RNA–Protein interactions for RNA: ENST00000285681.6

USP25-202, Transcript of ubiquitin specific peptidase 25, humanhuman

TSL 1 (best) BASIC

Gene USP25, Length 5,216 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP25-202ENST00000285681 SPATA8Q6RVD6 105 aa11.43□□□□□ -0.58
USP25-202ENST00000285681 BOD1L1Q8NFC6 3051 aa11.42□□□□□ -0.58
USP25-202ENST00000285681 ASH1LQ9NR48 2969 aaKnown RBP11.41□□□□□ -0.58
USP25-202ENST00000285681 CRYBG3Q68DQ2 2970 aa11.4□□□□□ -0.58
USP25-202ENST00000285681 ZZEF1O43149 2961 aa11.38□□□□□ -0.59
USP25-202ENST00000285681 VCANP13611 3396 aa11.37□□□□□ -0.59
USP25-202ENST00000285681 CELSR2Q9HCU4 2923 aa11.36□□□□□ -0.59
USP25-202ENST00000285681 NBEAQ8NFP9 2946 aa11.33□□□□□ -0.6
USP25-202ENST00000285681 EYSQ5T1H1 3165 aa11.31□□□□□ -0.6
USP25-202ENST00000285681 A8MUU9 505 aa11.25□□□□□ -0.61
USP25-202ENST00000285681 DCHS2Q6V1P9 2916 aa11.23□□□□□ -0.61
USP25-202ENST00000285681 C20orf166-AS1Q96NR2 134 aa11.22□□□□□ -0.61
USP25-202ENST00000285681 ZANQ9Y493 2812 aa11.2□□□□□ -0.62
USP25-202ENST00000285681 COL6A3P12111 3177 aa11.2□□□□□ -0.62
USP25-202ENST00000285681 DNAH14Q0VDD8 3507 aa11.11□□□□□ -0.63
USP25-202ENST00000285681 A0A0A0MQY5 61 aa11.11□□□□□ -0.63
USP25-202ENST00000285681 CFAP47Q6ZTR5 3102 aa11.1□□□□□ -0.63
USP25-202ENST00000285681 TNRC18O15417 2968 aaPredicted RBP11.09□□□□□ -0.63
USP25-202ENST00000285681 A8MU10 97 aa11.08□□□□□ -0.64
USP25-202ENST00000285681 TENM3Q9P273 2699 aa11.02□□□□□ -0.64
USP25-202ENST00000285681 KRTAP1-4P0C5Y4 121 aa11.02□□□□□ -0.64
USP25-202ENST00000285681 NF1P21359 2839 aa10.98□□□□□ -0.65
USP25-202ENST00000285681 DMXL1Q9Y485 3027 aa10.97□□□□□ -0.65
USP25-202ENST00000285681 TENM1Q9UKZ4 2725 aa10.93□□□□□ -0.66
USP25-202ENST00000285681 XP32Q5T750 250 aa10.92□□□□□ -0.66
USP25-202ENST00000285681 HRNRQ86YZ3 2850 aaPredicted RBP10.89□□□□□ -0.67
USP25-202ENST00000285681 USP34Q70CQ2 3546 aa10.88□□□□□ -0.67
USP25-202ENST00000285681 FBN2P35556 2912 aa10.85□□□□□ -0.67
USP25-202ENST00000285681 SPEGQ15772 3267 aa10.82□□□□□ -0.68
USP25-202ENST00000285681 TENM2Q9NT68 2774 aa10.81□□□□□ -0.68
USP25-202ENST00000285681 KRTAP25-1Q3LHN0 102 aa10.81□□□□□ -0.68
USP25-202ENST00000285681 A6NN06 94 aa10.8□□□□□ -0.68
USP25-202ENST00000285681 TNP1P09430 55 aa10.8□□□□□ -0.68
USP25-202ENST00000285681 H3BS24 57 aa10.77□□□□□ -0.69
USP25-202ENST00000285681 TPRXLQ17RH7 258 aa10.77□□□□□ -0.69
USP25-202ENST00000285681 SPTBN5Q9NRC6 3674 aaKnown RBP10.76□□□□□ -0.69
USP25-202ENST00000285681 MXRA5Q9NR99 2828 aa10.7□□□□□ -0.7
USP25-202ENST00000285681 A0A1B0GVY2 172 aa10.66□□□□□ -0.7
USP25-202ENST00000285681 LOC400499M0QZD8 3231 aa10.63□□□□□ -0.71
USP25-202ENST00000285681 PKD1L1Q8TDX9 2849 aa10.6□□□□□ -0.71
USP25-202ENST00000285681 CELSR1Q9NYQ6 3014 aa10.59□□□□□ -0.71
USP25-202ENST00000285681 KRTAP16-1A8MUX0 517 aa10.58□□□□□ -0.72
USP25-202ENST00000285681 KRTAP10-8P60410 259 aa10.58□□□□□ -0.72
USP25-202ENST00000285681 KRTAP13-3Q3SY46 172 aa10.58□□□□□ -0.72
USP25-202ENST00000285681 KRTAP10-10P60014 251 aa10.48□□□□□ -0.73
USP25-202ENST00000285681 MYO15AQ9UKN7 3530 aa10.46□□□□□ -0.74
USP25-202ENST00000285681 PP632Q6XCG6 107 aa10.42□□□□□ -0.74
USP25-202ENST00000285681 C10orf95Q9H7T3 257 aa10.4□□□□□ -0.74
USP25-202ENST00000285681 DCHS1Q96JQ0 3298 aa10.37□□□□□ -0.75
USP25-202ENST00000285681 VWFP04275 2813 aa10.37□□□□□ -0.75
USP25-202ENST00000285681 TGP01266 2768 aa10.35□□□□□ -0.75
USP25-202ENST00000285681 H0YAA0 97 aa10.35□□□□□ -0.75
USP25-202ENST00000285681 NDUFAF8A1L188 74 aa10.33□□□□□ -0.76
USP25-202ENST00000285681 PRO2289Q9P1D8 64 aa10.28□□□□□ -0.76
USP25-202ENST00000285681 P0C880 135 aa10.27□□□□□ -0.77
USP25-202ENST00000285681 PDZD2O15018 2839 aa10.26□□□□□ -0.77
USP25-202ENST00000285681 RELNP78509 3460 aa10.23□□□□□ -0.77
USP25-202ENST00000285681 WDFY3Q8IZQ1 3526 aa10.13□□□□□ -0.79
USP25-202ENST00000285681 FBN1P35555 2871 aaKnown RBP10.09□□□□□ -0.79
USP25-202ENST00000285681 OTOGQ6ZRI0 2925 aa10.06□□□□□ -0.8
USP25-202ENST00000285681 SRRM2Q9UQ35 2752 aaKnown RBP10.01□□□□□ -0.81
USP25-202ENST00000285681 NBPF19A0A087WUL8 3843 aa9.92□□□□□ -0.82
USP25-202ENST00000285681 ZFHX3Q15911 3703 aa9.85□□□□□ -0.83
USP25-202ENST00000285681 LAMA5O15230 3695 aa9.82□□□□□ -0.84
USP25-202ENST00000285681 KRTAP12-2P59991 146 aa9.78□□□□□ -0.84
USP25-202ENST00000285681 ASPMQ8IZT6 3477 aa9.78□□□□□ -0.84
USP25-202ENST00000285681 FBN3Q75N90 2809 aa9.73□□□□□ -0.85
USP25-202ENST00000285681 KRTAP3-1Q9BYR8 98 aa9.73□□□□□ -0.85
USP25-202ENST00000285681 ZFHX4Q86UP3 3567 aa9.7□□□□□ -0.86
USP25-202ENST00000285681 KRTAP13-4Q3LI77 160 aa9.67□□□□□ -0.86
USP25-202ENST00000285681 KRTAP12-1P59990 96 aa9.65□□□□□ -0.86
USP25-202ENST00000285681 ANK3Q12955 4377 aaKnown RBP9.61□□□□□ -0.87
USP25-202ENST00000285681 MT1HL1P0DM35 61 aa9.58□□□□□ -0.88
USP25-202ENST00000285681 MEGF8Q7Z7M0 2845 aa9.55□□□□□ -0.88
USP25-202ENST00000285681 COL7A1Q02388 2944 aa9.53□□□□□ -0.88
USP25-202ENST00000285681 MUC3AQ02505 3323 aa9.49□□□□□ -0.89
USP25-202ENST00000285681 DMDP11532 3685 aa9.47□□□□□ -0.89
USP25-202ENST00000285681 CSMD1Q96PZ7 3565 aa9.44□□□□□ -0.9
USP25-202ENST00000285681 KRTAP10-6P60371 365 aaPredicted RBP9.41□□□□□ -0.9
USP25-202ENST00000285681 CSMD2Q7Z408 3487 aa9.37□□□□□ -0.91
USP25-202ENST00000285681 SMG1Q96Q15 3661 aaKnown RBP9.35□□□□□ -0.91
USP25-202ENST00000285681 TRRAPQ9Y4A5 3859 aa9.33□□□□□ -0.92
USP25-202ENST00000285681 KRTAP4-5Q9BYR2 181 aa9.32□□□□□ -0.92
USP25-202ENST00000285681 KRTAP10-4P60372 401 aaPredicted RBP9.31□□□□□ -0.92
USP25-202ENST00000285681 KRTAP15-1Q3LI76 137 aa9.27□□□□□ -0.93
USP25-202ENST00000285681 SVEP1Q4LDE5 3571 aa9.2□□□□□ -0.94
USP25-202ENST00000285681 KRTAP3-3Q9BYR6 98 aa9.11□□□□□ -0.95
USP25-202ENST00000285681 CUBNO60494 3623 aa9.09□□□□□ -0.95
USP25-202ENST00000285681 KRTAP3-2Q9BYR7 98 aa9.08□□□□□ -0.96
USP25-202ENST00000285681 SPENQ96T58 3664 aaKnown RBP9.06□□□□□ -0.96
USP25-202ENST00000285681 HUWE1Q7Z6Z7 4374 aaKnown RBP9.05□□□□□ -0.96
USP25-202ENST00000285681 KRTAP10-12P60413 245 aa8.98□□□□□ -0.97
USP25-202ENST00000285681 ALMS1Q8TCU4 4167 aa8.82□□□□□ -1
USP25-202ENST00000285681 BSNQ9UPA5 3926 aa8.78□□□□□ -1
USP25-202ENST00000285681 CRCT1Q9UGL9 99 aa8.75□□□□□ -1.01
USP25-202ENST00000285681 KRTAP12-3P60328 96 aa8.7□□□□□ -1.02
USP25-202ENST00000285681 DNAH5Q8TE73 4624 aa8.68□□□□□ -1.02
USP25-202ENST00000285681 LORP23490 312 aaPredicted RBP8.63□□□□□ -1.03
USP25-202ENST00000285681 DNAH9Q9NYC9 4486 aa8.63□□□□□ -1.03
USP25-202ENST00000285681 LCE3AQ5TA76 89 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 190 ms