RNA–Protein interactions for RNA: ENST00000295927.3

PTX3-201, Transcript of pentraxin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTX3, Length 1,940 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTX3-201ENST00000295927 CCDC179H3BU77 68 aa13.04□□□□□ -0.32
PTX3-201ENST00000295927 KRTAP29-1A8MX34 341 aaPredicted RBP13.03□□□□□ -0.32
PTX3-201ENST00000295927 RPS29P62273 56 aaKnown RBP13.03□□□□□ -0.32
PTX3-201ENST00000295927 TRAV7A0A075B6U4 112 aa13.03□□□□□ -0.32
PTX3-201ENST00000295927 CASC2Q6XLA1 102 aa13.03□□□□□ -0.32
PTX3-201ENST00000295927 UQCRQO14949 82 aa13.01□□□□□ -0.33
PTX3-201ENST00000295927 C8orf17Q9NRJ1 99 aa13.01□□□□□ -0.33
PTX3-201ENST00000295927 OCR1Q9BZK8 76 aa13□□□□□ -0.33
PTX3-201ENST00000295927 LRP1Q07954 4544 aaKnown RBP12.96□□□□□ -0.33
PTX3-201ENST00000295927 hDV103S1A0JD37 113 aa12.96□□□□□ -0.33
PTX3-201ENST00000295927 NOTCH2NLQ7Z3S9 236 aa12.96□□□□□ -0.33
PTX3-201ENST00000295927 KRTAP10-8P60410 259 aa12.96□□□□□ -0.34
PTX3-201ENST00000295927 TNXBP22105 4242 aa12.91□□□□□ -0.34
PTX3-201ENST00000295927 FAT3Q8TDW7 4589 aa12.9□□□□□ -0.35
PTX3-201ENST00000295927 C8orf87E5RJ46 101 aa12.88□□□□□ -0.35
PTX3-201ENST00000295927 FLG2Q5D862 2391 aaPredicted RBP12.88□□□□□ -0.35
PTX3-201ENST00000295927 TMEM254Q8TBM7 123 aa12.86□□□□□ -0.35
PTX3-201ENST00000295927 MRPL34Q9BQ48 92 aaKnown RBP12.85□□□□□ -0.35
PTX3-201ENST00000295927 LINC00313P59037 77 aa12.84□□□□□ -0.35
PTX3-201ENST00000295927 C20orf197Q8N268 126 aa12.84□□□□□ -0.35
PTX3-201ENST00000295927 KRTAP4-5Q9BYR2 181 aa12.81□□□□□ -0.36
PTX3-201ENST00000295927 CYSTM1Q9H1C7 97 aa12.78□□□□□ -0.36
PTX3-201ENST00000295927 NDUFS5O43920 106 aa12.77□□□□□ -0.37
PTX3-201ENST00000295927 MT1HL1P0DM35 61 aa12.77□□□□□ -0.37
PTX3-201ENST00000295927 RETNLBQ9BQ08 111 aa12.77□□□□□ -0.37
PTX3-201ENST00000295927 MYCBP2O75592 4640 aa12.76□□□□□ -0.37
PTX3-201ENST00000295927 SNURFQ9Y675 71 aa12.76□□□□□ -0.37
PTX3-201ENST00000295927 C5orf47Q569G3 176 aa12.75□□□□□ -0.37
PTX3-201ENST00000295927 KLKP1Q107X0 134 aa12.74□□□□□ -0.37
PTX3-201ENST00000295927 TP53AIP1Q9HCN2 124 aa12.74□□□□□ -0.37
PTX3-201ENST00000295927 KRTAP16-1A8MUX0 517 aa12.72□□□□□ -0.37
PTX3-201ENST00000295927 A0A0U1RQV1 116 aa12.71□□□□□ -0.37
PTX3-201ENST00000295927 BIRC6Q9NR09 4857 aa12.69□□□□□ -0.38
PTX3-201ENST00000295927 OXTP01178 125 aa12.69□□□□□ -0.38
PTX3-201ENST00000295927 H0Y9P7 68 aa12.67□□□□□ -0.38
PTX3-201ENST00000295927 Q8N9P0 234 aaPredicted RBP12.67□□□□□ -0.38
PTX3-201ENST00000295927 DMBT1Q9UGM3 2413 aaPredicted RBP12.66□□□□□ -0.38
PTX3-201ENST00000295927 MP68P56378 58 aa12.66□□□□□ -0.38
PTX3-201ENST00000295927 TRAV22A0A0B4J277 110 aa12.65□□□□□ -0.38
PTX3-201ENST00000295927 ZCCHC13Q8WW36 166 aaKnown RBP12.61□□□□□ -0.39
PTX3-201ENST00000295927 LINC00208Q96KT6 92 aa12.6□□□□□ -0.39
PTX3-201ENST00000295927 C9orf92A6NGG3 77 aa12.6□□□□□ -0.39
PTX3-201ENST00000295927 H7BZZ5 65 aa12.59□□□□□ -0.39
PTX3-201ENST00000295927 H3BPC8 53 aa12.57□□□□□ -0.4
PTX3-201ENST00000295927 Q5W150 140 aa12.57□□□□□ -0.4
PTX3-201ENST00000295927 HERC2O95714 4834 aa12.57□□□□□ -0.4
PTX3-201ENST00000295927 NDUFC1O43677 76 aa12.56□□□□□ -0.4
PTX3-201ENST00000295927 FP248Q71RG6 208 aaPredicted RBP12.55□□□□□ -0.4
PTX3-201ENST00000295927 C1orf64Q8NEQ6 169 aa12.54□□□□□ -0.4
PTX3-201ENST00000295927 KRTAP13-3Q3SY46 172 aa12.54□□□□□ -0.4
PTX3-201ENST00000295927 ABCA13Q86UQ4 5058 aa12.53□□□□□ -0.4
PTX3-201ENST00000295927 TMEM258P61165 79 aa12.51□□□□□ -0.41
PTX3-201ENST00000295927 IGLV7-46A0A075B6I9 117 aa12.47□□□□□ -0.41
PTX3-201ENST00000295927 C20orf166-AS1Q96NR2 134 aa12.45□□□□□ -0.42
PTX3-201ENST00000295927 A8MUU9 505 aa12.44□□□□□ -0.42
PTX3-201ENST00000295927 LOC101927531A0A1B0GV80 90 aa12.4□□□□□ -0.42
PTX3-201ENST00000295927 FAM236DA0A1B0GTK5 79 aa12.39□□□□□ -0.43
PTX3-201ENST00000295927 FAM236CP0DP71 79 aa12.39□□□□□ -0.43
PTX3-201ENST00000295927 PRR4Q16378 134 aa12.38□□□□□ -0.43
PTX3-201ENST00000295927 J3QL48 77 aa12.37□□□□□ -0.43
PTX3-201ENST00000295927 PCOTHQ58A44 107 aa12.34□□□□□ -0.43
PTX3-201ENST00000295927 CYP4F30PQ9H0H9 118 aa12.33□□□□□ -0.44
PTX3-201ENST00000295927 Q75L30 129 aa12.33□□□□□ -0.44
PTX3-201ENST00000295927 IGKV2-30P06310 120 aa12.31□□□□□ -0.44
PTX3-201ENST00000295927 ATP5EP56381 51 aaPredicted RBP12.29□□□□□ -0.44
PTX3-201ENST00000295927 XP32Q5T750 250 aa12.27□□□□□ -0.44
PTX3-201ENST00000295927 IGKV2D-30A0A075B6S6 120 aa12.25□□□□□ -0.45
PTX3-201ENST00000295927 SPANXA2-OT1Q8N9U9 137 aa12.25□□□□□ -0.45
PTX3-201ENST00000295927 TPRXLQ17RH7 258 aa12.21□□□□□ -0.45
PTX3-201ENST00000295927 RPL37P61927 97 aaKnown RBP12.21□□□□□ -0.46
PTX3-201ENST00000295927 C7orf65Q6ZTY9 151 aa12.16□□□□□ -0.46
PTX3-201ENST00000295927 ATP11AUNQ6ZP68 121 aa12.15□□□□□ -0.46
PTX3-201ENST00000295927 HRES1P13985 223 aa12.14□□□□□ -0.47
PTX3-201ENST00000295927 SERP1Q9Y6X1 66 aa12.13□□□□□ -0.47
PTX3-201ENST00000295927 RPS28P62857 69 aaKnown RBP12.12□□□□□ -0.47
PTX3-201ENST00000295927 PCLOQ9Y6V0 5065 aa12.06□□□□□ -0.48
PTX3-201ENST00000295927 SPINK7P58062 85 aa12.06□□□□□ -0.48
PTX3-201ENST00000295927 LPAP08519 4548 aa12.06□□□□□ -0.48
PTX3-201ENST00000295927 LRP2P98164 4655 aa11.99□□□□□ -0.49
PTX3-201ENST00000295927 DMAC1Q96GE9 116 aa11.95□□□□□ -0.5
PTX3-201ENST00000295927 C4orf26Q17RF5 130 aa11.94□□□□□ -0.5
PTX3-201ENST00000295927 COA5Q86WW8 74 aa11.91□□□□□ -0.5
PTX3-201ENST00000295927 ACYP2P14621 99 aa11.89□□□□□ -0.51
PTX3-201ENST00000295927 SMIM26A0A096LP01 95 aa11.82□□□□□ -0.52
PTX3-201ENST00000295927 HERC1Q15751 4861 aa11.8□□□□□ -0.52
PTX3-201ENST00000295927 A8MUN3 132 aa11.78□□□□□ -0.52
PTX3-201ENST00000295927 SEC61BP60468 96 aaKnown RBP11.78□□□□□ -0.52
PTX3-201ENST00000295927 KRTAP3-1Q9BYR8 98 aa11.78□□□□□ -0.52
PTX3-201ENST00000295927 COX6B2Q6YFQ2 88 aa11.76□□□□□ -0.53
PTX3-201ENST00000295927 SVIPQ8NHG7 77 aa11.74□□□□□ -0.53
PTX3-201ENST00000295927 CHKB-CPT1BH3BT56 60 aa11.7□□□□□ -0.54
PTX3-201ENST00000295927 HMCN2Q8NDA2 5059 aa11.68□□□□□ -0.54
PTX3-201ENST00000295927 MPLKIPQ8TAP9 179 aa11.66□□□□□ -0.54
PTX3-201ENST00000295927 MUC17Q685J3 4493 aa11.63□□□□□ -0.55
PTX3-201ENST00000295927 KRTAP4-1Q9BYQ7 146 aa11.58□□□□□ -0.55
PTX3-201ENST00000295927 Q1T7F1 81 aa11.58□□□□□ -0.56
PTX3-201ENST00000295927 RBM12B-AS1Q9P1G2 102 aa11.53□□□□□ -0.56
PTX3-201ENST00000295927 V9GYY9 64 aa11.5□□□□□ -0.57
PTX3-201ENST00000295927 H1FX-AS1Q4G0G2 97 aa11.45□□□□□ -0.58
PTX3-201ENST00000295927 LINC01558Q9Y6Z2 57 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 93.1 ms