RNA–Protein interactions for RNA: ENST00000298746.4

TRUB1-201, Transcript of TruB pseudouridine synthase family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRUB1, Length 3,408 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB1-201ENST00000298746 APLNQ9ULZ1 77 aa6.79□□□□□ -1.32
TRUB1-201ENST00000298746 IGKV2D-30A0A075B6S6 120 aa6.79□□□□□ -1.32
TRUB1-201ENST00000298746 IGKV2-30P06310 120 aa6.79□□□□□ -1.32
TRUB1-201ENST00000298746 SPINK1P00995 79 aa6.78□□□□□ -1.32
TRUB1-201ENST00000298746 KRTAP13-1Q8IUC0 172 aa6.78□□□□□ -1.32
TRUB1-201ENST00000298746 ZNF861PO60384 105 aa6.77□□□□□ -1.33
TRUB1-201ENST00000298746 PLAC8Q9NZF1 115 aa6.77□□□□□ -1.33
TRUB1-201ENST00000298746 C8orf87E5RJ46 101 aa6.76□□□□□ -1.33
TRUB1-201ENST00000298746 ASB16-AS1Q495Z4 193 aa6.76□□□□□ -1.33
TRUB1-201ENST00000298746 SPACA4Q8TDM5 124 aa6.76□□□□□ -1.33
TRUB1-201ENST00000298746 ANK2Q01484 3957 aa6.75□□□□□ -1.33
TRUB1-201ENST00000298746 RTL8CO15255 209 aa6.75□□□□□ -1.33
TRUB1-201ENST00000298746 MIR22HGQ0VDD5 57 aa6.75□□□□□ -1.33
TRUB1-201ENST00000298746 DNAH10Q8IVF4 4471 aa6.74□□□□□ -1.33
TRUB1-201ENST00000298746 IGLV5-52A0A0A0MRZ9 124 aa6.74□□□□□ -1.33
TRUB1-201ENST00000298746 UQCR11O14957 56 aa6.74□□□□□ -1.33
TRUB1-201ENST00000298746 FAM229AH3BQW9 127 aa6.72□□□□□ -1.33
TRUB1-201ENST00000298746 LINC00483Q53H64 154 aa6.72□□□□□ -1.33
TRUB1-201ENST00000298746 A0A087WTM6 91 aa6.71□□□□□ -1.34
TRUB1-201ENST00000298746 TGP01266 2768 aa6.69□□□□□ -1.34
TRUB1-201ENST00000298746 LINC01554Q52M75 96 aa6.69□□□□□ -1.34
TRUB1-201ENST00000298746 DMAC1Q96GE9 116 aa6.68□□□□□ -1.34
TRUB1-201ENST00000298746 NUPR2A6NF83 97 aa6.67□□□□□ -1.34
TRUB1-201ENST00000298746 IGLV7-43P04211 117 aa6.65□□□□□ -1.34
TRUB1-201ENST00000298746 FLG2Q5D862 2391 aaPredicted RBP6.64□□□□□ -1.35
TRUB1-201ENST00000298746 Q6ZRN7 208 aaPredicted RBP6.64□□□□□ -1.35
TRUB1-201ENST00000298746 C4orf48Q5BLP8 95 aa6.63□□□□□ -1.35
TRUB1-201ENST00000298746 CSAG1Q6PB30 78 aa6.63□□□□□ -1.35
TRUB1-201ENST00000298746 PLA2G1BP04054 148 aaKnown RBP6.62□□□□□ -1.35
TRUB1-201ENST00000298746 SSBP3-AS1Q7Z2R9 100 aa6.62□□□□□ -1.35
TRUB1-201ENST00000298746 SPATA8Q6RVD6 105 aa6.62□□□□□ -1.35
TRUB1-201ENST00000298746 FBN3Q75N90 2809 aa6.61□□□□□ -1.35
TRUB1-201ENST00000298746 Q8N1X5 172 aa6.6□□□□□ -1.35
TRUB1-201ENST00000298746 LYSTQ99698 3801 aa6.6□□□□□ -1.35
TRUB1-201ENST00000298746 KRTAP13-3Q3SY46 172 aa6.58□□□□□ -1.36
TRUB1-201ENST00000298746 HUWE1Q7Z6Z7 4374 aaKnown RBP6.58□□□□□ -1.36
TRUB1-201ENST00000298746 C1orf134Q5TEV5 83 aa6.57□□□□□ -1.36
TRUB1-201ENST00000298746 LY6G6CO95867 125 aa6.57□□□□□ -1.36
TRUB1-201ENST00000298746 DMBT1Q9UGM3 2413 aaPredicted RBP6.55□□□□□ -1.36
TRUB1-201ENST00000298746 H3BS24 57 aa6.55□□□□□ -1.36
TRUB1-201ENST00000298746 DNAH9Q9NYC9 4486 aa6.54□□□□□ -1.36
TRUB1-201ENST00000298746 MEGF8Q7Z7M0 2845 aa6.51□□□□□ -1.37
TRUB1-201ENST00000298746 DNAH1Q9P2D7 4330 aa6.5□□□□□ -1.37
TRUB1-201ENST00000298746 TYMSOSQ8TAI1 123 aa6.46□□□□□ -1.38
TRUB1-201ENST00000298746 KRTAP13-2Q52LG2 175 aa6.45□□□□□ -1.38
TRUB1-201ENST00000298746 CRIPTQ9P021 101 aa6.44□□□□□ -1.38
TRUB1-201ENST00000298746 K7ERS5 55 aa6.42□□□□□ -1.38
TRUB1-201ENST00000298746 KRTAP10-2P60368 255 aa6.41□□□□□ -1.38
TRUB1-201ENST00000298746 FRAS1Q86XX4 4008 aa6.4□□□□□ -1.38
TRUB1-201ENST00000298746 C9orf92A6NGG3 77 aa6.4□□□□□ -1.39
TRUB1-201ENST00000298746 PLECQ15149 4684 aaKnown RBP6.39□□□□□ -1.39
TRUB1-201ENST00000298746 CMYA5Q8N3K9 4069 aa6.39□□□□□ -1.39
TRUB1-201ENST00000298746 A0A1B0GU33 70 aa6.39□□□□□ -1.39
TRUB1-201ENST00000298746 KRTAP16-1A8MUX0 517 aa6.38□□□□□ -1.39
TRUB1-201ENST00000298746 DNAH7Q8WXX0 4024 aa6.38□□□□□ -1.39
TRUB1-201ENST00000298746 DNAH8Q96JB1 4490 aa6.36□□□□□ -1.39
TRUB1-201ENST00000298746 Q6ZSA8 131 aa6.34□□□□□ -1.39
TRUB1-201ENST00000298746 H0YAA0 97 aa6.32□□□□□ -1.4
TRUB1-201ENST00000298746 KRTAP10-1P60331 282 aa6.32□□□□□ -1.4
TRUB1-201ENST00000298746 LINC00304Q8N9R0 145 aa6.31□□□□□ -1.4
TRUB1-201ENST00000298746 DNAH3Q8TD57 4116 aa6.31□□□□□ -1.4
TRUB1-201ENST00000298746 KRTAP25-1Q3LHN0 102 aa6.3□□□□□ -1.4
TRUB1-201ENST00000298746 ALMS1Q8TCU4 4167 aa6.29□□□□□ -1.4
TRUB1-201ENST00000298746 A8MUU9 505 aa6.28□□□□□ -1.4
TRUB1-201ENST00000298746 H1FX-AS1Q4G0G2 97 aa6.27□□□□□ -1.41
TRUB1-201ENST00000298746 KRTAP1-4P0C5Y4 121 aa6.26□□□□□ -1.41
