBT1Q9UGM3 2413 aaPredicted RBP10.02□□□□□ -0.81
RNF139-201ENST00000303545 RYR1P21817 5038 aa9.99□□□□□ -0.81
RNF139-201ENST00000303545 MYCBP2O75592 4640 aa9.98□□□□□ -0.81
RNF139-201ENST00000303545 KIAA1109Q2LD37 5005 aa9.97□□□□□ -0.81
RNF139-201ENST00000303545 KRTAP10-8P60410 259 aa9.94□□□□□ -0.82
RNF139-201ENST00000303545 KRTAP3-1Q9BYR8 98 aa9.94□□□□□ -0.82
RNF139-201ENST00000303545 PRAC1Q96KF2 57 aa9.87□□□□□ -0.83
RNF139-201ENST00000303545 EPPK1P58107 5090 aaKnown RBP9.84□□□□□ -0.83
RNF139-201ENST00000303545 ADM2Q7Z4H4 148 aa9.83□□□□□ -0.84
RNF139-201ENST00000303545 UQCR11O14957 56 aa9.8□□□□□ -0.84
RNF139-201ENST00000303545 MIR22HGQ0VDD5 57 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms