RNA–Protein interactions for RNA: ENST00000303407.11

BRD3-201, Transcript of bromodomain containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene BRD3, Length 5,652 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD3-201ENST00000303407 ROMO1P60602 79 aa9.23□□□□□ -0.93
BRD3-201ENST00000303407 HRNRQ86YZ3 2850 aaPredicted RBP9.23□□□□□ -0.93
BRD3-201ENST00000303407 ADM2Q7Z4H4 148 aa9.22□□□□□ -0.93
BRD3-201ENST00000303407 TACC2O95359 2948 aa9.21□□□□□ -0.93
BRD3-201ENST00000303407 LOC400499M0QZD8 3231 aa9.2□□□□□ -0.94
BRD3-201ENST00000303407 STAB1Q9NY15 2570 aa9.2□□□□□ -0.94
BRD3-201ENST00000303407 KMT2BQ9UMN6 2715 aaPredicted RBP9.19□□□□□ -0.94
BRD3-201ENST00000303407 M0QZ58 72 aa9.19□□□□□ -0.94
BRD3-201ENST00000303407 APCP25054 2843 aa9.14□□□□□ -0.95
BRD3-201ENST00000303407 BAHCC1Q9P281 2608 aa9.14□□□□□ -0.95
BRD3-201ENST00000303407 NSD1Q96L73 2696 aaPredicted RBP9.09□□□□□ -0.95
BRD3-201ENST00000303407 A6NN06 94 aa9.07□□□□□ -0.96
BRD3-201ENST00000303407 HIVEP1P15822 2718 aa9.06□□□□□ -0.96
BRD3-201ENST00000303407 KRTAP16-1A8MUX0 517 aa9.06□□□□□ -0.96
BRD3-201ENST00000303407 A8MU10 97 aa9.03□□□□□ -0.96
BRD3-201ENST00000303407 WDFY3Q8IZQ1 3526 aa9.02□□□□□ -0.97
BRD3-201ENST00000303407 FLG2Q5D862 2391 aaPredicted RBP9□□□□□ -0.97
BRD3-201ENST00000303407 ASH1LQ9NR48 2969 aaKnown RBP9□□□□□ -0.97
BRD3-201ENST00000303407 KRTAP21-3Q3LHN1 58 aa8.99□□□□□ -0.97
BRD3-201ENST00000303407 ASPMQ8IZT6 3477 aa8.96□□□□□ -0.97
BRD3-201ENST00000303407 ZANQ9Y493 2812 aa8.96□□□□□ -0.97
BRD3-201ENST00000303407 A8MUU9 505 aa8.95□□□□□ -0.98
BRD3-201ENST00000303407 KRTAP1-4P0C5Y4 121 aa8.94□□□□□ -0.98
BRD3-201ENST00000303407 C20orf166-AS1Q96NR2 134 aa8.94□□□□□ -0.98
BRD3-201ENST00000303407 ZFHX4Q86UP3 3567 aa8.92□□□□□ -0.98
BRD3-201ENST00000303407 RELNP78509 3460 aa8.89□□□□□ -0.99
BRD3-201ENST00000303407 PLAC4Q8WY50 150 aa8.88□□□□□ -0.99
BRD3-201ENST00000303407 KRTAP25-1Q3LHN0 102 aa8.88□□□□□ -0.99
BRD3-201ENST00000303407 STAB2Q8WWQ8 2551 aa8.86□□□□□ -0.99
BRD3-201ENST00000303407 DMDP11532 3685 aa8.85□□□□□ -0.99
BRD3-201ENST00000303407 CRYBG3Q68DQ2 2970 aa8.85□□□□□ -0.99
BRD3-201ENST00000303407 CELSR2Q9HCU4 2923 aa8.85□□□□□ -0.99
BRD3-201ENST00000303407 NIPBLQ6KC79 2804 aaeCLIP8.84□□□□□ -0.99
BRD3-201ENST00000303407 DMBT1Q9UGM3 2413 aaPredicted RBP8.79□□□□□ -1
BRD3-201ENST00000303407 LAMA5O15230 3695 aa8.79□□□□□ -1
BRD3-201ENST00000303407 DCHS2Q6V1P9 2916 aa8.79□□□□□ -1
BRD3-201ENST00000303407 FBN2P35556 2912 aa8.79□□□□□ -1
BRD3-201ENST00000303407 DCHS1Q96JQ0 3298 aa8.76□□□□□ -1.01
BRD3-201ENST00000303407 XP32Q5T750 250 aa8.73□□□□□ -1.01
BRD3-201ENST00000303407 CSMD1Q96PZ7 3565 aa8.68□□□□□ -1.02
BRD3-201ENST00000303407 SMG1Q96Q15 3661 aaKnown RBP8.68□□□□□ -1.02
BRD3-201ENST00000303407 NDUFAF8A1L188 74 aa8.67□□□□□ -1.02
BRD3-201ENST00000303407 TENM4Q6N022 2769 aa8.67□□□□□ -1.02
BRD3-201ENST00000303407 NF1P21359 2839 aa8.61□□□□□ -1.03
BRD3-201ENST00000303407 MXRA5Q9NR99 2828 aa8.6□□□□□ -1.03
BRD3-201ENST00000303407 H0YAA0 97 aa8.57□□□□□ -1.04
BRD3-201ENST00000303407 CELSR1Q9NYQ6 3014 aa8.55□□□□□ -1.04
BRD3-201ENST00000303407 NBPF19A0A087WUL8 3843 aa8.54□□□□□ -1.04
BRD3-201ENST00000303407 ANK3Q12955 4377 aaKnown RBP8.54□□□□□ -1.04
BRD3-201ENST00000303407 PDZD2O15018 2839 aa8.52□□□□□ -1.05
BRD3-201ENST00000303407 TPRXLQ17RH7 258 aa8.5□□□□□ -1.05
BRD3-201ENST00000303407 KRTAP13-3Q3SY46 172 aa8.5□□□□□ -1.05
BRD3-201ENST00000303407 A0A1B0GVY2 172 aa8.47□□□□□ -1.05
BRD3-201ENST00000303407 TNP1P09430 55 aa8.46□□□□□ -1.05
BRD3-201ENST00000303407 MUC3AQ02505 3323 aa8.45□□□□□ -1.06
BRD3-201ENST00000303407 BSNQ9UPA5 3926 aa8.41□□□□□ -1.06
BRD3-201ENST00000303407 C10orf95Q9H7T3 257 aa8.41□□□□□ -1.06
BRD3-201ENST00000303407 SVEP1Q4LDE5 3571 aa8.4□□□□□ -1.07
BRD3-201ENST00000303407 TENM3Q9P273 2699 aa8.39□□□□□ -1.07
BRD3-201ENST00000303407 SPENQ96T58 3664 aaKnown RBP8.36□□□□□ -1.07
BRD3-201ENST00000303407 KRTAP10-8P60410 259 aa8.34□□□□□ -1.07
BRD3-201ENST00000303407 P0C880 135 aa8.33□□□□□ -1.08
BRD3-201ENST00000303407 TENM2Q9NT68 2774 aa8.28□□□□□ -1.08
BRD3-201ENST00000303407 PP632Q6XCG6 107 aa8.25□□□□□ -1.09
BRD3-201ENST00000303407 OTOGQ6ZRI0 2925 aa8.22□□□□□ -1.09
BRD3-201ENST00000303407 TENM1Q9UKZ4 2725 aa8.22□□□□□ -1.09
BRD3-201ENST00000303407 TGP01266 2768 aa8.16□□□□□ -1.1
BRD3-201ENST00000303407 KRTAP10-10P60014 251 aa8.11□□□□□ -1.11
BRD3-201ENST00000303407 CSMD2Q7Z408 3487 aa8.11□□□□□ -1.11
BRD3-201ENST00000303407 KRTAP3-1Q9BYR8 98 aa8.09□□□□□ -1.12
BRD3-201ENST00000303407 KRTAP12-2P59991 146 aa8.07□□□□□ -1.12
BRD3-201ENST00000303407 FBN1P35555 2871 aaKnown RBP8.06□□□□□ -1.12
BRD3-201ENST00000303407 VWFP04275 2813 aa8.04□□□□□ -1.12
BRD3-201ENST00000303407 HUWE1Q7Z6Z7 4374 aaKnown RBP8.04□□□□□ -1.12
BRD3-201ENST00000303407 TRRAPQ9Y4A5 3859 aa8.01□□□□□ -1.13
BRD3-201ENST00000303407 ZFHX3Q15911 3703 aa8□□□□□ -1.13
BRD3-201ENST00000303407 VPS13CQ709C8 3753 aa7.94□□□□□ -1.14
BRD3-201ENST00000303407 KRTAP12-1P59990 96 aa7.91□□□□□ -1.14
BRD3-201ENST00000303407 CUBNO60494 3623 aa7.91□□□□□ -1.14
BRD3-201ENST00000303407 PRO2289Q9P1D8 64 aa7.89□□□□□ -1.15
BRD3-201ENST00000303407 PKD1L1Q8TDX9 2849 aa7.87□□□□□ -1.15
BRD3-201ENST00000303407 AKAP9Q99996 3911 aa7.83□□□□□ -1.16
BRD3-201ENST00000303407 KRTAP13-4Q3LI77 160 aa7.81□□□□□ -1.16
BRD3-201ENST00000303407 KRTAP10-6P60371 365 aaPredicted RBP7.79□□□□□ -1.16
BRD3-201ENST00000303407 ALMS1Q8TCU4 4167 aa7.76□□□□□ -1.17
BRD3-201ENST00000303407 MT1HL1P0DM35 61 aa7.71□□□□□ -1.17
BRD3-201ENST00000303407 KRTAP10-4P60372 401 aaPredicted RBP7.68□□□□□ -1.18
BRD3-201ENST00000303407 FBN3Q75N90 2809 aa7.67□□□□□ -1.18
BRD3-201ENST00000303407 ZNF469Q96JG9 3925 aaPredicted RBP7.63□□□□□ -1.19
BRD3-201ENST00000303407 MEGF8Q7Z7M0 2845 aa7.61□□□□□ -1.19
BRD3-201ENST00000303407 KRTAP3-3Q9BYR6 98 aa7.61□□□□□ -1.19
BRD3-201ENST00000303407 DNAH9Q9NYC9 4486 aa7.6□□□□□ -1.19
BRD3-201ENST00000303407 KRTAP3-2Q9BYR7 98 aa7.57□□□□□ -1.2
BRD3-201ENST00000303407 SRRM2Q9UQ35 2752 aaKnown RBP7.49□□□□□ -1.21
BRD3-201ENST00000303407 KRTAP4-5Q9BYR2 181 aa7.47□□□□□ -1.21
BRD3-201ENST00000303407 DNAH1Q9P2D7 4330 aa7.44□□□□□ -1.22
BRD3-201ENST00000303407 CSMD3Q7Z407 3707 aa7.38□□□□□ -1.23
BRD3-201ENST00000303407 PLECQ15149 4684 aaKnown RBP7.35□□□□□ -1.23
BRD3-201ENST00000303407 KRTAP15-1Q3LI76 137 aa7.34□□□□□ -1.23
BRD3-201ENST00000303407 DNAH10Q8IVF4 4471 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms