RNA–Protein interactions for RNA: ENST00000286627.10

KCNMA1-201, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene KCNMA1, Length 6,194 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-201ENST00000286627 REV3LO60673 3130 aa9.23□□□□□ -0.93
KCNMA1-201ENST00000286627 KRTAP21-3Q3LHN1 58 aa9.22□□□□□ -0.93
KCNMA1-201ENST00000286627 ZZEF1O43149 2961 aa9.19□□□□□ -0.94
KCNMA1-201ENST00000286627 CELSR2Q9HCU4 2923 aa9.18□□□□□ -0.94
KCNMA1-201ENST00000286627 BOD1L1Q8NFC6 3051 aa9.18□□□□□ -0.94
KCNMA1-201ENST00000286627 A0A0A0MQY5 61 aa9.17□□□□□ -0.94
KCNMA1-201ENST00000286627 SZT2Q5T011 3432 aa9.13□□□□□ -0.95
KCNMA1-201ENST00000286627 VCANP13611 3396 aa9.11□□□□□ -0.95
KCNMA1-201ENST00000286627 ZANQ9Y493 2812 aa9.09□□□□□ -0.95
KCNMA1-201ENST00000286627 A8MUU9 505 aa9.09□□□□□ -0.95
KCNMA1-201ENST00000286627 DCHS2Q6V1P9 2916 aa9.07□□□□□ -0.96
KCNMA1-201ENST00000286627 A6NN06 94 aa9.06□□□□□ -0.96
KCNMA1-201ENST00000286627 H3BS24 57 aa9.05□□□□□ -0.96
KCNMA1-201ENST00000286627 A8MU10 97 aa9.05□□□□□ -0.96
KCNMA1-201ENST00000286627 EYSQ5T1H1 3165 aa9.02□□□□□ -0.97
KCNMA1-201ENST00000286627 C20orf166-AS1Q96NR2 134 aa9.02□□□□□ -0.97
KCNMA1-201ENST00000286627 CRYBG3Q68DQ2 2970 aa9.02□□□□□ -0.97
KCNMA1-201ENST00000286627 KRTAP25-1Q3LHN0 102 aa8.97□□□□□ -0.97
KCNMA1-201ENST00000286627 COL6A3P12111 3177 aa8.95□□□□□ -0.98
KCNMA1-201ENST00000286627 KRTAP1-4P0C5Y4 121 aa8.92□□□□□ -0.98
KCNMA1-201ENST00000286627 DNAH14Q0VDD8 3507 aa8.89□□□□□ -0.99
KCNMA1-201ENST00000286627 HRNRQ86YZ3 2850 aaPredicted RBP8.88□□□□□ -0.99
KCNMA1-201ENST00000286627 TENM3Q9P273 2699 aa8.87□□□□□ -0.99
KCNMA1-201ENST00000286627 CFAP47Q6ZTR5 3102 aa8.86□□□□□ -0.99
KCNMA1-201ENST00000286627 NF1P21359 2839 aa8.83□□□□□ -1
KCNMA1-201ENST00000286627 TNRC18O15417 2968 aaPredicted RBP8.81□□□□□ -1
KCNMA1-201ENST00000286627 FBN2P35556 2912 aa8.81□□□□□ -1
KCNMA1-201ENST00000286627 XP32Q5T750 250 aa8.78□□□□□ -1
KCNMA1-201ENST00000286627 TENM1Q9UKZ4 2725 aa8.78□□□□□ -1
KCNMA1-201ENST00000286627 DMXL1Q9Y485 3027 aa8.77□□□□□ -1
KCNMA1-201ENST00000286627 TNP1P09430 55 aa8.75□□□□□ -1.01
KCNMA1-201ENST00000286627 A0A1B0GVY2 172 aa8.69□□□□□ -1.02
KCNMA1-201ENST00000286627 KRTAP16-1A8MUX0 517 aa8.67□□□□□ -1.02
KCNMA1-201ENST00000286627 USP34Q70CQ2 3546 aa8.67□□□□□ -1.02
KCNMA1-201ENST00000286627 TPRXLQ17RH7 258 aa8.66□□□□□ -1.02
KCNMA1-201ENST00000286627 MXRA5Q9NR99 2828 aa8.62□□□□□ -1.03
KCNMA1-201ENST00000286627 TENM2Q9NT68 2774 aa8.6□□□□□ -1.03
KCNMA1-201ENST00000286627 SPEGQ15772 3267 aa8.6□□□□□ -1.03
KCNMA1-201ENST00000286627 PP632Q6XCG6 107 aa8.56□□□□□ -1.04
KCNMA1-201ENST00000286627 NDUFAF8A1L188 74 aa8.56□□□□□ -1.04
KCNMA1-201ENST00000286627 CELSR1Q9NYQ6 3014 aa8.55□□□□□ -1.04
KCNMA1-201ENST00000286627 LOC400499M0QZD8 3231 aa8.55□□□□□ -1.04
KCNMA1-201ENST00000286627 H0YAA0 97 aa8.53□□□□□ -1.04
KCNMA1-201ENST00000286627 KRTAP13-3Q3SY46 172 aa8.52□□□□□ -1.04
KCNMA1-201ENST00000286627 KRTAP10-8P60410 259 aa8.52□□□□□ -1.05
KCNMA1-201ENST00000286627 SPTBN5Q9NRC6 3674 aaKnown RBP8.51□□□□□ -1.05
KCNMA1-201ENST00000286627 C10orf95Q9H7T3 257 aa8.5□□□□□ -1.05
KCNMA1-201ENST00000286627 TGP01266 2768 aa8.47□□□□□ -1.05
KCNMA1-201ENST00000286627 PKD1L1Q8TDX9 2849 aa8.45□□□□□ -1.06
KCNMA1-201ENST00000286627 P0C880 135 aa8.36□□□□□ -1.07
KCNMA1-201ENST00000286627 KRTAP10-10P60014 251 aa8.36□□□□□ -1.07
KCNMA1-201ENST00000286627 MYO15AQ9UKN7 3530 aa8.33□□□□□ -1.08
KCNMA1-201ENST00000286627 PDZD2O15018 2839 aa8.31□□□□□ -1.08
KCNMA1-201ENST00000286627 VWFP04275 2813 aa8.28□□□□□ -1.08
KCNMA1-201ENST00000286627 DCHS1Q96JQ0 3298 aa8.25□□□□□ -1.09
KCNMA1-201ENST00000286627 PRO2289Q9P1D8 64 aa8.23□□□□□ -1.09
KCNMA1-201ENST00000286627 RELNP78509 3460 aa8.14□□□□□ -1.11
KCNMA1-201ENST00000286627 FBN1P35555 2871 aaKnown RBP8.11□□□□□ -1.11
KCNMA1-201ENST00000286627 WDFY3Q8IZQ1 3526 aa8.08□□□□□ -1.12
KCNMA1-201ENST00000286627 OTOGQ6ZRI0 2925 aa8.06□□□□□ -1.12
KCNMA1-201ENST00000286627 KRTAP12-2P59991 146 aa8□□□□□ -1.13
KCNMA1-201ENST00000286627 SRRM2Q9UQ35 2752 aaKnown RBP7.99□□□□□ -1.13
KCNMA1-201ENST00000286627 KRTAP3-1Q9BYR8 98 aa7.97□□□□□ -1.13
KCNMA1-201ENST00000286627 KRTAP12-1P59990 96 aa7.92□□□□□ -1.14
KCNMA1-201ENST00000286627 KRTAP13-4Q3LI77 160 aa7.92□□□□□ -1.14
KCNMA1-201ENST00000286627 FBN3Q75N90 2809 aa7.91□□□□□ -1.14
KCNMA1-201ENST00000286627 NBPF19A0A087WUL8 3843 aa7.79□□□□□ -1.16
KCNMA1-201ENST00000286627 LAMA5O15230 3695 aa7.78□□□□□ -1.16
KCNMA1-201ENST00000286627 MEGF8Q7Z7M0 2845 aa7.77□□□□□ -1.16
KCNMA1-201ENST00000286627 KRTAP10-6P60371 365 aaPredicted RBP7.75□□□□□ -1.17
KCNMA1-201ENST00000286627 ASPMQ8IZT6 3477 aa7.73□□□□□ -1.17
KCNMA1-201ENST00000286627 ZFHX3Q15911 3703 aa7.73□□□□□ -1.17
KCNMA1-201ENST00000286627 ZFHX4Q86UP3 3567 aa7.7□□□□□ -1.18
KCNMA1-201ENST00000286627 COL7A1Q02388 2944 aa7.7□□□□□ -1.18
KCNMA1-201ENST00000286627 MT1HL1P0DM35 61 aa7.68□□□□□ -1.18
KCNMA1-201ENST00000286627 ANK3Q12955 4377 aaKnown RBP7.66□□□□□ -1.18
KCNMA1-201ENST00000286627 CSMD1Q96PZ7 3565 aa7.59□□□□□ -1.19
KCNMA1-201ENST00000286627 KRTAP10-4P60372 401 aaPredicted RBP7.52□□□□□ -1.21
KCNMA1-201ENST00000286627 KRTAP15-1Q3LI76 137 aa7.5□□□□□ -1.21
KCNMA1-201ENST00000286627 KRTAP3-2Q9BYR7 98 aa7.48□□□□□ -1.21
KCNMA1-201ENST00000286627 SMG1Q96Q15 3661 aaKnown RBP7.48□□□□□ -1.21
KCNMA1-201ENST00000286627 KRTAP3-3Q9BYR6 98 aa7.48□□□□□ -1.21
KCNMA1-201ENST00000286627 CRCT1Q9UGL9 99 aa7.47□□□□□ -1.21
KCNMA1-201ENST00000286627 MUC3AQ02505 3323 aa7.47□□□□□ -1.21
KCNMA1-201ENST00000286627 TRRAPQ9Y4A5 3859 aa7.45□□□□□ -1.22
KCNMA1-201ENST00000286627 DMDP11532 3685 aa7.43□□□□□ -1.22
KCNMA1-201ENST00000286627 CSMD2Q7Z408 3487 aa7.41□□□□□ -1.22
KCNMA1-201ENST00000286627 SVEP1Q4LDE5 3571 aa7.32□□□□□ -1.24
KCNMA1-201ENST00000286627 KRTAP4-5Q9BYR2 181 aa7.32□□□□□ -1.24
KCNMA1-201ENST00000286627 KRTAP10-12P60413 245 aa7.25□□□□□ -1.25
KCNMA1-201ENST00000286627 CUBNO60494 3623 aa7.24□□□□□ -1.25
KCNMA1-201ENST00000286627 HUWE1Q7Z6Z7 4374 aaKnown RBP7.23□□□□□ -1.25
KCNMA1-201ENST00000286627 SPENQ96T58 3664 aaKnown RBP7.21□□□□□ -1.25
KCNMA1-201ENST00000286627 KRTAP23-1A1A580 65 aa7.12□□□□□ -1.27
KCNMA1-201ENST00000286627 KRTAP12-3P60328 96 aa7.06□□□□□ -1.28
KCNMA1-201ENST00000286627 INE1O15225 51 aa7.05□□□□□ -1.28
KCNMA1-201ENST00000286627 ALMS1Q8TCU4 4167 aa7.02□□□□□ -1.29
KCNMA1-201ENST00000286627 BSNQ9UPA5 3926 aa7.02□□□□□ -1.29
KCNMA1-201ENST00000286627 LORP23490 312 aaPredicted RBP6.99□□□□□ -1.29
KCNMA1-201ENST00000286627 LCE3AQ5TA76 89 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms