RNA–Protein interactions for RNA: ENST00000298307.9

KLHDC2-201, Transcript of kelch domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KLHDC2, Length 5,514 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC2-201ENST00000298307 SPEGQ15772 3267 aa11.16□□□□□ -0.62
KLHDC2-201ENST00000298307 FLNCQ14315 2725 aa11.15□□□□□ -0.63
KLHDC2-201ENST00000298307 COL12A1Q99715 3063 aa11.14□□□□□ -0.63
KLHDC2-201ENST00000298307 KRTAP13-2Q52LG2 175 aa11.14□□□□□ -0.63
KLHDC2-201ENST00000298307 NSD1Q96L73 2696 aaPredicted RBP11.14□□□□□ -0.63
KLHDC2-201ENST00000298307 UTP20O75691 2785 aaKnown RBP11.12□□□□□ -0.63
KLHDC2-201ENST00000298307 A8MUU9 505 aa11.1□□□□□ -0.63
KLHDC2-201ENST00000298307 CFAP47Q6ZTR5 3102 aa11.09□□□□□ -0.63
KLHDC2-201ENST00000298307 RPS29P62273 56 aaKnown RBP11.06□□□□□ -0.64
KLHDC2-201ENST00000298307 HIVEP1P15822 2718 aa11.04□□□□□ -0.64
KLHDC2-201ENST00000298307 ITPR2Q14571 2701 aa11.04□□□□□ -0.64
KLHDC2-201ENST00000298307 Q5VSD8 79 aa10.96□□□□□ -0.66
KLHDC2-201ENST00000298307 SEC61BP60468 96 aaKnown RBP10.95□□□□□ -0.66
KLHDC2-201ENST00000298307 CELSR2Q9HCU4 2923 aa10.93□□□□□ -0.66
KLHDC2-201ENST00000298307 NIPBLQ6KC79 2804 aaeCLIP10.9□□□□□ -0.66
KLHDC2-201ENST00000298307 ZANQ9Y493 2812 aa10.9□□□□□ -0.66
KLHDC2-201ENST00000298307 HRNRQ86YZ3 2850 aaPredicted RBP10.88□□□□□ -0.67
KLHDC2-201ENST00000298307 TNRC18O15417 2968 aaPredicted RBP10.86□□□□□ -0.67
KLHDC2-201ENST00000298307 SPTBN5Q9NRC6 3674 aaKnown RBP10.86□□□□□ -0.67
KLHDC2-201ENST00000298307 H0YAA0 97 aa10.85□□□□□ -0.67
KLHDC2-201ENST00000298307 USP34Q70CQ2 3546 aa10.84□□□□□ -0.67
KLHDC2-201ENST00000298307 PLAC4Q8WY50 150 aa10.84□□□□□ -0.67
KLHDC2-201ENST00000298307 DMXL1Q9Y485 3027 aa10.78□□□□□ -0.68
KLHDC2-201ENST00000298307 C20orf166-AS1Q96NR2 134 aa10.77□□□□□ -0.68
KLHDC2-201ENST00000298307 KMT2BQ9UMN6 2715 aaPredicted RBP10.76□□□□□ -0.69
KLHDC2-201ENST00000298307 LOC400499M0QZD8 3231 aa10.76□□□□□ -0.69
KLHDC2-201ENST00000298307 DCHS2Q6V1P9 2916 aa10.75□□□□□ -0.69
KLHDC2-201ENST00000298307 C10orf95Q9H7T3 257 aa10.74□□□□□ -0.69
KLHDC2-201ENST00000298307 FBN2P35556 2912 aa10.72□□□□□ -0.69
KLHDC2-201ENST00000298307 EYSQ5T1H1 3165 aa10.71□□□□□ -0.7
KLHDC2-201ENST00000298307 MYO15AQ9UKN7 3530 aa10.67□□□□□ -0.7