TRUB1-201ENST00000298746 SMR3BP02814 79 aaPredicted RBP6.25□□□□□ -1.41
TRUB1-201ENST00000298746 A0A0D9SG42 100 aa6.25□□□□□ -1.41
TRUB1-201ENST00000298746 ROMO1P60602 79 aa6.24□□□□□ -1.41
TRUB1-201ENST00000298746 DNAH17Q9UFH2 4485 aa6.23□□□□□ -1.41
TRUB1-201ENST00000298746 KMT2AQ03164 3969 aa6.22□□□□□ -1.41
TRUB1-201ENST00000298746 STARD9Q9P2P6 4700 aa6.22□□□□□ -1.41
TRUB1-201ENST00000298746 SPINT4Q6UDR6 99 aa6.22□□□□□ -1.41
TRUB1-201ENST00000298746 HECTD4Q9Y4D8 3996 aa6.18□□□□□ -1.42
TRUB1-201ENST00000298746 DNAH11Q96DT5 4516 aa6.17□□□□□ -1.42
TRUB1-201ENST00000298746 COX6B2Q6YFQ2 88 aa6.16□□□□□ -1.42
TRUB1-201ENST00000298746 VPS13DQ5THJ4 4388 aa6.15□□□□□ -1.42
TRUB1-201ENST00000298746 DNAH2Q9P225 4427 aa6.12□□□□□ -1.43
TRUB1-201ENST00000298746 KRTAP3-1Q9BYR8 98 aa6.12□□□□□ -1.43
TRUB1-201ENST00000298746 DNAH6Q9C0G6 4158 aa6.11□□□□□ -1.43
TRUB1-201ENST00000298746 RPL37P61927 97 aaKnown RBP6.1□□□□□ -1.43
TRUB1-201ENST00000298746 LRP1BQ9NZR2 4599 aa6.09□□□□□ -1.43
TRUB1-201ENST00000298746 C20orf166-AS1Q96NR2 134 aa6.06□□□□□ -1.44
TRUB1-201ENST00000298746 PRKDCP78527 4128 aaKnown RBP6.06□□□□□ -1.44
TRUB1-201ENST00000298746 DYNC2H1Q8NCM8 4307 aaKnown RBP6.04□□□□□ -1.44
TRUB1-201ENST00000298746 C10orf95Q9H7T3 257 aa6.02□□□□□ -1.45
TRUB1-201ENST00000298746 RPS29P62273 56 aaKnown RBP6.01□□□□□ -1.45
TRUB1-201ENST00000298746 P0C880 135 aa5.99□□□□□ -1.45
TRUB1-201ENST00000298746 VPS13BQ7Z7G8 4022 aa5.98□□□□□ -1.45
TRUB1-201ENST00000298746 DNAH5Q8TE73 4624 aa5.97□□□□□ -1.45
TRUB1-201ENST00000298746 NDUFAF8A1L188 74 aa5.95□□□□□ -1.46
TRUB1-201ENST00000298746 S4R3F8 94 aa5.94□□□□□ -1.46
TRUB1-201ENST00000298746 TPRXLQ17RH7 258 aa5.93□□□□□ -1.46
TRUB1-201ENST00000298746 KRTAP13-4Q3LI77 160 aa5.92□□□□□ -1.46
TRUB1-201ENST00000298746 KRTAP10-6P60371 365 aaPredicted RBP5.88□□□□□ -1.47
TRUB1-201ENST00000298746 FAT1Q14517 4588 aa5.83□□□□□ -1.48
TRUB1-201ENST00000298746 KRTAP12-2P59991 146 aa5.8□□□□□ -1.48
TRUB1-201ENST00000298746 KRTAP3-3Q9BYR6 98 aa5.8□□□□□ -1.48
TRUB1-201ENST00000298746 HYDINQ4G0P3 5121 aa5.79□□□□□ -1.48
TRUB1-201ENST00000298746 KRTAP10-8P60410 259 aa5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 87.4 ms