KLHDC2-201ENST00000298307 KRTAP1-4P0C5Y4 121 aa10.6□□□□□ -0.71
KLHDC2-201ENST00000298307 NF1P21359 2839 aa10.6□□□□□ -0.71
KLHDC2-201ENST00000298307 KRTAP13-3Q3SY46 172 aa10.56□□□□□ -0.72
KLHDC2-201ENST00000298307 P0C880 135 aa10.49□□□□□ -0.73
KLHDC2-201ENST00000298307 TNP1P09430 55 aa10.43□□□□□ -0.74
KLHDC2-201ENST00000298307 WDFY3Q8IZQ1 3526 aa10.42□□□□□ -0.74
KLHDC2-201ENST00000298307 CRYBG3Q68DQ2 2970 aa10.42□□□□□ -0.74
KLHDC2-201ENST00000298307 MXRA5Q9NR99 2828 aa10.4□□□□□ -0.75
KLHDC2-201ENST00000298307 DCHS1Q96JQ0 3298 aa10.39□□□□□ -0.75
KLHDC2-201ENST00000298307 PP632Q6XCG6 107 aa10.38□□□□□ -0.75
KLHDC2-201ENST00000298307 TGP01266 2768 aa10.37□□□□□ -0.75
KLHDC2-201ENST00000298307 XP32Q5T750 250 aa10.31□□□□□ -0.76
KLHDC2-201ENST00000298307 TENM4Q6N022 2769 aa10.28□□□□□ -0.76
KLHDC2-201ENST00000298307 CELSR1Q9NYQ6 3014 aa10.27□□□□□ -0.76
KLHDC2-201ENST00000298307 TENM3Q9P273 2699 aa10.27□□□□□ -0.77
KLHDC2-201ENST00000298307 ZFHX4Q86UP3 3567 aa10.25□□□□□ -0.77
KLHDC2-201ENST00000298307 KRTAP10-8P60410 259 aa10.24□□□□□ -0.77
KLHDC2-201ENST00000298307 RELNP78509 3460 aa10.22□□□□□ -0.77
KLHDC2-201ENST00000298307 CSMD1Q96PZ7 3565 aa10.21□□□□□ -0.78
KLHDC2-201ENST00000298307 TPRXLQ17RH7 258 aa10.05□□□□□ -0.8
KLHDC2-201ENST00000298307 KRTAP12-2P59991 146 aa10.05□□□□□ -0.8
KLHDC2-201ENST00000298307 ASPMQ8IZT6 3477 aa10.03□□□□□ -0.8
KLHDC2-201ENST00000298307 PDZD2O15018 2839 aa10.02□□□□□ -0.81
KLHDC2-201ENST00000298307 TENM1Q9UKZ4 2725 aa10.01□□□□□ -0.81
KLHDC2-201ENST00000298307 SMG1Q96Q15 3661 aaKnown RBP10□□□□□ -0.81
KLHDC2-201ENST00000298307 KRTAP3-1Q9BYR8 98 aa9.94□□□□□ -0.82
KLHDC2-201ENST00000298307 LAMA5O15230 3695 aa9.91□□□□□ -0.82
KLHDC2-201ENST00000298307 KRTAP21-3Q3LHN1 58 aa9.89□□□□□ -0.83
KLHDC2-201ENST00000298307 KRTAP12-1P59990 96 aa9.88□□□□□ -0.83
KLHDC2-201ENST00000298307 A0A1B0GVY2 172 aa9.85□□□□□ -0.83
KLHDC2-201ENST00000298307 TENM2Q9NT68 2774 aa9.79□□□□□ -0.84
KLHDC2-201ENST00000298307 SVEP1Q4LDE5 3571 aa9.75□□□□□ -0.85
KLHDC2-201ENST00000298307 KRTAP13-4Q3LI77 160 aa9.75□□□□□ -0.85
KLHDC2-201ENST00000298307 PKD1L1Q8TDX9 2849 aa9.75□□□□□ -0.85
KLHDC2-201ENST00000298307 VWFP04275 2813 aa9.74□□□□□ -0.85
KLHDC2-201ENST00000298307 KRTAP10-6P60371 365 aaPredicted RBP9.7□□□□□ -0.86
KLHDC2-201ENST00000298307 DMDP11532 3685 aa9.67□□□□□ -0.86
KLHDC2-201ENST00000298307 FBN1P35555 2871 aaKnown RBP9.59□□□□□ -0.87
KLHDC2-201ENST00000298307 CUBNO60494 3623 aa9.59□□□□□ -0.88
KLHDC2-201ENST00000298307 KRTAP15-1Q3LI76 137 aa9.58□□□□□ -0.88
KLHDC2-201ENST00000298307 FBN3Q75N90 2809 aa9.51□□□□□ -0.89
KLHDC2-201ENST00000298307 SRRM2Q9UQ35 2752 aaKnown RBP9.5□□□□□ -0.89
KLHDC2-201ENST00000298307 KRTAP10-10P60014 251 aa9.49□□□□□ -0.89
KLHDC2-201ENST00000298307 NBPF19A0A087WUL8 3843 aa9.41□□□□□ -0.9
KLHDC2-201ENST00000298307 SPENQ96T58 3664 aaKnown RBP9.41□□□□□ -0.9
KLHDC2-201ENST00000298307 MEGF8Q7Z7M0 2845 aa9.4□□□□□ -0.91
KLHDC2-201ENST00000298307 KRTAP3-2Q9BYR7 98 aa9.38□□□□□ -0.91
KLHDC2-201ENST00000298307 MUC3AQ02505 3323 aa9.38□□□□□ -0.91
KLHDC2-201ENST00000298307 ANK3Q12955 4377 aaKnown RBP9.37□□□□□ -0.91
KLHDC2-201ENST00000298307 PRO2289Q9P1D8 64 aa9.32□□□□□ -0.92
KLHDC2-201ENST00000298307 KRTAP3-3Q9BYR6 98 aa9.31□□□□□ -0.92
KLHDC2-201ENST00000298307 OTOGQ6ZRI0 2925 aa9.31□□□□□ -0.92
KLHDC2-201ENST00000298307 CSMD2Q7Z408 3487 aa9.2□□□□□ -0.94
KLHDC2-201ENST00000298307 TRRAPQ9Y4A5 3859 aa9.18□□□□□ -0.94
KLHDC2-201ENST00000298307 ZFHX3Q15911 3703 aa9.16□□□□□ -0.94
KLHDC2-201ENST00000298307 BSNQ9UPA5 3926 aa9.09□□□□□ -0.95
KLHDC2-201ENST00000298307 COL7A1Q02388 2944 aa9.08□□□□□ -0.96
KLHDC2-201ENST00000298307 INE1O15225 51 aa9□□□□□ -0.97
KLHDC2-201ENST00000298307 VPS13CQ709C8 3753 aa8.97□□□□□ -0.97
KLHDC2-201ENST00000298307 HUWE1Q7Z6Z7 4374 aaKnown RBP8.9□□□□□ -0.98
KLHDC2-201ENST00000298307 MT1HL1P0DM35 61 aa8.83□□□□□ -1
KLHDC2-201ENST00000298307 KRTAP10-4P60372 401 aaPredicted RBP8.81□□□□□ -1
KLHDC2-201ENST00000298307 KRTAP23-1A1A580 65 aa8.68□□□□□ -1.02
KLHDC2-201ENST00000298307 CSMD3Q7Z407 3707 aa8.68□□□□□ -1.02
KLHDC2-201ENST00000298307 LORP23490 312 aaPredicted RBP8.63□□□□□ -1.03
KLHDC2-201ENST00000298307 KRTAP10-12P60413 245 aa8.58□□□□□ -1.04
KLHDC2-201ENST00000298307 AKAP9Q99996 3911 aa8.52□□□□□ -1.05
KLHDC2-201ENST00000298307 LCE3AQ5TA76 89 aa8.51□□□□□ -1.05
KLHDC2-201ENST00000298307 KRTAP12-3P60328 96 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms